Chiloscyllium plagiosum (whitespotted bambooshark): 122556010
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Entry
122556010 CDS
T08871
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122556010 (fxr1)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122556010 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
122556010 (fxr1)
mRNA cycle factors
Stress granule specific factors
122556010 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122556010
NCBI-ProteinID:
XP_043558296
LinkDB
All DBs
Position
13:complement(51144474..51254445)
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AA seq
682 aa
AA seq
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MEELTVEVRGSNGAFYKAFVKDVFEDSLAVTFENNWQPARRIPFCDVRLPPPSDLKKEIS
EGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTFERLRPMNPNKT
VTKNTFFKCTIDVPDDLREACAHENAHKDFKKATEADCIFYSADTGQLLVLSTKEATVKR
VSILSDMHLRSIRTKLMLVSRNEEATKHLESTKQLAAAFQEEFTVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEETGTFRIYGETEEAVQKARSYLEFVEDSVQVPRDLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDSRQPREEGMVPFTFVGTKESIGNVQVLLEYHISYLKE
VEQLRLDRLQIDEQLRQIGMGYRPVTSRPEKDKGYITDESTASSVHASRSYRGRGRRGPN
YTSGYGTNSELSNASETESEKRDELSDWSQAAEDDRDARPYRDSRRRPGAGRGRGGGQSN
RGRGGSRGGNSSISSVFRDPDSNPYSLLDNTETDQTADTDGSESHSSTNRRRRSRRRRTD
DDATMIDGMTESDSASVNENGLDDNERKPQRRNRSRRRRLRGQIESSLSRDSQPVTVADY
ISRAESQSRQRVQPKENLASSKNATTLQVQEDTIDEHFPAIKTVNGMNSVPGDEAHTHKV
SKESQQRDYQGNGTKVVVNGVS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttgacggtcgaagtgcgcggctccaatggagcattttacaaggcatttgta
aaagatgtgtttgaagattcacttgctgttacttttgagaacaattggcaaccagcacgt
cggattcctttctgtgatgtgcgattaccacccccttctgatctcaaaaaagagattagc
gaaggtgatgaggttgaggtttattctcgagcaaatgaacaagaaccatgtggatggtgg
cttgccagagttcggatgatgaaaggcgatttttatgtaattgaatatgctgcctgtgat
gcaacgtacaatgaaattgttacttttgagcgattacggccgatgaacccaaacaagaca
gttacgaagaatactttcttcaagtgcacaattgatgtccctgatgacttaagagaagcc
tgtgcacatgaaaatgcacataaggattttaagaaggcaactgaagcagattgcattttc
tacagtgctgacactggtcaattgttggttttgtctaccaaagaggccacagtgaaaaga
gtcagtattcttagtgatatgcacttacgaagtattcgcacaaagctcatgcttgtgtcc
aggaatgaagaagcaacaaaacatttggagagtactaagcagctcgcagctgctttccaa
gaggaattcactgtcagagaggatctcatgggtctggcaattggaacccatggttccaac
attcagcaagcaagaaaagttcctggtgtcacagcaatcgagcttgatgaagaaactggc
acttttaggatttatggagagactgaagaggcagttcaaaaggctcgaagttacctggag
tttgtggaggattccgttcaagttcccagagatttagtaggaaaagttatcggcaaaaat
ggtaaggtcattcaagagattgtggataagtctggagtagtaagagtacgaattgaaggt
gataacgacagcagacaacctcgggaagagggaatggtccctttcacttttgttggaaca
aaggaaagtattgggaatgtgcaggttctattggagtaccatatatcttatttgaaggaa
gtagaacaactgagactggaccgtttgcaaattgatgagcaacttcgacagattggtatg
ggatatcggccagtgacaagtcggccagagaaagataagggctatattacagacgagagt
actgcttcctcagttcatgccagcagatcatatcgtggccgtggtcgtcgagggccaaat
tatacgtctggttatggtacaaattcagaattatcaaatgcttccgagactgaatctgaa
aaaagggatgaattaagtgattggtcacaggctgctgaagatgaccgggatgcaagacca
tatcgtgatagtcgaaggcggcctggagcagggagagggcgaggtggaggacagtccaac
agaggtcgtgggggatcacgaggtggaaattcatccattagctcagtgtttagagatcca
gatagcaatccttacagtttgctagacaacacagaaacggatcaaacagcagacactgat
ggtagtgagtctcacagcagcacaaatcgccgcaggagatcacgtaggcgtaggacagat
gatgatgccactatgattgatggaatgacagaatctgacagtgcttcagtgaatgagaat
ggtttagatgataatgaacgaaaaccacagcggcgtaatcgtagccgcaggcgtcgttta
cgtggtcaaattgaaagctcattgagcagagacagccagccagtaactgtagctgattac
atatctcgagcggaatcacagagccgacaacgggtccagcctaaagagaatcttgcatcc
agcaaaaatgcaactacgttgcaggtgcaagaagatacgattgatgaacattttcctgct
atcaagaccgttaatggaatgaacagtgtacctggtgatgaagctcatacacacaaggtt
tcgaaggaaagccaacaaagagattaccaaggaaatggaactaaagttgtggtgaatggt
gtttcttaa
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