Chiloscyllium plagiosum (whitespotted bambooshark): 122556556
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Entry
122556556 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122556556
04082 Neuroactive ligand signaling
122556556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122556556
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122556556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122556556
NCBI-ProteinID:
XP_043559284
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Position
14:complement(23962788..24019302)
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AA seq
465 aa
AA seq
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MQQVFASWIAMERITALTSCVSTIFWFLFLNAAFRPSFAMSDEAKNNITIFTRILDSLLD
GYDNRLRPGLGERITQVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWEDERLKFKGPMTIL
RLNNLMASRIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLE
DFPMDAHACPLKFGSYAYTTSEVMYTWTHGASQSVVVAEDGSRLNQYDLMGQSVGTVIIK
SSTGEYVVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL
TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKSLVP
EKRKEKDREALLKKNNTYTATSANFAPNIAKDAGLATIAKSAGAESKEPKPEQKPPEPKK
TFNSVSKIDRLARIAFPLMFGIFNLVYWATYLNRELVIKGDDEHN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagtgtttgcttcgtggattgctatggagcgaattactgccctcaccagctgc
gtgtcgacgatattctggtttctgttcctaaacgcagcattccgcccaagctttgcaatg
tctgatgaagccaagaacaacatcacaatcttcacaagaatcctcgacagtcttctggat
ggatatgacaaccgtctgagaccaggcttgggagagcggataacacaggtcaagactgat
atctatgtaacaagctttgggcctgtttcagatactgatatggaatatacaatagatgta
ttttttcgccagagctgggaagatgaaaggttaaaattcaaaggacccatgactatactt
cgtttaaataatttgatggctagcagaatatggacaccagacactttcttccacaatgga
aaaaaatcagtagcgcataacatgactatgcctaataaattgttgaggataactgaagat
ggaacactcttatacacaatgagattgacagttcgtgctgagtgtcctatgcatttggaa
gatttcccaatggatgctcatgcatgtcctctaaaatttggcagttatgcatacacaaca
tcagaggtcatgtacacgtggacacacggagcttcccaatcagttgttgtagctgaagat
ggctcccgtctgaatcaatatgacttaatgggacaaagcgtggggacagtcattattaaa
tccagtacaggtgaatatgttgttatgactgctcattttcacttgaagagaaaaattggc
tactttgtaattcaaacatacttaccatgcatcatgacagttattctctcccaagtatca
ttctggttaaacagggagtctgtccctgcaagaactgtctttggggtcacaactgtattg
accatgacaactctgagcatcagtgccaggaactcactccccaaagttgcatatgcaact
gctatggattggttcattgctgtttgttatgctttcgtgttttcagcacttattgaattt
gccacagtgaactacttcacaaagaggagttgggcttgggatggaaaaagcttagttcct
gaaaagagaaaggaaaaagatcgagaggctctattgaagaaaaacaacacctacacagca
acctcagcgaactttgcaccaaacattgcaaaggatgcaggtctggcaactattgcgaag
agtgctggtgcagaatccaaagaacccaaaccagagcaaaagcctccagaaccgaagaaa
actttcaacagtgtcagcaaaattgacagactggccagaatagcatttccattaatgttt
ggcattttcaacttggtttattgggctacttacttgaatcgagaattagttatcaaaggt
gatgatgagcataactag
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