Chiloscyllium plagiosum (whitespotted bambooshark): 122556428
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Entry
122556428 CDS
T08871
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122556428
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Protocadherins
122556428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Big_9
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122556428
NCBI-ProteinID:
XP_043558998
LinkDB
All DBs
Position
14:complement(5713285..5748892)
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AA seq
942 aa
AA seq
DB search
MAGAGGKQVVLCVLLSCLEGASGQIRYSIPEELKHGAFVGNIADDLGLNVGELSARRFRI
VSGASKRYLEVNLENGVLFVNEKVDREQLCGLRASCFLNLEIVIENPLELYQAEIEILDV
NDNAPSFPNAQLRLEITESAAPGARFPLESAHDPDVGTNSLRGYRLSPNEHFVLEVQSRS
ERRQSAELVLDRPLDRETESVHRLVLTAVDGGSPKKSGSVLITVRVLDANDNPPVFPQPV
YTVRLAENAPAGTLLLRLNATDPDEGSNGRIVYSFGQHAAQTVRELFSLDPQTGQLRVRA
PLDYEDCPVHEIFVQAKDLGANSVAAHCHVLLELLDVNDNPPEIALTSVSSPVSEDASPG
TVIALISVTDRDSGANGRVSCRLSDTGAGTGKLPFKLLPSFRRYYTLVTEHRLDRETVPE
YNVTVEARDGGTPPLSSNRTITVRVSDVNDNPPRFSRSSYTVRIPENNAPGASICSVSAE
DPDLNQNSYVSYSIVNEPLRGMPISTYVSVNSDTGRLYALRSFDYEQLRGFRVQIQAQDA
GFTPLSSNTTVHVLIVDRNDNGPVIVSPLARDGSVAAETVPRSAGPGWLAVKVTAVDADE
GPNGHLSYRLLQATDRELFHLERQTGEIRLARRFGAEDASQQTLIVQAKDNGLPPLSATV
TILLTAVDAPLPDPRSDSTGEPELSTDLTLYLIVSLGSVSFLFLVAILILALLRCHRDAV
SGRGLSPAAACCFPRRSRSAKPEARRQLPVTGAEVTAGHLPSQVYRYTERRSPGSASSDF
MFLRAGGGQAGGGPNGLLFGVGANAPSEVKQQNTEYHNPPLQRHTGSSSWDLEETGGRYD
GEMESGKVRSAGTAPTETNGLAQLPEADVHGWIPRYGPQYPYPDQPPGYKLNVYIPGSAP
LKLSKLQSFTASDMDKNNTFSTFGKKTKLISSLDIKPDRTLT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcgggaggaaagcaggttgtcttgtgtgttctcctgagttgtttggaggga
gcgagcgggcagattcgttactctattcccgaggagttgaaacacggggcttttgttggg
aatatcgcggacgacctgggattgaatgtgggcgagctgtccgcgcggaggttccggatc
gtgtccggggcctcgaaacggtacctggaagtgaatttggagaacggggtgctgttcgtt
aacgagaaagtggacagggagcaactgtgcggactgagggcttcgtgtttcctgaacctg
gagattgtgattgagaatcccctggagctgtaccaggcggagattgagatcctggatgtg
aacgataacgctccgagtttccccaacgcgcagctccggttggaaatcaccgaatcggcg
gctccaggagctcgcttcccgctggagagcgcccacgacccggacgtgggaaccaactcc
ctccgcggttaccggctgagcccgaacgagcactttgtcctcgaggtgcaaagccggagc
gagcgccgccaatccgccgagttagtcctggaccgtcccctggaccgggaaaccgagtcc
gttcaccggctggtgctgaccgcggtggatggaggctcgccaaaaaaatccgggagcgtc
ctcatcacggtccgggtgctggacgcgaacgacaacccgccggtgtttccgcagccggtg
tacaccgtgagattggcggagaacgctcctgccgggaccctgctcctccggctgaacgct
accgatcctgatgagggctccaatggccgaatagtctactcgttcgggcagcacgcggcg
cagacggtccgggagctgttctcgctggatccgcagaccggtcagctccgagtgcgcgct
ccgttagactatgaggactgcccggtccacgagatctttgtccaagccaaagacctggga
gcgaattcggtagccgcccattgccacgtgctgctggagctgctggatgttaacgataac
ccaccggagatcgccctcacctccgtgtccagcccggtgtccgaggacgcctccccggga
acggtcatcgccctgatcagcgttaccgaccgggacagcggagctaacggccgggtcagc
tgccgtctgagcgacactggggccggtaccgggaagctcccgttcaagctgctgccttct
ttccgccgctattacactttggtcaccgagcaccgactcgaccgggagaccgtaccggaa
tataacgtgacggtggaggcgagagacggcggaaccccgccgctgtccagtaaccggacc
atcaccgtccgggtctccgatgttaatgacaatccgccccggttcagccggtcctcatac
acggtgcgaatcccggagaataacgccccgggcgcctcgatctgttcggtcagcgccgag
gaccccgacctgaaccagaactcgtacgtgtcctactcgatcgtgaacgagccgctccgc
gggatgcccatctccacgtacgtgtcggtaaactcggataccgggaggctgtacgctctc
cgctcctttgactacgagcagctccggggtttccgagtgcaaattcaggcgcaggacgcc
ggctttacgccgctcagcagcaacaccaccgtgcacgtcctcatcgttgaccggaacgat
aacggcccggtaattgtgtcgccgctggcccgggacggctcggtggcggcggagacggtg
cctcgctcggccgggccgggctggctggcggttaaggtgacggcggtagacgcggacgag
gggccgaacggccacctctcgtaccgcctgctgcaggctaccgaccgggagctatttcac
ctggagaggcagaccggagagatccgtctggcccgccgcttcggtgctgaggatgcatcc
cagcaaactctcatcgtccaggccaaagacaacgggctaccccctctctccgccaccgtc
accatcctgttaacggcggtggacgctccgttaccggatccccggtcagactctaccgga
gagcccgagctcagcaccgacctcaccctctacctgatcgtgtccctgggctcggtctcc
ttcttgttcctggtcgctatcctgatactggctttgctccggtgtcaccgggacgccgtg
tccggtcgcgggctttcccccgccgccgcttgctgcttcccccggaggagccgttccgcc
aagcccgaggcgcgccgccagctgccggtgaccggtgccgaggtgaccgctggccacctc
ccttcgcaggtttaccgttacaccgagcgccggagcccgggatcggccagcagcgacttc
atgttcctgagagccggcggcgggcaggcaggcggcgggccgaatggtctgctctttggc
gtgggagctaatgcgccgagtgaggttaaacaacaaaacactgagtaccataacccgcca
ttgcagagacatacaggcagcagctcatgggacctggaggagacgggaggccgatacgat
ggggagatggaatcaggcaaagtgcggtcagcgggcacagcaccaaccgaaaccaatggg
ctagcccaattgccagaagctgatgttcatggatggataccaaggtatggacctcagtac
ccttaccctgaccagccccctgggtacaagctgaatgtctacatacctggcagtgcccca
ctgaagctgagtaaactgcagtccttcacggccagtgacatggacaagaacaacactttc
tcaacctttgggaaaaaaacaaaactgatttcatcacttgatatcaagccggatagaact
ttgacttaa
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