Chiloscyllium plagiosum (whitespotted bambooshark): 122556425
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Entry
122556425 CDS
T08871
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122556425
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Protocadherins
122556425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
122556425
NCBI-ProteinID:
XP_043558997
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Position
14:complement(4957688..5005001)
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AA seq
800 aa
AA seq
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MTMATILMSRVSIVFLLCISVLVSEQLRYSIPEEVERGTYVGNVADDLGLKVWELPTRKF
LLISDYSKQYMEINVENGFLFVNERIDREQLCSKTAACYLSFQITLDNPLEMFPVEVEIL
DVNDNSPVFSRKEFYLQINELNAPGARFPLESARDLDVGTNTINTYQINPNEHFIIKVQT
RRGGNKNVELVLKRSLDREKQSTFTLVLTAIDGGIPQRSGTARIIINVIDTNDNAPVFDH
ETYRATVMENIANGSLVLRVHAADIDEGTNADVTYSFTNHVSQTIRELFKLDPMTGEIRV
RGVLDFEEANVYEFDVQAMNSAPSELSGLANVVIDVLDTNDNRPVLQVTVVSSAVREDAS
SGVGIALISVTDRDSGEYGTVQCQIPDSIPFKIERSLKGNYKLITNGFLDHEITPLYNIS
ISAWDGGFPPLSASKFVVVSVIDVNDNSPSFTQSSYKAYLMENNAPGTSIFAVSANDADL
NQNAEISYSIVDNRQQEEIPSSAYFTINSKNGNIYALRSFDYEQQKHFQVKVQAQDAGSP
PLSSTAFVNVIILDQNDNAPIIVSPLTWNNSATVEVMPRSTYPGYLVTKVIATDEDSGQN
ARLSYEFLEATDPSLFTDGLLSGEIRATRAFSDQDIFAVRVVLCVKDNGQPSLSSSATIS
FLVMSNVTEKSFEQRDEPRHSKFFSGINSYLIIIFGTTSFLFLIIILFLLTLKCRQDRNT
AEVYSSAVCCCNGRNSTDGFNRTPTGRDPLNYSGEVQTGSYHYSVCLSPESSKSDFLFLK
PCHPTLPFNDRSVRDSNAIN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggccactattctgatgagccgagtgtccatcgtttttttgctctgcatttct
gtcctggtttccgaacaacttcgctactcgattcccgaagaagtggaacgtggaacatat
gttggcaacgtcgctgacgatctaggattaaaggtttgggagttaccgactcgcaaattt
cttctgatttctgattactcgaaacaatacatggagataaatgtagaaaatggtttctta
tttgttaatgaaagaatcgacagagagcagctttgtagcaaaaccgctgcatgttatctc
tcgttccaaatcacgctcgataatcctttggaaatgtttcccgttgaagtggagatacta
gacgtaaatgataattcacccgtcttttcgaggaaggaattctatttgcaaatcaatgag
ttaaatgcgccgggcgctcgcttccctctcgagagcgcgcgtgatctggacgtgggtaca
aacacaatcaacacataccagatcaatccgaacgagcacttcattattaaagtgcagaca
agaagagggggaaataaaaatgtcgagctggtattaaagaggtctttggaccgtgaaaaa
cagtcaacgtttactctagtgttgacagccattgacggtgggattccacagagatcaggc
acagcgcggatcatcattaacgtcattgacacaaatgataacgcacccgtcttcgatcat
gaaacttacagagcgacggtgatggaaaatattgcgaatggctctttggtgctaagagtt
catgctgctgatatagatgaaggtacaaacgctgacgtgacttattctttcaccaatcat
gtttcccaaactattcgtgagttgttcaaattggaccctatgactggagagatcagagtt
cgaggagtactggattttgaagaagccaatgtttatgaatttgacgtccaagcaatgaac
tctgctccgtctgaattgtcaggtcttgcaaatgttgtcattgatgtacttgacactaac
gacaatcgtcctgtgttgcaagttacggtggtgtccagtgctgtgcgggaagatgcttct
tcaggggttggtattgctctgatcagcgtaacagatcgcgattctggcgaatatgggaca
gttcaatgtcagatcccagacagcattccgttcaagattgaaagatctttgaagggcaac
tacaagttgattaccaatggctttctggatcatgagattaccccactgtacaacatctcc
atttcagcctgggacggtggatttcctcctctttcagcaagtaaattcgttgtggtttca
gtaattgatgtcaatgataattcaccaagttttacacaatcgtcatataaagcgtacctg
atggagaataacgcacccggtacttctatatttgctgttagtgcaaatgatgctgatttg
aatcagaatgcggaaatctcttattccattgtcgacaatcgacagcaagaagaaataccc
tcctctgcgtactttacgattaactccaaaaatgggaacatttacgctctgcgttccttc
gactatgagcaacagaaacatttccaggtgaaagttcaagctcaagatgctgggtcgcct
ccattgagcagcactgcctttgtgaatgttattattttggatcaaaatgacaatgcaccc
attattgtttcacctctaacatggaacaactcagcaacagtggaggttatgccacgttca
acatatccaggatatctggtcaccaaagtaattgccactgatgaagactctggtcagaat
gcaaggctttcctatgagtttttggaagccactgatcctagtctgtttactgatggactt
ctttctggagaaattagagcaacgcgagcatttagtgatcaagatatctttgccgtgcgc
gtagtcctctgcgtgaaggacaatggacagccgagcctttccagcagcgccacaatatcc
tttctcgtaatgtccaatgttactgagaaatcatttgaacaacgtgatgaacccagacac
tcgaaatttttttcaggtataaatagttatctaatcataattttcggaaccacttccttt
ttgtttctcataataatattatttttgctcaccctgaagtgcagacaagatagaaatact
gctgaagtatatagctctgcagtctgttgttgtaatgggagaaattcgactgatggcttt
aatcggacaccaaccggaagggatcctttgaattatagcggggaagttcagaccggaagt
tatcattacagtgtgtgcttgtcaccggaatcatcgaagagtgactttctgtttttaaaa
ccttgtcatcctacgttgcctttcaacgatcggagtgttcgtgacagcaacgcaataaac
taa
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