KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122556170
Entry
122556170         CDS       T08871                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpla04121]
    122556170 (hltf)
   03400 DNA repair and recombination proteins [BR:cpla03400]
    122556170 (hltf)
Enzymes [BR:cpla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122556170 (hltf)
Ubiquitin system [BR:cpla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122556170 (hltf)
DNA repair and recombination proteins [BR:cpla03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122556170 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-RING_5 zf-ANAPC11 zf-C3HC4_4 RING_XB3-XBAT31 Prok-RING_4 DUF5817
Other DBs
NCBI-GeneID: 122556170
NCBI-ProteinID: XP_043558622
LinkDB
Position
13:67455417..67531751
AA seq 1032 aa
MLFWRNWSSSQYLGGRSASQFSDGSFLFAPDPEESLSQMINRTLTDDTASPDEDLDSVLF
GNLRGNVVGMRYYTGVVSNNEMVALQREPNNPYDRNAVQVNNVNGIQVGHIKRELAAPLA
FILDNRLARVEGRVVPYGANNVFTMPVQLSFWGREENRDTVLERLKRHGFKLAPPTKGSL
LGGGIAEAWSGMGSARPGPSYKAPVHTAVQMTVEQLKNEFDKIFEDLKEHDKTREMEPAK
AVCTPLLPHQKQALAWMVLRENNADLPPFWEQRNGMYYNLLTNFAEKERPENVRGGILAD
DMGLGKTLSTIAVILTNFHQGKPLPTEKFTPGPVMEEEPSGFADALGKSSARKANEELSN
TFKMQTGADNRNKATVIDTTGSITSSGSKPHTSSYPKRKKTENVKYTYSSDSEKDEECIS
TKKKVKTQQKSATGKRTEWNATSSGRKGTAESKSQSSCGLMEDIDFAAALGGASSSTLKK
IKKGCPSSQPSTNTAANAKARSTLIVCPLSVLSNWIDQFERHLCPDVKLNMYLYYGSERN
KTASFLAEQDIVLTTYNTLTVDYGSGSASPLHKVKWLRVVLDEGHTIRNPNAQQTKAALT
LTAERRWVLTGTPIQNSLKDLWSILSFLKLKPFTDRQWWHRTIQRPVTMGDQHGLKRLQA
LIKNITLRRTKASKVNGKPVIELPERTVFVQHITLTDEENQIYESVKNEGRAIIGRYFSE
GSVFTHYADVLAILVWLRQLCCHPRLFANSSAVMGSSDNATPDELREKLLKKMKLVLSCG
SDEECAICLESLTFPVITHCAHVYCRPCICQVIQSEQPTARCPLCRAEIRVEQLVECPPE
EADVAAPDKSQQIWVSSSKVDALMHSLIELRKQDPTVKSLVVSQFTAFLTLIETPLRQEG
FAFTRLDGSMPQKRRINAIESFQSSEPGSPTVMLLSLKAGGVGLNLTAASRVFLMDPAWN
PAAEDQCFDRCHRLGQTRDVVITKFIVKNSVEENMIKIQNKKRELAAGAFGTKRQREIKQ
SRIEEIKILIDM
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgctgttctggcgcaactggtctagttcccagtatttgggtggacgatctgcatctcag
ttttcggatggcagctttctttttgctccagatcctgaagaatcattatctcagatgata
aaccgcacgttaacagatgacactgcgtcaccagatgaagatctggattctgttttattt
ggaaacctacgtgggaatgtggttgggatgcgttattatacaggagtggtgagcaacaat
gaaatggttgcccttcagcgagaaccaaacaacccatacgacagaaatgcagtccaagta
aataatgtgaatggtattcaggtgggacatatcaaacgggaactggcagctcctctggcc
tttatcctggataacagacttgccagagttgaaggcagggtggttccttacggtgccaac
aacgtgttcaccatgccagtgcaactttcgttctggggtagagaagaaaaccgtgacact
gttctggaaaggttaaagagacacgggtttaaactggcacctcccacaaaaggttctctt
ttaggtggtgggattgctgaggcatggtctggaatgggatcagcaagaccgggtcccagt
tacaaagctcctgtgcacactgctgtgcagatgacagtggaacagctcaagaatgaattt
gacaaaatatttgaagatctgaaagaacatgacaagactcgggaaatggaaccagctaag
gctgtttgcactcccttgctccctcaccagaagcaggccctggcttggatggtactgcga
gagaataatgcagacctacctccgttctgggagcagaggaacggcatgtattataacctg
ctgacaaatttcgcagagaaggagagacccgaaaatgttcgtggaggaatcctggctgac
gacatgggcttgggaaagaccctgtcgactattgctgtaatccttacaaattttcaccag
ggaaaaccactccccacggaaaagttcacaccggggccagtgatggaagaggaaccatct
ggctttgctgatgctttggggaaatcttctgcacgtaaagctaacgaggaactatccaat
actttcaaaatgcaaacaggtgctgacaacaggaacaaggccactgtaatcgataccaca
ggaagcattacttcgtcaggatccaaaccccacacatcttcatatcccaaaaggaaaaaa
acagaaaacgttaaatacacgtacagcagcgattcggaaaaggatgaagaatgtatctcc
acaaaaaagaaagtgaaaacgcaacagaaaagtgcaacgggtaaacgaacggaatggaac
gccacaagtagcgggagaaaaggcactgcagagagcaagtcgcagtctagttgtggccta
atggaggatattgattttgcagctgctcttggcggtgcttccagttccactttaaaaaag
atcaagaaaggttgtccaagctcacagcccagcactaatacagcggctaatgcaaaggcg
agatcgaccctgatagtttgtcctctctctgtgctcagtaactggattgatcagtttgag
cgacatttatgtcccgatgtgaaattgaatatgtatctttattacggctctgagagaaat
aagactgcatcattcctcgctgagcaggatattgtactgaccacctacaatacgttaaca
gtcgattatgggagtgggagtgccagccccctgcacaaagtgaagtggctccgtgtggta
ttggatgagggccacaccatacggaatccaaatgcccagcagaccaaagctgcactcaca
ctaactgctgagagacgatgggtactaacaggcacgccgattcaaaactccttgaaggat
ctttggtccatcctttcgtttctgaagttgaaaccatttacagaccgacagtggtggcac
cggactatccaacggcctgtaaccatgggggatcagcatggtctcaaacggctgcaagca
ttaataaaaaacattaccttgcgaagaaccaaagccagtaaggtaaatggcaaacctgta
atcgagctcccagagcgtacggtttttgtgcagcatataaccctaaccgatgaagagaac
caaatctacgagtcagtaaagaacgaaggccgggccatcatcggcagatatttcagtgaa
ggatccgttttcacacattatgcagatgtcctcgctatcctcgtctggctgaggcagctg
tgttgtcatccgcgtctgtttgcaaattcttcagctgtaatgggttcctcagacaatgcc
actcctgacgaactgcgggagaaactgctgaagaaaatgaaactggttttgagttgtggc
tctgatgaagagtgtgccatttgcctggaatcactaacctttcctgtgattacccactgt
gcccatgtttactgcagaccgtgtatctgtcaggtcattcagagcgagcagcccactgcc
agatgccccttgtgcagggcagagatccgagtggaacagctggtggaatgtccccctgaa
gaggcagacgttgcggcacctgataaatcccagcagatctgggtctccagttcaaaggtc
gatgccctgatgcattccttgatcgagcttcgaaagcaggatcccaccgtcaagagttta
gtagtgtctcagttcacagcttttctaactcttatagaaacaccactccgacaagaaggc
tttgcatttacgcgcctggatggctcaatgccccagaaacggcggataaatgccattgag
tccttccagagcagtgagccaggctctccgactgtcatgctgctgtcgctgaaagctggt
ggagttggtttgaatttgacggcagcgtctcgtgtattcctcatggaccctgcctggaat
cctgctgctgaggatcaatgctttgacagatgccacagactgggccagaccagggatgtt
gtaatcaccaagttcatcgtgaaaaactccgtggaggaaaatatgatcaagattcagaac
aagaaacgagaacttgcagcaggggcttttggaacgaagagacagcgcgagataaaacaa
agccgaattgaagagattaagattctgattgacatgtaa

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