Chiloscyllium plagiosum (whitespotted bambooshark): 122556782
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Entry
122556782 CDS
T08871
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122556782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122556782
03012 Translation factors [BR:
cpla03012
]
122556782
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122556782
Translation factors [BR:
cpla03012
]
Eukaryotic type
Release factors
122556782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
122556782
NCBI-ProteinID:
XP_043559884
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All DBs
Position
14:66967044..67032225
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AA seq
437 aa
AA seq
DB search
MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGTGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISSDKVNVAGLILAGSADFKTELSQSD
MFDPRLQSKVLKLVDISYGGENGFNQAIELSAEVLSSVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDIMRYVLRCHGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGDEEDFYDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacccgaccgctgccgacaggaacgtggagatctggaagatcaagaagctc
atcaagagcctggaggccgccagagggaatggcaccagtatgatttcgctcatcattcct
cctaaagaccagatctcacgagtcgcaaaaatgttggcggatgagttcggcactgcttcg
aacattaagtctcgagtaaaccgtctgtctgtgctgggggccattacatctgtgcagcag
cgtcttaaactatacaataaagtaccacctaatggtttggttgtctactgtggaactatt
gtaacagaagaaggcaaagaaaagaaagttaacattgattttgagcccttcaaaccaatt
aacacatctctatatctctgtgacaataaatttcatacagaggctctcactgcgctactg
tctgacgacagcaaatttgggtttatcgtaattgatggtactggagctttgttcggtaca
ctccagggaaacacacgggaggtactacacaagttcactgtggatctaccaaagaagcac
ggcagaggaggtcaatcagctctgcgttttgctcgcctgagaatggagaagagacacaac
tatgtgcggaaggtagcagagacggctgtgcagctcttcatcagcagcgacaaggtgaac
gtagcaggtctaatcttggctggatcagctgatttcaaaactgaactcagccagtctgac
atgtttgatccgcgattgcagagcaaagtactgaaactagtggacatctcttatggaggt
gagaatggttttaatcaagcaatcgaactgtcggctgaagtcttatccagtgtgaaattt
attcaggagaaaaaactaatagggcgatattttgatgaaatcagccaggatacaggaaag
tactgcttcggagtggatgacacgttgaaagcgctggagatgggtgcagttgaaattctg
atagtttacgaaaatctagatataatgcgatatgttctccgctgtcacggcacagaagaa
gagaaaatcttgtacctgacacctgaacaagagaaggataaatcccatttcacagacaaa
gagactggacaggaacatgaactgatagaaagcatgcccctcctggagtggtttgccaac
aactacaaaaaatttggagctactctggagatcgtcacagacaagtcgcaagaaggatct
cagtttgtgaaaggctttggtgggattggtggtatcctgcggtaccgagtggactttcaa
ggtatggaataccagggagatgaggaagacttttatgacctggacgactactag
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