Chiloscyllium plagiosum (whitespotted bambooshark): 122556635
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Entry
122556635 CDS
T08871
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpla01009
]
122556635 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122556635 (sh3rf1)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122556635 (sh3rf1)
Protein phosphatases and associated proteins [BR:
cpla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122556635 (sh3rf1)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122556635 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
Prok-RING_4
zf-RING_11
zf-rbx1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122556635
NCBI-ProteinID:
XP_043559513
LinkDB
All DBs
Position
2:8046583..8201884
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AA seq
857 aa
AA seq
DB search
MDESILLDLLECPVCLERLDATAKVLPCQHTFCRRCLQGILNSRSELRCPECRTLVDCGV
DELPTNILLVRLLDGIKHRPRRPGGGVNGNNNVNGTARVQNNGAITVPNSGTTLRDLQSI
HRVQARSPPVRGIPQLPCAKALYNYEGKEPGDLKFNKGDVIILRRQVDENWYHGEVNGVH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDILTVIRRVDENWAEG
VLGDKIGIFPISYVEFNSTAKHLIQLDKPSTSNSGSGDSGEGSSSNSGAVHNNSAQKPLD
ITKKNTKKRHSFTSLTMSNKASQSSQNRHSMEISPPVLISSSNPTAAARITELGGLSCSA
PSQVHISTTGLIVTPPPSSPVNTVAPCAFPLEGTYSAPGENYPPLPPPPSNAVVTTSASS
APRPTLAPADQVAHSRPQARPNMYVALYPYTPRKEDELELRKGEIFLVLERCQDGWFKGT
SMHTGKIGVFPGNYMAPVTRAPAAAGQSKLPVVVTAQVGRGVTTVVPVPAVTPQPKAPSN
GLDLSRPVSPTPPVPTAVISGAHVQATNPQAKVLMHMTGQMTVNQARNAVRTAAVQGQER
PTAAVTPIQAHSPASPSPATTAAPQQVVTPFTVVAAPTATRPTVALTSATAAITPPNISA
TALEGESLGIAIPSATASAANKFDKESREKKEKKGFLKLLSGASTKRKSRPSPPSSPTLE
SEQAASETLLQGAVGPEVPSSISHGRAGSCPVDTEAQGTALETLHRKTASLDSGVPIAPP
PRQPCSSMASVQLESKSVPCERYRVVVSYPPQSEAELELKDGDIVFVHKKREDGWFKGTL
QRNGKTGLFPGSFVESI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatccattctgctggacctgctggagtgtcctgtgtgcttagagcggctggat
gccactgccaaagtgttgccatgccagcacaccttctgccggcggtgcctgcagggcatc
ttaaactccaggagcgaactgcgctgcccagagtgccgaaccctggtggactgtggcgtt
gacgaactccccaccaacatcttgctggtccggctactggacggtatcaaacaccggccg
aggagacccggcggtggtgtcaacggcaacaacaacgtcaatggcactgccagagtccaa
aacaacggagccattactgttcccaactctggcaccacgttgcgggatcttcagagcatt
caccgagtgcaggcacgtagccccccagtcaggggtatacctcaactgccatgtgctaaa
gcattgtacaactatgaaggaaaagagcccggtgatctcaagttcaataagggtgacgtc
attatcctgcgaagacaagtagatgaaaactggtaccatggggaagtcaatggtgtccat
ggctttttccccaccaactttgttcagattattaaacctttacctcagcctcctccacag
tgcaaagcactttatgactttgaagtaaaagacaaggaagcagataaagactgcttgccg
ttctcaaaggatgatatcttgacagtgatacgccgagtagatgaaaattgggctgaagga
gtgttgggagacaagataggaatattcccaatttcctatgttgagttcaactcaacagcc
aaacatctgatacagctggacaagccttcaacttccaattctggaagtggcgattcagga
gaaggtagcagcagtaactcaggggctgtacacaacaattctgcccagaaacccttggac
atcacaaagaagaacaccaaaaaacggcactcattcacctcactaaccatgtctaacaaa
gcgtctcagtcatctcaaaaccgccactccatggagatcagccctcctgtcctgataagc
tccagtaacccgacagctgctgctcgcatcactgaattgggtggactctcctgcagcgct
ccttctcaggtccacattagtactaccggtttaatagtgacaccacctcccagcagtcct
gtgaatacagtagctccctgtgccttccctctggagggtacctactctgctcctggggag
aattacccaccgctgcctccaccaccttcgaatgctgtcgtaaccacctcggcatctagt
gctccacggccaacattggcaccagcagaccaggtggcacattcaaggcctcaagcgcgg
ccaaatatgtatgttgctttatatccgtacactccccgaaaagaggatgagcttgaattg
cgaaagggagagatatttcttgtgcttgaacgctgccaagatggatggttcaagggaaca
tctatgcatactggcaaaattggtgtttttcctgggaactatatggctcctgtaacaagg
gctccagctgcagcagggcagtctaagttgcctgtagtggtgacggcacaagttggccga
ggagtgaccacagtggtgcccgtgccagcggtgacaccccagcccaaagctcccagtaac
ggcctggatttgagcagaccagtcagcccgacgccgccagtccccaccgcagtcatatca
ggggcacacgtacaggctaccaacccacaggccaaggttctgatgcacatgacgggtcag
atgacagttaaccaagctcgtaatgctgttcggacggctgctgtccagggccaggagaga
ccgactgcagcagtgactccaatccaggctcacagcccagcttcccccagccctgccacg
acagcggctccacagcaggtcgtcactcctttcaccgttgtcgctgctcccacagcaacg
aggcccactgtcgctctgacctcggcaactgctgctataacccctccaaacatcagtgcc
accgctctggagggggagtcgttgggcatagccatcccatctgcaacagcctcagctgct
aataaatttgacaaggagagcagagagaagaaggagaagaaaggtttcctgaaactcctg
tcaggtgcgtctaccaagcgcaagtctcggccatcacccccatcttcgcccactttagaa
tccgaacaggcggcttcagagacattgctccagggggctgtgggtccagaagtcccttca
agtatcagccacggcagagccggatcctgccccgtggacacagaggcccaaggaacagca
ctggaaacactccatcgaaaaacagcttctttagattctggcgttccaatcgctcctcct
cccaggcaaccgtgttcatccatggcttcagttcaactggaatccaaatccgtaccatgt
gaaaggtacagagttgtcgtatcctatcctccgcagagcgaggctgagctggaactaaaa
gatggtgacattgtatttgtgcacaagaaacgagaggacggctggttcaagggtaccctg
cagcgcaatggcaaaactggcctgttccctggcagtttcgtcgagagcatctga
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