Chiloscyllium plagiosum (whitespotted bambooshark): 122556312
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Entry
122556312 CDS
T08871
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122556312 (gigyf2)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122556312 (gigyf2)
Surveillance factors
Other surveillance factors
122556312 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
122556312
NCBI-ProteinID:
XP_043558873
LinkDB
All DBs
Position
13:complement(19890178..20063323)
Genome browser
AA seq
1322 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSITSPPLSPALPKYKLADYRYGREEMLALYVKDLKIPV
DLTDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSTAVLRLMGRGGGTVVGAPRGRS
SSRGRVLTSSTPRTDLKFSPLKLFMKGLFWGERRFEKPGRKEPGSSHPKDQHANLGAPND
FLSSSGFLSKSGRPSFEEMGSSTRKHEFTRSESENWRVSRDEQNGDDDDGGWRLAGPRRE
GDRWQPHSPGWREPTERRRRFDFEYRDKDDERGHRRVRSGSGSVDDEKDSLPEWCLEDAE
EEMGTFDSSGAFLSLKKAPKEPIPEEQELDFKQLEDGEERSNSEDSEKEEAKEPDKRTKE
KTDEETNKTEENKDVSRTNSSPSPLEPQMSIVASPPKREEKVQEKTDKIEDAQQKSVKEV
MDTSAPYQKPLIPSVNSTNTTTAATTTTTASPSPKITAVANRNIPQDNDDDEGLKHLEQE
AEKMVASLQDNALDDERLSTQIQDKRTKAASMPLTHDAAMKWFYKDPQGEIQGPFTNQEM
AEWFQAGYFTMSLFVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLGDLDQERLKRQQ
ELATLNLYQMQQIQCQQLLQAQLMTRQQYAQAIAHHQKAAVEAITTQQQQQQQQQLAVIL
EQFQALKLRSSEQGLMPPATRSMSVPDSASIWELQAATSQPSGWDGGSVWDLPVDAPVQG
TAVEQIQQIERGKAVKLEQEKRDAEIRAKREEEERKRQEIRRHQEELLRRQEEERKRKEE
EELARRKQEEALQRQRDHEAAVRQQKEEEERQQEEARRHEERQREEEERRQKEEILRKQE
EERRRKDEEAARWVIEEEETRRRMEEDNRLRMEEENRLRLEEEEQKRKDIERHKELQKQE
SIRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSSSVSSQTQSTLSLAEIQKLEE
ERERQLREEQRRQQQDLMKILQQQNQQQKLSGWGNIPKPSVTTKSLLEIQQEEFKQMQKQ
QENKTQTRASAAVKLNLSACHEESSFKNAVTMKREEASTKRIGSERNHHSSLPVSTTSVW
GSVNASSANQWGTDISSVWGAPDHKNTNVGFWDEAVKEVGPPARNQLSKSNKNNSNPGKS
HGVQNKANKKAEEEEKLMKLFQGVNKSQDGFTLWCEQMLHVLNTANNLDVPTFVSFLKEV
DSPYEVHDYVRAYLGDTPETKDFAKQFLDRRAKQKANQQRQQQQQPVRQQQDSAWTVSHT
GLQPIYPSNHSRNQQSNFESVQSGKKKKKQKMIRADPSILGFSVNASSERLNMGEIETLD
DY
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaacgcaaacccttaactttgggcctgaatggcttcgtgcattgtcaagt
ggtgggagtattacctccccacccctctcaccagcattgccaaagtataaattagcagat
taccgttatggacgagaagaaatgctagcactttatgtaaaggatctcaagattcctgta
gatctaactgataaggagtttcttcctattttacaagaggagcccctaccacctttagca
cttgtgccatttacagaagaagaacagagaaatttttctatgtctgtaaatagtacagca
gtactgagattaatgggacgaggtggaggaactgtggttggggcaccaagaggtagaagt
tcctcaagaggtagagtattgacatcaagtactcccagaacggatttgaaattttcccca
ttaaagttattcatgaagggtttattttggggagaacggcggtttgaaaaaccagggcga
aaagaaccaggttcgagtcatcctaaggaccaacatgccaacttgggtgctccaaatgat
ttcctctcatcctctgggtttctttcaaaatcagggagaccatcttttgaagaaatggga
tcatcaacaaggaagcatgaattcacccgttcagagagtgagaattggcgagtcagtagg
gatgagcagaatggtgacgacgacgatggaggttggcgtttagcaggacctcgtcgggaa
ggggacagatggcagcctcatagtccaggttggagagagcccacagaacgcagaagacgg
tttgattttgagtaccgagataaagatgatgaacgcggtcatcgacgagtgcgctctggt
agtggtagtgtggatgatgaaaaagatagcctgccagaatggtgtctggaggatgcagag
gaggagatgggaacgtttgattcttctggagcgtttttgtctttaaagaaagctccgaaa
gaacctattccagaggaacaggaattggactttaaacagttggaggatggagaagagaga
tcaaattcagaggacagtgaaaaggaagaagctaaggagcctgataagagaaccaaggaa
aagactgatgaagaaacaaataaaactgaagagaacaaagatgtatcccgtacaaattca
tcgccatctcctttggagcctcagatgtcaatagttgctagcccacccaaaagggaagaa
aaggtgcaagagaaaactgacaaaattgaggatgcacaacaaaagtctgtcaaggaagtg
atggatacctcagccccttatcaaaaacctttaattccatctgttaatagcactaatact
actactgctgctacaactacaactacggcatcgccttcacccaagatcacagccgttgca
aaccggaacatacctcaggataatgatgatgatgaagggctaaaacatcttgagcaggaa
gccgaaaagatggtagcatcattgcaggataatgccttagatgatgaaagactatcaaca
caaattcaggataaacgaactaaagctgcctccatgccattgacacatgatgctgctatg
aaatggttttataaagatccacaaggagaaatacaaggaccgttcactaaccaagaaatg
gcagaatggttccaggctggctacttcacaatgtctttattcgtaaagagaggctgtgat
gagggtttccagccattgggagaggttattaagatgtggggcagagtaccttttgctcca
ggaccgtctcctcctccattgctgggtgacctggaccaggaaagactgaagagacaacag
gagcttgctactttgaatttgtatcagatgcagcagatacagtgccagcagcttctgcag
gcgcagcttatgacccggcaacaatatgcacaagcaatagcacatcatcaaaaggcagct
gtggaagccataacaacgcagcagcaacagcagcaacaacaacaactagccgtcatactt
gagcagtttcaagccttaaagttaagatcctcagagcaaggtctgatgcctccagcaaca
cgttccatgagtgtgcctgatagtgcctcaatatgggaattgcaggctgcaacatctcaa
ccctcaggttgggatggtggtagcgtgtgggacttgccagtcgatgccccggttcaggga
accgcagtcgagcaaatccagcagattgagagaggaaaagctgtcaagcttgagcaagaa
aagagggatgcagaaattagagctaaaagggaggaggaggaaagaaaacgacaagaaatc
cgtcgccatcaggaagagcttttgcgaaggcaagaggaagagagaaaacgaaaagaggaa
gaggaacttgcaaggaggaaacaggaagaagcactccagcgccaaagagaccatgaagca
gcagttcgtcagcaaaaggaagaggaggagcgacaacaggaagaagcccgccggcatgaa
gaaaggcagagggaagaggaagaaagacgtcaaaaggaagaaatccttcgaaaacaggaa
gaagagcggcgacgtaaagatgaagaggcagcacggtgggtgatagaggaggaagaaact
cggcgacgaatggaagaagataaccgcctccgaatggaggaggagaatagactccgacta
gaagaggaggaacaaaaacgcaaagatatagagcgtcataaagagctgcagaaacaggag
tccatacgacaaagacaacagcaacaagaggcactgagacgtttacagcaacagcagcaa
caacaacagctagcacaaatgaagcttccttcctcttcaacatggggccagcagtcatca
tcagtttcatcgcaaacccagagtacgctatcactagctgaaatacagaaactggaggag
gaaagagagcggcagctacgcgaagagcaacggcggcagcaacaggatttgatgaaaatt
ttgcaacaacaaaatcaacagcagaaactgtcaggatggggaaatattcccaaaccttca
gtcactaccaaatcacttctggagatacagcaagaggagttcaagcaaatgcaaaaacaa
caggagaacaagacacagacaagagcatcagcagcagtaaagcttaatctctctgcttgt
catgaggaatcatcgtttaagaatgctgtaacaatgaaaagagaggaagcatcaactaag
cgaataggatcagagcggaaccaccattccagtttaccagttagcactacttctgtatgg
ggttcagtaaatgccagttctgccaaccagtggggaacagacattagcagtgtatggggt
gctccagaccacaagaacacaaatgtgggcttctgggatgaggctgtgaaagaagttggt
cctccagcaagaaaccagctctccaaaagtaacaagaacaattctaaccctggaaagtca
catggagttcagaataaagcaaataaaaaggccgaagaggaggaaaagctaatgaagttg
tttcagggtgtgaacaagtcacaagatggatttacattatggtgtgaacagatgttgcac
gttctcaacacagccaataatttggatgtccctacatttgtctcatttttgaaagaagtt
gactctccttatgaagtccatgattatgtccgagcttaccttggtgacacgccagaaaca
aaagactttgcaaagcaattcctagaccgacgtgccaaacagaaagccaaccaacaacgc
caacagcaacagcagccagtacggcagcaacaggattcagcatggacggtgagtcataca
ggcctacagcctatctatccatcaaatcacagcagaaatcaacagtctaattttgaatct
gtgcagtctgggaaaaagaagaaaaaacagaagatgatacgtgctgatcccagcatttta
ggtttttctgtaaatgcttcatctgagcgtctgaacatgggagaaattgagacacttgat
gactactga
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