Chiloscyllium plagiosum (whitespotted bambooshark): 122556728
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Entry
122556728 CDS
T08871
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122556728
Membrane trafficking [BR:
cpla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122556728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
SH3_1
TPR_8
SH3_9
CFAP70_TPR_C
Motif
Other DBs
NCBI-GeneID:
122556728
NCBI-ProteinID:
XP_043559743
LinkDB
All DBs
Position
14:complement(53197045..53277786)
Genome browser
AA seq
1387 aa
AA seq
DB search
MQKTESQQSHGPKTVYIANKNRYKSDVVESAKEENRTKGHNNSLDLLPGTARHTDPLGDR
VLNCNMHLNNSNSEETIECETDVNQTGGIEGTGVNTATAVAPGKQSPFVSLTSSDYCCHL
QKLSVESNAESTHGDKMATGRWEHQSGSQSLDLNTSCEEYSLGSSVEQEFPKDVTLSYCV
IRQRSGVCDSELQESARRRLCILESENKDIVALFNELSARLLSILAEKDRFILTFKTVEE
IWKFTTYLSLGFVGRCLENLLFDQHLWLNVSLVEDVKIQVEVNEADLSMMYLDLLLQEGP
FFTRILSNILKNEEEDVHICKDDLIMLKDIGNTLKWEATSLSTNETGLLPVSAPQALLYP
FYQWFLKVTAGKFNGYKEAKQHHFAQSVGTGTCVATMDYQEGEADELHFIKGERIQIIGF
LLSNLQWVLGKSLSSGETGFVQIRHMQPDQFTALAAHLLFISDEEKSSLVTFKKPDEQHC
INLLNKLCQTDISTVYRLGDLLHSTSANHLPSGLTGLVCGRNIPEINSSKPKEFQKFVPE
PDQLDEPKFCIDHNLEGLDDPATFDPLLLFLNHEEYVVHFKQFYDLSFSFVGSSLFGVTE
EKKVLQYLEMAREIAKRYNKHWAYSRICFLLGRLCAKRLRFSQARVYFEEAMTLVQGSFS
DLYLLTALYVNLASVYLKLKMKEKSHNLVEKAATLLLCIPCHIFSSENELEILNMILKKA
MIADDHLLEARVCFLISKLFLEIGKSEEMLPFAEHLQFLSNNFGSKSNKVPVDVYLILSS
IYKKKCLPELALAALRLAQPGSSNTLFDSLQKTDLVMEIVSKSNYPGYCNCQIATQAAFY
LQEASDLSTNVSDIIIQRDLYFALANLYQQYKLYERAIDFTTKSAEIAKYINDWGAFRIS
LFLAWLYILNNQPVVAFGILNSLLESSLQTYGPIELGVVHNMLAISLRRKGTLKEALENC
LCAIMAAEETGIKHNQAIANANFGSLILCCKHLTLPERYLSNSLNIYLEMQDCSLESDCV
QVLLCLGQYYVDRGLRENGRLNYELALLIAMKNNSIYYQIQALEQLCSFYENILYDKQQC
RIYYEHWLTLSQKLKDKEQEMKILKILSHLHLSFNTQSSYRLSLDYTKQNLRNFIDLGMH
YKEAKAWLLAGKLYYLMEKYELVELYFQAAIQTAQRMEDLHFIMKINEAAGDMFYNGPRE
REKAISFYRTGAIPLARMTGDTDAELRLFNKLTELSIILNRLEQAREYAIAAVRLSINTG
SQLKEQIAFYRLATVYYLYQQYEMAENYYLKALSLSPYTLQSDKEATYYMKVYLRLGDIT
LHKLKDAHDAAGYFHLAFAAATEVGNKQDLFTVSTRLANIYKNYIVNEDLHLQFVQQAKA
LATQMQK
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacagaaagccaacagtctcatgggcccaaaactgtttatattgcaaataaa
aaccggtataagtcagatgttgtggaatcagctaaagaggaaaacagaacaaagggccat
aacaatagcttggatctgctaccaggaactgcaagacacacagatccgctcggtgacagg
gtgctgaactgtaacatgcatctaaacaacagtaattcagaagaaacaattgagtgtgaa
actgacgtaaaccaaactggagggattgagggaactggtgtgaacacagccactgcagtg
gctccagggaaacaatcaccttttgtatcacttacctcttcagattactgctgccatctg
cagaagctgtctgttgaatcaaatgcagaatctacacatggagataaaatggcaacaggt
aggtgggagcatcagtctggatcacagtcattggacctcaacacaagttgtgaagaatat
tctctgggatcatctgtggaacaagaatttcccaaagacgtgacattgtcatattgtgtt
atcagacaaagatctggagtttgtgattctgagcttcaggagagtgcaagaaggaggttg
tgcattctagagagtgaaaacaaggatattgtagcgttgtttaatgaattgtcagcaaga
ctattgtccatacttgcagaaaaggatcgctttattctcaccttcaaaactgtagaagaa
atatggaaatttacaacttatctttccctagggtttgttgggcgatgtttggagaacttg
ttgtttgatcaacacctctggttgaacgtttctcttgtggaagatgtaaagattcaagtt
gaagtgaatgaagctgatttatcaatgatgtatctggatcttttattacaggaagggccc
ttcttcaccagaatcttatcgaatattctgaagaatgaagaggaagacgtgcacatctgc
aaggatgacctcatcatgcttaaagatattggaaacaccttaaaatgggaagcaacttca
ctttcgaccaatgaaacgggccttcttccggtatctgcaccacaggctcttctctaccct
ttttaccaatggttcctgaaggtcacagcaggaaaattcaatggatataaggaagctaaa
cagcaccactttgctcagtcagtcggtactggtacctgtgttgcaactatggattaccaa
gagggcgaggcagatgaattgcatttcattaaaggagaaagaattcagatcatcggcttc
ctactttctaacctgcagtgggttttgggaaagtctttatcttctggagaaactgggttt
gtccaaataagacacatgcaacctgaccaattcacagcattggctgcccatctcttgttt
ataagcgatgaagaaaaatcatctctggttacctttaaaaaacctgatgaacagcattgc
atcaatctcctgaacaagctctgccaaactgacatcagcacagtttatcgtttaggagac
ctccttcattcaacatctgcaaaccatctcccttctggtctaactggacttgtttgtgga
aggaacattcctgagataaattcttctaaacctaaggaatttcaaaaatttgttccagag
ccagatcaacttgatgaaccgaagttctgtatagaccataatcttgaaggcttggatgat
cctgcaacctttgaccctttactactattcctaaaccatgaagaatatgtggtgcacttc
aaacaattctatgatttgtccttttcctttgtagggtcttctttatttggggtaactgaa
gaaaaaaaagtattacaatatttggaaatggcaagagagatagccaaaagatacaacaaa
cattgggcttattccagaatctgtttccttttaggaagactttgtgcgaaaaggctcagg
ttctcacaggccagagtttactttgaagaagcaatgactctggtgcaagggtcattttct
gacttatatctattgactgctttgtatgtaaacttggcttctgtgtacttgaagctaaaa
atgaaagagaaatctcataaccttgttgaaaaggctgcaactcttctcttgtgcatccct
tgccatatttttagctcggagaatgaattagagatacttaacatgatacttaaaaaagcg
atgattgctgatgatcatctcctggaggcacgtgtctgttttctgatatcaaaacttttt
ttggaaattggaaagtctgaagaaatgttgccatttgctgaacatttgcagtttctttca
aataattttggttcgaaaagcaataaagtcccagtagatgtgtatttgattttaagctca
atatataagaaaaaatgcttaccagaacttgcactagcagcattaagacttgctcaacct
ggctcaagcaacacgttgtttgattctctgcagaagactgatctggtcatggaaatagtc
tcaaaatcaaactatccagggtattgtaattgtcaaatagctacacaagctgcattttac
cttcaagaggcttcagatctctcaaccaatgtgagcgatataatcattcagagagacttg
tatttcgccttggccaatctataccagcaatataagctatatgaaagggcaattgatttc
acgacaaaatctgcagaaatagcaaaatacatcaacgattggggagctttcagaatctct
ctttttcttgcttggttgtatattttaaataatcagcctgttgtggcatttggaatattg
aattcccttttggaatcatcacttcagacatatggtcctatcgagctgggagttgttcat
aacatgttggcaatatctttaaggaggaaaggtacactgaaggaagctttggaaaactgt
ctgtgtgcaataatggctgcagaagagactggtataaaacataaccaagctatcgctaat
gctaactttgggtctctgattctgtgttgtaaacatttaacactgccggaacgctacctc
agtaattctctgaatatatatttggaaatgcaagactgcagcttggaatcagattgtgtg
caagtacttctttgtttaggacaatactacgtggacagaggcttgagggagaacggtaga
ctgaattatgagctagcacttcttattgccatgaaaaacaatagtatttattaccaaatt
caggctcttgaacaactctgcagtttttatgagaacattttatacgataaacagcaatgt
agaatatattatgagcactggctgacactttcccaaaagttaaaggacaaggagcaagag
atgaaaattttgaaaattctaagccaccttcacctgtcttttaacacacagagttcctac
agattgtcattagattataccaaacagaacctgaggaattttattgatctcggaatgcat
tacaaggaagcaaaggcatggctgctggctggaaagctctattacctgatggaaaagtac
gaacttgttgagctgtactttcaggcagctatacaaacagcacagcgaatggaggatttg
cactttataatgaaaatcaatgaagcagcaggggatatgttttacaatgggcctagggag
cgagagaaagcaatatcgttttataggactggggcaatcccgctggctaggatgacagga
gatactgatgcagagctcagactttttaataaattgactgagcttagtattatactgaac
cgtttagaacaagcccgagaatatgcaattgcagctgtaagactcagcataaatactgga
agccaactgaaggaacaaatcgctttttatcgactagcaacagtgtactacttataccag
caatatgagatggctgagaactattacctgaaggcgttgtcactcagtccctacacattg
caatctgataaagaagcgacgtactacatgaaggtttacttgagactaggtgacattaca
ctccacaaactcaaggatgcacatgatgctgctggctacttccatttggcttttgctgca
gctactgaagtagggaacaagcaagatttgtttactgtttccaccagacttgccaacatt
tataagaattacattgtgaatgaagatctgcatttgcagtttgttcagcaagccaaggct
cttgctacacaaatgcaaaaataa
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