Chiloscyllium plagiosum (whitespotted bambooshark): 122556711
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Entry
122556711 CDS
T08871
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122556711 (ppargc1b)
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
122556711 (ppargc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
122556711
NCBI-ProteinID:
XP_043559713
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All DBs
Position
14:49833408..49979580
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AA seq
1127 aa
AA seq
DB search
MADCTLTDEDFSLFVFNYLTENAESQYGSVAGDDRLYSDFPEIDLSQLDVNDLDSVSCLS
ELQWDNDQTEITSSQYNTDDSELFEIIEEENEALLAALTETLDDIQVDDVSLSAFKELAD
GVVTDSLETASLSTPDGSPSTTKADEPSLLRKLLLAPQNVQLSYERQKGTSSTQNASSNH
KPKAHRPSIKVEGPQGSKPHSTCQRHHRTFTELHKHLTSTTCPSPFKTDDSKLTKKDQSS
PVWTSQYHQSHHPQGESEDDGDVDDNCVNDGANKELDCFNDRNGEHKQGQNILQNGTSCL
AANKSKDVVASAKCSWTKSTQFPTEAELRSVIELIKYMHSYCLPPRKYLVDMTEQGGSCN
ANCKKPNSDCSLQDLIKPSIDNQKLSNSLKSNVRPGLGRTTPNICKWNMREHSKCSILRE
LLENNIALDVSKPYRLHNPLYPVYTHSPSKVEAAVPMVVPRNECDRTYYTETIKCTLEKH
RKKCSKSRAAKTWDTTRKPGSTCLAVRRSLRLNPQANEVLKFNLDSASSGSLTRVDLKKT
LKESGSVNVQMMFNEEEKEQVAEIEIDCCGQQLCDSGASIVLDDQRHLQSCNQVRWTEEN
NNEESSFIPDLSMVPCSNIVEDHQAVTAQDFLFNETKMQETRTSRKLAKPTSLLLSPESE
SDSKDSPLESKPFEQTLSVELCGTAGLTPPTTPPHKTTRDDPFKTSIKTESPVDNRINQL
PSKNHWSSLSKRLVNKHPEQTELYAYLSKATVTPIQMEGKKVKRSYTRCFGDHDYCQLYR
SETETERNILRLYELPNSNGQQNLKEKHDSYSLYNEKRQKMSPIPNHGLNCEKVEMSKEL
PVQSSNKKSMKDQEIRAKLFKHFGYPKEAITDEEKQHMLEDTDCDLKKHCCYSDIKLQTW
VKKPDTSSWALSPTIALHKQSKSLPKDPLHPQERQLDRERTKTYSNQQRKASFGSSRTQS
RFAVKRESARNGSQDKYSYKKQIWKEENFEKANQMNKKNKAIDECRIIYVGKLACNITQA
ELKRRFEVFGEIEECKLLGQDRGDMYGYIAYRYNEDAAFALKNGHNLQKQNEPALQLCYG
GLRRFRKASYTDLDSSAEDLEPAPIKSKYDTMDFDSLLKEAQKSLTR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggattgcacgctcacggacgaggacttctctttattcgtcttcaactacctgaca
gaaaacgcagagtctcagtatggttcagtggccggtgatgaccgtctatattcagacttt
cctgaaattgacctttcccagctggatgtgaatgatcttgattcagttagctgccttagt
gaacttcagtgggacaatgaccaaacagaaataacttccagccagtataatacagatgat
tctgaactttttgaaatcatagaggaagaaaatgaggccttgctggctgctctcactgag
acactggacgacatccaagtagatgatgtgagcctgtctgcgttcaaggaacttgcagat
ggagttgtgactgattcgttggaaactgcctcattatcaacaccagatggcagcccttct
accacaaaggctgatgaaccatctctattaaggaaactccttctggctccacaaaatgtg
cagttaagctatgaacgacaaaagggaaccagttctacacaaaacgcatccagtaaccac
aagccaaaagcacatcgcccttctatcaaggttgaaggcccacagggcagtaaaccacac
agcacctgtcaacgtcatcatcgaacattcacagagttacacaagcacctgacatcaact
acctgtccttccccgtttaaaacagatgattccaaactcactaaaaaagaccaaagcagt
ccagtgtggacttcacagtatcaccagtcacatcacccacaaggtgagagtgaggatgat
ggtgatgttgatgacaattgtgttaatgatggtgctaacaaagaattggattgcttcaat
gataggaatggggaacacaaacaaggacaaaacattctacaaaatggcacgtcttgcctt
gcagccaataagtccaaagatgtggtggcatcagcaaaatgcagttggactaaaagcact
cagtttcccacagaagcagaattgcgttcagtaattgagcttatcaagtacatgcactcg
tattgtcttccacctaggaaatatctggtagacatgactgaacagggtggtagctgcaat
gctaattgtaaaaagccaaacagtgactgctctttgcaggaccttataaaacccagcata
gacaatcagaaactctccaattccttaaagtcaaatgtcagaccagggctgggaaggacc
actccaaatatttgcaaatggaatatgagagagcattccaagtgttccatactaagggag
ctattggaaaataatattgctctagatgtgagcaaaccttatagacttcataatcctttg
tatccagtttacactcactcacctagtaaagttgaggctgctgtacctatggtagtgccc
cggaatgaatgtgatcgtacttattatactgaaaccatcaaatgtacactggaaaagcac
agaaagaaatgtagtaagagcagggctgctaaaacatgggacacaacaaggaaaccagga
agtacatgccttgcggttagacgctcattaaggttgaaccctcaggctaatgaggtcttg
aaatttaatttagactcagcttcaagtggaagtttgacgagagtagatttgaagaaaact
ctaaaggagtctgggtctgtgaatgtgcagatgatgttcaatgaggaagagaaggagcag
gtagcagaaattgagatagattgttgtggacagcaactctgtgacagtggtgcaagcatt
gtgctagatgaccagcggcatctacaatcctgtaatcaagtgcgatggactgaggagaac
aacaatgaagaaagttcgtttattcctgacctttccatggttccatgctctaatatagtt
gaggaccatcaagccgttactgcacaggacttcctatttaatgaaaccaagatgcaagaa
accaggactagcagaaagctagctaaacctacaagcttgttactgagtccagagtctgaa
agtgactccaaagattcccctcttgagagcaaaccctttgaacaaactctgagtgtagaa
ctgtgtggaactgctggacttacacctccaactactccaccacacaaaacaactcgagat
gatcctttcaagacatcaataaagactgaatcacctgttgacaacagaattaaccagtta
ccatcaaaaaatcattggagttctttgtcaaaacgtcttgttaataaacaccctgagcaa
actgagctctatgcttaccttagcaaagccacagttacccccattcaaatggaaggcaaa
aaagttaaaaggtcatacactagatgctttggtgatcatgattactgccaattgtatagg
tcagagactgaaactgaaagaaatattttgagactttatgaacttccaaactccaatggt
caacagaatttaaaggaaaaacatgacagttattcactttacaatgaaaagagacagaag
atgtctcccattccaaatcatggacttaattgtgagaaagtagagatgagcaaagagctt
ccagttcaaagcagcaataagaaatcaatgaaagaccaagagataagagccaaattattc
aagcactttggttatccaaaagaagccatcactgatgaggagaagcagcatatgcttgaa
gacactgattgtgatcttaagaaacactgctgttattcagatataaagctacaaacttgg
gtgaagaagcctgacaccagttcttgggctttgtcaccaaccattgccttgcataaacaa
tccaagtcactgccaaaggaccctttgcatcctcaagaacgtcaattagacagggaacga
acaaagacctactctaaccaacagcgcaaagcatcttttggatcttcacgcacacaatcc
aggtttgcagtgaaaagggaatctgccagaaatggcagtcaggacaaatattcatacaag
aaacaaatttggaaggaagagaactttgaaaaagcaaaccaaatgaacaaaaagaacaaa
gccatagatgaatgtcgtattatctacgttggaaagctagcatgcaatataactcaagca
gaactaaagcgtcgctttgaagtctttggagagattgaagaatgcaaactacttggtcaa
gacagaggcgacatgtatggatacatcgcttatcgctacaatgaggatgctgcttttgct
ctcaagaatggacacaatttgcagaagcagaatgaacctgccttgcaattgtgctatgga
ggactcagacgattccggaaagccagttacactgacctggattccagcgcagaagacctg
gagcctgctccaattaaaagcaaatatgacactatggattttgacagcttgctgaaagag
gcacagaaaagcctgactaggtaa
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