Chiloscyllium plagiosum (whitespotted bambooshark): 122556000
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Entry
122556000 CDS
T08871
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122556000 (sox2)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122556000 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122556000
NCBI-ProteinID:
XP_043558292
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All DBs
Position
13:complement(50324724..50333488)
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AA seq
254 aa
AA seq
DB search
MYNMMETDLKPPAPQQTSGGTGNSNSAGNNAKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGANAMNAGVGVGVGAGVNQRMDGYAHMNGWANGGYSMMQEQLGYSQHQG
LNAHNVAQMQQMHRYDMSALQYNSMTSAQTYMNGSPTYSMSPAYTQQGTDQPTPSEEGLY
QPCQARLCRPGTWK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgatctcaaaccgcccgccccacaacaaacttcgggggga
acgggcaactccaactcggcgggaaacaacgcgaaaaacagcccagacagggtcaagaga
cccatgaatgcgtttatggtctggtccaggggccagcggcggaaaatggcccaagaaaac
cccaaaatgcacaattccgagatcagcaagaggctcggggcggagtggaaacttttatcc
gaggccgagaagaggccgttcatcgacgaggcgaagcggctgcgagccctgcacatgaag
gagcacccggattataaataccggccccggaggaaaaccaagaccctgatgaaaaaggac
aagtacactctgccgggcggcctgctggcgcccggcgccaatgcaatgaacgccggggtc
ggggtcggcgtcggcgctggagtcaaccagaggatggacggttacgcgcacatgaacggc
tgggcgaacgggggctacagcatgatgcaggaacagctcggctactctcagcaccagggc
ctgaacgctcacaacgtggcccagatgcagcagatgcaccgctacgatatgagcgcgctg
cagtacaactcaatgaccagcgctcagacctacatgaacggctcgcccacctacagcatg
tccccagcctacacgcagcaaggcacagatcagcctaccccgagcgaagagggactctat
caaccgtgtcaagcgcgtctttgccggccaggaacttggaaatag
DBGET
integrated database retrieval system
