Chiloscyllium plagiosum (whitespotted bambooshark): 122556557
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Entry
122556557 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122556557
04082 Neuroactive ligand signaling
122556557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122556557
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122556557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122556557
NCBI-ProteinID:
XP_043559288
LinkDB
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Position
14:complement(24134316..24167970)
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AA seq
538 aa
AA seq
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MTAKVRKLRIWDMQMVTADMRSMVAMPTSRVGLLIFVCYTALWCIGETLINSSSNQDKEV
RVHSENITRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVDMEYTMDVFFRQ
TWIDKRLKFDGPIEILRLNNLMVNKIWTPDTFFRNGKMSIAHNMTTPNKLFRIMQNGTIL
YTMRLTINAACPMRLVNFPMDGHACPLKFGSYAYPRSEIIYTWKKGPSYSVEVPDESSSL
LQYDLVGQTVSSETMKSNTGEYIVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWIN
KESVPARTVFGEYSIQIVYFFLQRKLGYYLIQTYIPCIMTVVLSQVVFWINKESVPARTV
AGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQAQK
AQKKATQAAALSAVAGVPESEEIVSHSDSNSNLKKRFNSLAPQKESASSVEPDSNSNVQP
VLCSAPGLSPSAQPQSHTGTSKIDQYARILFPLSFGAFNLVYWIVYLSKDTMEMGSNI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaaagtgaggaagcttagaatatgggacatgcaaatggttactgctgacatg
agatctatggttgcaatgcctaccagccgcgtgggtttactgatttttgtctgttacaca
gcactgtggtgtataggagagacgctaataaatagctcttctaatcaagacaaagaagta
agagtccattcggaaaacattacacgcattctcgatagacttctcgatggatatgataat
aggctacgacccggttttggaggtcctgtcactgaagtgaaaactgacatatacgtgaca
agtttcggtcctgtatctgacgtcgatatggaatacaccatggatgtctttttccgtcaa
acttggattgataagaggctaaaatttgatggacctattgaaatacttagattgaataac
ttaatggttaacaaaatttggactccagacaccttcttcagaaatggaaaaatgtccatt
gctcacaacatgacgactcccaacaagcttttcagaatcatgcaaaacggcactattctt
tacaccatgagactgaccataaatgcagcatgtcctatgagactagtgaacttcccaatg
gacggacatgcatgtccgttgaagtttggcagctatgcctatcctagaagtgaaataatt
tacacttggaagaagggcccctcatactcagtagaagtaccagatgaatcttcaagtctg
ctgcagtatgatcttgtaggccaaactgtatctagtgaaaccatgaaatccaacacaggt
gaatacatagtgatgacagtgtattttcacttaaaaaggaagatgggatactttatgatt
cagacttacattccttgcattatgactgtaattctctcccaagtatctttctggattaat
aaggagtctgtcccagctagaacagtatttggtgaatactccatacaaatagtctatttt
ttcctacaaagaaaactaggctattatctcattcagacttacatcccatgcatcatgact
gtagttttgtctcaggttgtgttctggataaacaaagaatctgtccctgctcgtactgtg
gcgggtattactacagttttaaccatgactactctaagtatcagcgcacgccactcgcta
ccaaaggtgtcctatgctactgctatggattggttcatagcagtatgtttcgcttttgtc
ttttctgcactcatcgaatttgcagccgtaaactacttcacaaatcttcaggctcaaaaa
gcccaaaaaaaagcaacacaagcagcagcattatcagcagtagcaggagtacctgaatca
gaggagatagtatcgcattctgattccaattccaacttaaagaaaagatttaactccttg
gcacctcagaaagagtcagcatccagtgtagaaccagattctaacagcaatgtgcaaccg
gttttgtgttctgctcctggtctctctccatctgctcaaccgcaatctcatactggtacc
agcaagatcgaccagtatgccaggatccttttcccgctatcattcggagctttcaatctg
gtgtattggattgtgtacctttcaaaagacactatggaaatgggaagtaatatataa
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