Chiloscyllium plagiosum (whitespotted bambooshark): 122556237
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Entry
122556237 CDS
T08871
Name
(RefSeq) eukaryotic initiation factor 4A-II isoform X1
KO
K03257
translation initiation factor 4A
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122556237
03012 Translation factors [BR:
cpla03012
]
122556237
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122556237
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122556237
mRNA cycle factors
Stress granule specific factors
122556237
Translation factors [BR:
cpla03012
]
Eukaryotic type
Initiation factors
eIF-4
122556237
Exosome [BR:
cpla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122556237
Exosomal proteins of bladder cancer cells
122556237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
122556237
NCBI-ProteinID:
XP_043558776
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All DBs
Position
13:complement(80333476..80340863)
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AA seq
407 aa
AA seq
DB search
MSCGSADYSSKEHGPDGMDPDGVIESNWNEIVDNFDDMNLKETLLRGIYAYGFEKPSAIQ
QRAIMPCIKGFDVIAQAQSGTGKTATFAISILQQLELDMKESQALVLAPTRELAQQIQKV
ILALGDYMGATCHACIGGTNVRSEMQKLNAEAPNIVVGTPGRVFDMLNRGYISSRWIKMF
VLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE
ELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTV
SALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR
IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtggctccgcggattacagctctaaagaacatggcccagatggcatggaccca
gatggcgttattgaaagcaactggaatgaaattgttgataactttgacgacatgaacctg
aaggagacccttcttagaggaatttatgcatatggatttgaaaaaccttctgctatccaa
cagagggcaattatgccatgtattaaagggtttgatgttattgcccaagcacagtctgga
actggtaaaacagccacatttgcaatctcgatcctgcagcagctggagttagatatgaaa
gaatcgcaggctttggtcctggcccctaccagagaactggctcagcagatccagaaggta
atcctggccctgggtgattacatgggtgctacatgccatgcctgcatcggtggcactaat
gtacgaagtgagatgcagaagctgaatgcagaagctcccaacattgttgtaggaactcca
gggcgagtgttcgacatgttgaacaggggatatatatcttcaaggtggatcaagatgttc
gttttagatgaagctgatgaaatgttgagtcgtggattcaaagatcaaatctacgagatt
tttcagaaactgagcacaaacattcaggtggttttgttgtcggctactatgcccagcgat
gtcttggaggtcactaaaaagtttatgcgtgatccaatccgtatccttgtgaaaaaagag
gaactcacccttgagggtatcaagcagttttacatcaatgtggagagagaggaatggaag
ttggacacactttgtgacttgtatgaaactctaaccataacacaagctgtgatttttctt
aatacgaggaggaaggttgattggttaactgaaaaaatgcatgcaagggacttcactgtt
tctgcattgcatggtgatatggatcagaaagaacgcgatgtgattatgagggaattccgt
tcgggatctagccgcgtacttatcactactgacttattggctcgtggcatcgatgtacag
caggtgtctctagttattaactatgacttgcccacaaatcgtgagaattacattcacaga
attggtcgtggtggtcgcttcggaaggaaaggtgttgctattaactttgttactgaagaa
gataaacgaattcttcgtgatattgagacattctacaatacaactgtggaagagatgcct
atgaatgtggctgacctgatctaa
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integrated database retrieval system
