Chiloscyllium plagiosum (whitespotted bambooshark): 122556225
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Entry
122556225 CDS
T08871
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122556225 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122556225 (trip12)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122556225 (trip12)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
HECT type E3
122556225 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
Motif
Other DBs
NCBI-GeneID:
122556225
NCBI-ProteinID:
XP_043558737
LinkDB
All DBs
Position
13:complement(79235849..79454779)
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AA seq
2071 aa
AA seq
DB search
MSNRPNYNTGGSLRRSQRNTAGAQPQDEATGGRSQPEETKQKPIQSRPTSKAPKLQSDTT
SGQSRGCVSRRNSRSCSSSSVASVTQQDDSIRPERPKTGQTKRDSSRSSLRGVKRGPSPD
YSSSNSTCSAKRPKALQPSENPTETQKHKLQTKSPKKRKSVQDQIRTAPAASTSKAQSRK
QTGPISASPFQKRKKVESTTSVNSDSVADSISAEERSAKPTKLASKSATSAKAGCSTVTD
SSSSSASTSSSSSATVSGAVPQGARLKQGKDQNKARRSRSASSPSPRRSSREKEQNKTGG
SSKFEWAARFSPKVSLPKAKLSLPGSSKSETSKPGPSGLQAKLASLRRSTKKRSESPPAE
LPSLRRSTRQKTTGSCASTSRRGSGLGKRGASEARRQEKMADPDNNQDGANSSSRTEDVP
QGASASSSVAGAVGMPTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTI
GSGASSKAQQLLQGLQATGDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQ
MEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLS
RRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQR
LTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPILSSGMFIM
VVRMFSLMCSNCPTLAVQLMKQNIAETLRFLLCGASSGGCQEQIDLVPRSPQELYELTSL
ICELMPCLPKEGIFAVDTMLKKGSAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVG
EDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTGGHSEMRKDDARAQL
MREDPDLAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAV
SSHIASMLSSQDFKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETLLTSP
PKACSSGIGTLGTAATISTTNVASNTVADLGSSSFPSMDDSLDLSPQGRLSDVLKRKRLP
KRVTRRTKYSPPRDDEKVDNQAKSPTATQSPKSSFLASLNPKTWGRLSTQTNSNNAEPAR
TAGVSGIARVTPKDTMANNREKIKVWIKEQAHKFVDRYFTSENVDASNPALNVLQRLCCA
TEQLSLQVDGGIECLLDIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSDKDLVNRHVRL
RRFLHVFYGCPPPGEEPLGRLEPLGNGPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SRGSQALKFFNTHQLKCQLQRHPDSTNVKQWKGGPVKIDPLALVQAIERYLVVRGGGCFI
SVLSRYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQ
AVRQFSVQADDERESTDDESNPLGRAGIWTKTHTIWYKPVREEEEGTKDTVGGKRGRAQT
APTKTSPRNARKHDELWHDGVCPPVGNPLEAYLLSGPPDGITFEDPSLDVILLLRVLHAI
SRYWYYLYNNAVCKEIIPTNELINSKLTAKANRQLQDPLVIMTGNIPIWLTELGRTCPFF
FPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQ
AESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGDEVTLSHPK
GSQEGTRYIHNPRGLFPVPFGRNTKPAHVAKVKMKLRFLGKFLAKAIMDFRLLDLPLSLS
FYKWMLRQEISLCSHDLFNIDPVVAKSICHLEDIIKQKKKLEQDRSQSKECLQQALESLN
MNGCSVEDLGLDFTLPGYASVELKKGGKDTVVTIHNLEEYLRLVVYWTLNEGVSKQFESF
RDGFESVFPLHHLQYFYPEELDQLLCGSKSEAWDVKTLMECCRPDHGYNHDSRAVKFLFE
ILSSFDGEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVN
YLKLPDYSSIDIMREKLLIAAREGQQSFHLS
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattacaatacaggggggtcgctgcgacgttcacagaggaacact
gccggggcccagccacaagacgaagcaacaggaggaaggtcacagccagaagagacgaaa
cagaaaccaattcagagtaggccaacttctaaagcaccaaaattgcagtcagacactacc
tctggacagtccagagggtgtgtgtcaagaaggaactctaggagttgtagctcttcatct
gttgcttctgtgacacagcaagacgatagcattaggccagaacgacccaaaactgggcaa
actaaaagggacagctccagaagcagtttgagaggtgtgaaacgtggtccgagccctgat
tacagcagttcaaactccacctgctctgcaaaaaggcccaaagcacttcaaccctcagaa
aatcctactgaaacacaaaaacacaagttgcaaacaaagtccccaaagaaaaggaagtct
gtgcaagatcagataagaactgccccggcagcctccacaagcaaggcccagagtagaaaa
cagactgggccgatcagtgcctccccctttcaaaaaaggaaaaaggttgaaagtacaact
tctgtaaacagtgattctgtggctgactcgatcagtgctgaagagaggtctgcaaaacca
accaagctggcttcaaaatcggcgacctcagccaaagctgggtgtagcactgtcactgat
tcttcttcttcttctgcatcaacatcatcctcctcttctgctactgtttctggtgctgtg
cctcagggagccaggctaaaacaaggaaaagatcagaataaggctcgtcgctcccgctcg
gcctcgagtcccagccctcgcagaagcagccgagaaaaggagcagaataaaactggtggt
tcctctaaatttgagtgggctgctcgttttagccctaaagttagtctgccaaaagcaaaa
ctgtcacttccagggtcttccaaatcggagacttcaaagccagggccttcaggcctacaa
gccaagttagctagcttaagaaggtccactaagaagcgcagtgaatccccaccagcagag
ctccccagtttgaggcggagcacacggcaaaagaccacgggctcgtgtgctagtaccagt
cggcgaggctctggcctgggcaaaagaggagcatctgaggctcgccgacaggagaagatg
gcagatcctgacaacaaccaggatggagcaaattcgtcttcacgcacagaagatgtacct
caaggagcatcagcttctagttctgttgctggagctgttggaatgccaacttctggagag
agcgagtcagatgattctgaaatgggccgcctacaagctctactagaggcacgtggcctt
ccaccccatctttttggcccccttggaccacgaatgtcccagctatttcatcgaacaatt
ggaagtggagcgagttcaaaggcacaacagctcctacaaggtctacaagctactggagat
gaaagtcaacaactacaagcagttatcgagatgtgccagttgttggtgatggggaatgaa
gaaaccctgggaggatttccagtgaagagtgttgttccagctttgataactttgttacag
atggagcacaactttgacattatgaaccatgcttgcagagctttgacttacatgatggaa
gctctacctaggtcgtcggctgtggtggttgatgccattccagtcttcctggaaaagcta
caagtcattcagtgcatcgacgtggctgagcaagctttgactgctctggaaatgttatca
cggaggcatagcaaagccattttacaagctggaggattggctgactgcttgctctacctg
gagttcttcagcatcaatgcccagcgaaatgccctggcaatagcagcaaattgctgccaa
agtattactcctgatgaatttcactttgttgctgattctttgcccttgttaactcagagg
ctgacccatcaggacaagaaatctgtcgaaagtacttgtctgtgttttgctcggctggtg
gataacttccaacatgaagaaaacttgttgcagcaggtggcatcacgtgatttgttgact
aacatacagcaacttctggtggtgactcccccaattctcagctcgggtatgtttatcatg
gtggtccggatgttctcgttgatgtgttcgaactgtcccactctggctgtgcagcttatg
aagcaaaacattgcagaaactcttcggtttttactttgcggagcttcaagtgggggctgc
caagaacaaatcgatcttgtaccaagaagtccacaagaactttatgagcttacttccctg
atttgtgaattaatgccatgtctacccaaagaaggaatttttgctgttgataccatgtta
aagaagggaagtgctcaaaatacagatggtgcaatatggcagtggcgtgatgatcgaggt
ctctggcatccatacaaccgaatcgatagtcgcataattgaggcagcccatcaagtgggt
gaggatgaaataagcttgtcaacattgggtcgagtttatactattgactttaactctatg
cagcagatcaatgaggacactggaacagcccgtgctattcagagaaaacccaatccgttg
gccaacacgaacactggtggtcactctgaaatgaggaaggatgatgcacgtgctcaactc
atgagggaggacccagacctggctaaatgctttataaagacattgtttggtgtgttatat
gaagtgtatagttcatcagctggacctgctgtcagacacaagtgccttagagcaattctt
agaataatttattttgctgatgctgaacttctgaaggatgttcttaaaaatcatgctgtt
tccagccacattgcttccatgttatcaagtcaagatttcaagatcgttgtcggagcacta
cagatggcagaaattttaatgcaaaagttaccagatatatttagtgtttactttcgaaga
gaaggtgtgatgcatcaggtgaaaaatttagcggagtctgagactctacttaccagccct
ccgaaggcatgtagtagtgggataggaacgctgggcactgctgccacaattagcacaacc
aacgttgcaagcaatacagttgcagatctcggatcctccagtttcccaagtatggatgat
tctctggacctaagtccacaaggacgattgagtgatgtcttaaaaaggaaaagattgcca
aaacgtgtaaccaggaggacgaagtattcacctccaagagatgatgaaaaagtagacaat
caagcaaagagtccaacagccacccagtctcctaaatcttcctttcttgcaagcttaaat
cctaaaacatggggaaggctaagcacacagaccaatagcaacaacgcagaaccagcacgc
accgctggtgttagtggcattgcacgggtcaccccaaaagacaccatggccaacaacaga
gagaagataaaagtctggataaaggagcaagcccataagtttgttgatcgttacttcacc
tcagaaaatgtagatgcaagcaatccagcactgaatgtacttcagagactatgctgtgcc
actgaacaactcagtttgcaggtggatggtgggattgagtgccttttggatatccgctca
atagtctctgagtctgatgtgtcctccttcgaaatccagcacagtggttttgtcaaacag
ttgctattgtatttgacttcaaaaagtgataaagatcttgtgaatcgacatgtcaggttg
agaagatttcttcacgttttctatggttgtccacctccaggagaggaacctcttggtcga
ctagagcctctgggcaatgggcctttgctggcacttgtgcacaaaatgaataactgtctg
agccagatggagcaatttccagtgaaggtgcacgattttccaagtgggaatgggacagga
agcaggggctcacaggccttgaaattcttcaatacacatcagttaaaatgccagctgcag
agacacccagacagcaccaatgtcaagcaatggaagggtggtcctgtgaagattgatcca
ttggctttagtacaggctattgagcgctatcttgtcgtcagaggtggtggctgctttatt
tctgtgttaagcaggtatggaagaatacgtgaggaagatgaggacagtgatgatgatggc
tcagatgatgaaattgatgagtcattggctgcccagttcttgaattcaggaagtgtaagg
catagactacagttttacataggagatcacttgctgccttacaacatgactgtttaccaa
gctgtcaggcagttcagtgtgcaagctgatgatgaaagggagtccacggatgatgaaagt
aacccattagggagagcaggaatatggactaagacgcatacaatatggtataagcctgtt
cgagaagaggaggaaggaactaaagatacagttggtggaaagcgaggacgagctcagact
gcacccacaaaaacctccccgagaaacgcaaggaaacatgatgagctgtggcatgatggt
gtgtgccctccagttggaaatcctttggaggcataccttctttcaggtcctccagatggt
atcacatttgaggacccatctcttgatgtgattctgcttctgagagtgcttcatgctatc
agtagatactggtattacctatataataatgcagtgtgtaaagagattatcccaacaaat
gaattgatcaacagcaaactaactgcaaaggctaaccgtcaacttcaggatcccctggtt
attatgacaggaaatataccaatttggttgactgaattgggaaggacctgcccgtttttt
ttcccgttcgacacacggcaaatgttgttctatgtgactgcgtttgatcgagatcgagcc
atgcagagattactagatactaacccagaaatcaatcagtctgattcgcaagatagtaga
gttgctccccgcttggatcggaaaaagcgtactgtaaacagggaagagttgttgaaacaa
gcagaatcagtaatgcaggatttaggaagttcaagggcaatgttggagattcagtatgaa
aatgaagttgggactggcctaggtccaacattggaattctatgcacttgtatctcaggaa
ctgcagagagctgatctgggtctgtggcggggagatgaagtcacactgtcccatcctaaa
ggtagccaagaagggaccagatacatccataatccccggggccttttccctgtccctttc
ggaaggaatacaaagccggcacatgtggctaaagtgaaaatgaaattgcgatttttgggc
aagtttttggccaaagcgatcatggactttcgattgttggatttgcctcttagtctatca
ttttacaaatggatgctgcggcaagaaatttccctctgctcccatgacctcttcaacatt
gatccagttgtagcaaaatcaatttgtcatcttgaggatatcataaaacaaaagaagaaa
ttagagcaggacagatcacagagcaaagaatgtcttcaacaggctctggaaagcctcaat
atgaatggctgctctgtagaagatcttggactggacttcacattacctggatatgccagt
gttgaactgaaaaaaggaggcaaggatacagttgtcaccatacacaatttggaagagtat
ctcaggctggtagtatactggaccttgaatgaaggagtttcgaaacagtttgaatctttt
cgagatggcttcgagtcagtttttccactccatcacttgcagtatttttaccctgaggag
ttggatcagctactctgcggctccaagtcagaggcatgggacgtgaaaacattaatggaa
tgttgcaggccagatcacggatataatcatgacagtcgtgcagtgaaatttctgtttgaa
atactcagtagttttgatggtgagcaacaaagactatttcttcagtttgttaccggaagt
ccacgactacctgtcggagggtttcggagtttaaaccccccactcaccattgtgcgcaag
acatttgagtccacagaaaaccctgatgatttcttaccttctgtaatgacctgtgttaat
tatctcaagttgccagattactccagtatcgacataatgcgtgaaaaacttttaatagct
gctagagaagggcagcagtcattccatctctcctga
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integrated database retrieval system
