Chiloscyllium plagiosum (whitespotted bambooshark): 122556859
Help
Entry
122556859 CDS
T08871
Name
(RefSeq) transcription factor SOX-30-like
KO
K09271
transcription factor SOX15/30
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122556859
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122556859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122556859
NCBI-ProteinID:
XP_043560048
LinkDB
All DBs
Position
14:70983762..71019694
Genome browser
AA seq
637 aa
AA seq
DB search
MVPHISLKSENKFVSGLNSRKDFGDQNIAGQHVTEKIKLEDDEHYKPSSSNRGTQQTKDL
LFLKDLNGTDGSQHSDLKLPITLHPLPPGIKLQLQGSSSTCDVVKFAKLSGPLASNNLGD
IRLQTQVDPSLKINTINVPLTVPPTEAEINDMPPSKDRSGHIKRPMNAFMVWARIHRPSL
AKANPNANNAEISVQLGLEWNKLTEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKKKR
FALGVPSNVFPGSGQNIVSTTPATIYPYRPATYSVVIPNLQTNVNRPSVIDIFASGCCYY
IPTEQDEPDPSPPSTKVLAHGHCATKASPRGNKQCPPILSMPFKRAGQSQPLRMPVAQGP
RPNSIILYPQTNPVQVGLPTQSISNHPTVQPTCPPGHGRSEVHHEVPGPSAVSNCSEQRI
PTMSVDIGKRNSTNEINNTHNRVTIPEVPPQKEIPTVANCPRNPPPMPSATLPHPHAYQH
PPMGHAANLFGAAARFPFHHPYFLPGPPYFPSSTCPYSRPPYGYGDFANSMSECLGYYED
RYQKHEAMFSALNRDYPFREYPDDCQRNTDSRSNSSIEEGPHSNSLGGEEYLNSVPQLDV
GALENVFTTPMSAPSQPQRVEMVHSDDEQEGKVLKSL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggttccccacatttccctgaagagtgaaaataagtttgtttcagggttaaactcaaga
aaagactttggtgatcaaaatattgctggccaacatgtgactgaaaagataaaattagaa
gatgatgagcattataaaccttctagttccaaccgaggaactcaacagactaaagattta
ttgttcttgaaggatctgaatgggactgatggatcacaacatagtgatctaaaactgcct
attactttacacccacttccacctggaatcaaacttcaacttcaaggatcatcttccaca
tgtgatgtggtcaaatttgccaaattatctggaccactagcatcaaacaatctgggcgac
atcaggctacagacgcaagtggatccatccttgaaaatcaatactataaatgttcccctt
actgttcctcctacagaagcagaaatcaatgatatgccaccctccaaagacagaagtggg
catataaaacggccaatgaatgcatttatggtttgggctcgaattcacagaccttcgtta
gccaaggcaaaccccaatgcaaataatgctgaaattagtgtccaactcggcctggagtgg
aacaaactgactgaagaacagaagaaaccctattatgatgaagcacaaaagataaaagaa
aaacacagggaagaatttcctggatgggtgtaccagccacgaccagggaaaaaaaaacga
tttgcattgggtgttccttcaaacgtttttcctggcagtggtcaaaatattgtttcgaca
actccagcaaccatttacccctatcggcctgccacctactcagtagttattccgaattta
caaacaaatgtcaaccgtccatcagttattgatatttttgcatcaggctgttgttattac
atacctacggagcaggatgaacctgatcccagccctcctagcacaaaggtcctagcacat
ggccactgtgccacaaaagcatctcctagaggaaataagcagtgtccaccaatactctcg
atgcctttcaagagagcaggtcaaagccaacctctacgcatgccagttgctcaaggtcct
cgtccaaattcaattatactttatccacaaacaaaccctgtccaggttggtcttcctacg
cagagtatatctaaccaccccactgtgcaacccacttgtcctccaggacacggtagaagt
gaggtccatcatgaggttcctggtccaagtgcggtgtcaaattgttcagagcaaaggata
cctacgatgtcagtggatattggcaaaagaaattcgacaaatgaaattaataacacccac
aatagagttactatacctgaagtaccaccacaaaaggagatacctactgttgccaactgc
cctagaaatccaccaccaatgccttcagcaactcttccacatccacatgcttaccaacat
ccaccaatggggcatgctgctaatctcttcggagctgctgcccgatttccttttcatcat
ccttatttcttgcctggaccaccgtatttcccctcaagtacctgcccttacagtaggcca
ccctatggctacggtgatttcgcaaacagtatgtctgaatgcctgggctattatgaggac
cgctaccagaagcatgaagctatgttctctgcactcaatcgagattacccttttagagag
tatccagatgactgtcaacgcaacactgactccaggagcaatagcagcattgaggaagga
cctcactccaacagcctgggaggagaagagtacctgaactctgtgccacagttagatgtt
ggtgcgctggaaaatgtcttcactaccccaatgtctgctccatcacagccacaaagagtg
gagatggtccatagtgatgatgaacaagaaggcaaagtattaaaaagtctgtag
DBGET
integrated database retrieval system
