Chiloscyllium plagiosum (whitespotted bambooshark): 122556033
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Entry
122556033 CDS
T08871
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122556033
Enzymes [BR:
cpla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
122556033
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
122556033
Prokaryotic type
122556033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
122556033
NCBI-ProteinID:
XP_043558343
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All DBs
Position
13:complement(52699769..52733889)
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AA seq
581 aa
AA seq
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MSKNGKQTDRNAKDSEHEKKIEEKSNKKETAFSSSSNSLKTSTKKSTKKRNHNNSSREDS
PKLQAKGKRTVEERPPGLIERKLSNSRINKKRKTEHQAETSLSGEGNLLKSINKSRLATA
KSVEEFNFNEKRIRLLSKTESVRENSWGIIYWMSRDQRVQDNWAFLYAQRIALKHKLPLH
VCFCLVPKFLDATIRHFGFMLKGLQEVAEECKQLNISFHLLIGFAKDVLPEFVKGHNIGG
IVTDFSPLRLPLEWIEDVRHNLPENLPIIQVDAHNIVPCWVTSDKQEYSARTIRKKIHDK
LPQFLTDFPPVIQHPFSSSLKAQLIDWDAAAANLEVDRTVKEVDWAKSGTAAGLIRMESF
IKEQLQHFSTDRNNPNKTALSNMSPWFHFGQVSVQRTILEIKKYRNKFKDSVDSYIEEAV
VRRELADNFCFYNKQYDKIEGASDWAHKTLKMHSKDQRQYLYTLKELEDGRTHDSLWNAA
QLQMIHEGKMHGFLRMYWAKKILEWTTSPEEALRFSIYLNDRYELDGRDPNGYVGCMWSI
CGIHDQGWKERPVFGKIRYMNYNGCKRKFDIGQFERKYSYN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaatgggaaacaaaccgacaggaatgctaaagattctgagcatgagaaaaaa
attgaagagaaatcaaataaaaaggaaactgcattttccagctcctccaacagtctgaaa
acatccacgaaaaaatcaacgaagaaacgcaatcataataactccagtcgggaagattcc
ccaaagctccaagctaagggaaagagaacagtggaagagagacctccaggattgattgag
aggaaattgtccaattcgaggatcaataaaaagaggaaaactgaacaccaggctgagaca
tctctttctggagaaggaaatctgttgaaaagtatcaataagtcacgtttggccacagca
aaatcagtggaagagtttaattttaacgaaaaacgcatccgtctcctttctaaaacagag
agtgtcagggaaaactcttggggaattatttactggatgtcccgtgaccagcgagtacag
gataactgggctttcttatatgcacaacggatagctcttaagcataaacttccgctccat
gtctgcttctgtctggtgcccaaattcctagatgccaccatccgccattttggtttcatg
ctaaagggactccaagaagttgctgaggaatgtaagcagctgaatatttctttccatctg
ctcattggttttgccaaagatgtgctgccagagtttgtgaaagggcacaacattggaggg
atagttacagatttctctccattgcgtctcccactggagtggatcgaggatgtaagacac
aacctaccagaaaatttaccaattattcaggtcgatgctcacaatattgtaccctgctgg
gtaacttcagacaaacaagagtacagtgccagaacaatcaggaagaaaattcatgataaa
ctccctcagttcctgacggactttcctccagttatccaacatccttttagctcatccttg
aaagcacagttgattgattgggatgcagctgcagcaaaccttgaagtggatcgcacagtg
aaggaagttgattgggctaaatcagggactgcagcagggctaattaggatggagtcattc
attaaggagcagcttcagcatttcagcactgacagaaacaatccaaataaaactgccttg
agtaatatgtcaccgtggtttcactttggtcaggtttcagttcagcgaaccattctggag
ataaagaaataccgcaacaagtttaaggacagtgtggacagttacattgaagaagctgta
gtgcgacgggagctggcagacaacttttgtttttacaataaacaatatgacaagattgaa
ggtgcttctgactgggcccataaaactttgaaaatgcacagcaaagaccaacggcagtat
ctttatacactgaaagaactggaagacgggcgaacacatgattccttgtggaatgcagca
cagcttcagatgatccatgaggggaagatgcatggttttcttcgaatgtactgggctaaa
aagattctggaatggactacttctcctgaggaagccttgaggttctccatctacctgaac
gatcgctatgaactggatggcagagatccaaatggatacgtaggttgcatgtggtcaatc
tgtggaattcacgaccaaggctggaaagagcgacctgtttttggcaagattcgctacatg
aattataatggttgtaagaggaaatttgacattggtcagtttgaaagaaaatacagttac
aattag
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