Chiloscyllium plagiosum (whitespotted bambooshark): 122556101
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Entry
122556101 CDS
T08871
Symbol
abcf3
Name
(RefSeq) ATP-binding cassette sub-family F member 3 isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cpla03012
]
122556101 (abcf3)
Translation factors [BR:
cpla03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122556101 (abcf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
AAA_24
NACHT
AAA
MobB
AAA_30
nSTAND3
AAA_28
RsgA_GTPase
DUF1672
ORC-CDC6-like
AAA_16
TsaE
ATP-synt_ab
Arf
AAA_23
Roc
NPHP3_N
DO-GTPase2
AAA_15
Motif
Other DBs
NCBI-GeneID:
122556101
NCBI-ProteinID:
XP_043558496
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All DBs
Position
13:59440491..59543056
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AA seq
710 aa
AA seq
DB search
MATYVEIIRHEFPDIDSELFQYVTGVLDSSAADFESVDEIFDAVGDVLQEVSVSKNKDDV
REICQKMFNTLKLNTSNSSKSNVLLKAPIQLSQMTGHADHKTEDVKGIWMMRRDLGTTVD
AKKLEKAEARLKAKQEKRTEKNSQKTANPLILEEASASQASNKKESRLEASGKNKSYDIK
IENFDVSYGDRSLLTGADLHLAYGRRYGLVGRNGLGKTTLLKMMSARSLRIPSHISILHV
EQEVVGDDTQALKSVLECDTVRESLLQKEKELTTKLNSGVGDGTESSKLTEIYAKLEEIE
ADKAPARASVILAGLGFSSKMQQQMTREFSGGWRMRLALARALFAKPDLLLLDEPTNMLD
VRAILWLENYLQTWQSTILVVSHDRNFLNAVATDIVHLHSQRLETYRGDYENFVKTKEER
LKNQQREYEAQQQYREHIQVFIDRFRYNANRASQVQSKLKLLEKLPELKPLEKELEVTLR
FPDNFEKLSPPILQLTEVDFSYTPEHRIFINLSVSADQDSRICIVGENGAGKTTLLKILL
GDLTPNQGIRHAHRNLKIGYFSQHHVDQLEMNVSSVELLASKFPGRPEEEYRHQLGGYGI
SGDLAVRPVASLSGGQKSRVAFAQMTMAQPNFYILDEPTNHLDMETIEALGNALQKFKGG
VILVSHDERLIRMVCKELWVCGCGTVKRVDGGFDEYKDILQEQFRKEGFL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttatgtagaaatcatccggcacgagttccccgacatcgactccgagcttttc
caatacgtgacaggtgttctggatagcagtgctgctgattttgaatctgttgatgaaatt
tttgatgcagttggtgatgttctgcaagaagtgtcagtttcaaaaaataaagatgacgta
cgagagatttgtcaaaaaatgtttaacacccttaaactcaatacatccaactcctcaaaa
tcaaatgtgctgttgaaagctcctatacagctctcgcaaatgactgggcacgctgaccac
aagacagaagacgtcaaaggaatctggatgatgagaagggatttaggcacgacagtagat
gctaagaaacttgagaaagctgaagcacggctaaaagcaaagcaagaaaagaggacggag
aagaattctcagaagactgcaaatcctttgattcttgaggaagcctcagccagccaagct
tctaacaagaaggaaagccgtttggaagcatcaggaaaaaataagtcctatgatatcaag
attgagaattttgatgtctcctatggagacaggagcttgcttactggcgccgatttgcac
ctcgcttatggcagacgttatggcttggttggtcggaatggcttagggaaaacaacgcta
ctgaagatgatgtcagcacggagcctacgtatcccatcacacatcagcatcttgcatgtc
gagcaggaggtggtgggtgatgacacacaggcgcttaagagtgtgctggagtgtgacaca
gtccgtgaaagcctgctacagaaagagaaagaattgaccacaaagctgaatagtggcgtg
ggcgatggtacagagagcagcaagctaactgaaatttatgcaaaattggaggagattgag
gcagacaaggctccagccagggcgtctgttattctggctggtttggggttcagttccaag
atgcagcaacagatgaccagggagttctctggaggctggaggatgaggttggctttggcc
agggcactgtttgccaagccggatcttttgttactagatgaacctacgaacatgttggat
gtgcgagccatcctctggttggaaaactatctacagacctggcagtccactatcttggtg
gtgtcgcacgatcgcaacttcctaaatgctgtggcgaccgacattgttcacttgcactct
cagcgcctggaaacctatcggggtgactatgagaactttgtaaagaccaaagaggaaaga
ttgaaaaaccagcagcgcgagtatgaagctcagcagcagtacagagagcacatacaggtg
ttcatagacagattccgatacaatgccaacagagcttctcaagtacagagcaagttgaaa
ctgctggagaaactgccagagctgaaacctcttgaaaaggagctagaggtgactctaagg
tttccagacaacttcgagaagttgtcccctccaatattgcagctaactgaagtggacttc
agctatacccctgagcatcgcattttcataaatctttccgtgtcagctgaccaggactcc
cggatttgcattgttggagagaacggtgctggtaaaacaacgctgttaaagatactgctc
ggggacctgacgccgaatcagggtatcagacacgcccatagaaatttaaaaattggctat
ttcagtcagcaccatgtggaccagttggaaatgaatgtcagctcagtcgaactcttggca
tcaaagtttccagggaggccagaggaggaataccggcatcagcttggtgggtatgggata
tcgggggatctggctgtccggccagttgccagtttgtctggaggacagaagagtagagtg
gcatttgcacagatgacaatggcccaacccaacttttatatcctggatgaacctacaaac
catctagacatggagaccattgaggcattgggaaacgcactacagaaatttaagggtggc
gtgatcctggtatctcatgatgaacggctgattcgtatggtttgcaaggagctgtgggtg
tgcggctgtggtactgtgaagcgagtggatggtggctttgacgagtataaagacattctc
caggaacaatttcgcaaagaaggatttctatga
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