KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122556673
Entry
122556673         CDS       T08871                                 
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04010  MAPK signaling pathway
cpla04210  Apoptosis
cpla04218  Cellular senescence
cpla04620  Toll-like receptor signaling pathway
cpla04621  NOD-like receptor signaling pathway
cpla04622  RIG-I-like receptor signaling pathway
cpla04623  Cytosolic DNA-sensing pathway
cpla04625  C-type lectin receptor signaling pathway
cpla04920  Adipocytokine signaling pathway
cpla05132  Salmonella infection
cpla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    122556673
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    122556673
   04218 Cellular senescence
    122556673
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    122556673
   04621 NOD-like receptor signaling pathway
    122556673
   04622 RIG-I-like receptor signaling pathway
    122556673
   04623 Cytosolic DNA-sensing pathway
    122556673
   04625 C-type lectin receptor signaling pathway
    122556673
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    122556673
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122556673
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122556673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpla03000]
    122556673
Transcription factors [BR:cpla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    122556673
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Endonuc_Holl
Other DBs
NCBI-GeneID: 122556673
NCBI-ProteinID: XP_043559624
LinkDB
Position
14:complement(41162674..41313966)
AA seq 468 aa
MNSTSLKVCTFLNFTKMESMNHYNSADIDFVLNCQDLNYSDPAPHFRCDPYIEIIEQPKQ
RGFRFRYGCEGPSHGGLPGVSSEKNKKTYPTVKIHNYTGPVKIIVQLVTIDEPPLLHVHS
LVGRQCENGICVIQMDSEDMTASFPNLGILHVPKKDVVTIIEQQLIKSWTSDAQNGNASL
LNGNNENEMELQQKQLKKEDRERIRQQAQKQTKYMDLSVVRLMFTPYLPGSDGKFTRTLS
SVMSDPIFDSKAPNASSLRIARMAKTAGSVMGGDEVFLLCDKVQKDDIQVRFYQEDESGH
IWEAFGKFGAADVHRQFAIVFKTPKYFDIHITNPVSVFVQLRRRSDGETSQPKPFIYYPH
IKHKEHIQKKWHKSLHNCSDNFEGTPEGHAEIYSDDLGREMTVLKRPGFFMSPSYTEKDE
NIEGLQFPVDNDIMTYFPACELPSYGEIKKPLAVYNHMVTTQDARNNV
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaattctaccagcttaaaagtctgcacattccttaattttacaaagatggagagtatg
aatcactacaatagtgcagacattgactttgttctcaactgtcaagatttgaactattca
gatcctgctccacatttcagatgtgatccctacattgaaataattgaacagccaaagcag
cgaggtttccgctttcgttatggatgtgaaggaccatctcacggtggcttgccaggagtc
tcaagtgaaaagaacaagaaaacatatccaacagtgaagatacacaactacactggacct
gtcaaaattattgtacagttagtgaccattgatgagcctccacttctacatgtacacagc
ctagttggaagacaatgtgaaaatggaatctgtgtaattcaaatggactctgaggacatg
actgctagctttcccaaccttggaatccttcatgttcctaagaaggatgtagtaacaatt
atagaacaacagctgattaagtcatggacctcagatgcccaaaatgggaatgcttcactt
cttaatggaaataatgaaaatgaaatggaattgcaacagaaacaactaaagaaagaagac
agggaaagaatccgccagcaagcacagaagcagaccaagtatatggatctcagtgtcgtt
cgtctgatgtttactccatacctaccaggaagtgatggcaaatttacacgtacccttagc
tctgttatgtcagatcccatctttgacagcaaagcacctaatgcatcaagtttgcgaata
gcaagaatggccaaaacagctgggagtgtcatgggtggggatgaggtctttctgctttgt
gataaggttcaaaaagatgatattcaggtacgcttctatcaagaagatgagagtggccat
atttgggaggcatttggaaaatttggtgcagctgatgttcacagacagtttgccattgtt
ttcaagacgccaaaatattttgacattcacattacaaaccctgtctcagtatttgtccag
ttacgtagacgttctgatggtgaaaccagtcaaccaaaaccatttatatattacccacat
ataaagcacaaagagcacattcagaaaaaatggcacaaatctttacataattgctcagat
aactttgagggtacaccagaaggtcacgcagaaatatatagtgatgatctgggaagggaa
atgacagttttaaaaagacctggatttttcatgtcaccttcatatacggaaaaagatgag
aatatagaaggtttacagtttcctgtggataatgacataatgacctactttcctgcatgt
gagctgccaagttatggggaaataaaaaagccattggctgtttacaatcacatggtaaca
acacaggatgccaggaacaatgtataa

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