Chiloscyllium plagiosum (whitespotted bambooshark): 122556972
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Entry
122556972 CDS
T08871
Name
(RefSeq) uncharacterized protein LOC122556972
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
TMEM154
Motif
Other DBs
NCBI-GeneID:
122556972
NCBI-ProteinID:
XP_043560141
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All DBs
Position
14:complement(5052598..5067764)
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AA seq
1716 aa
AA seq
DB search
MATPLISQVSIIFSLCISDLVSEKLRYSIPEEMERGTFVGNVADDLGLKVWELSSRKFLL
ISDYSKQFIEVNVENGFLFVNERIDREQLCSKTAACSLFFQITLDNPLEVYPVEVEILDV
NDNSPVFSKKEFDLQISELNALGARFLLESARDLDVGTNTINTYQISPNEHFGIKVQTRR
GGSKNAELVLKRSLDREQQSMFTLVLAAIDGGIPQRSGTARIIINVMDANDNAPVFDHET
YRTSALENIANGSLVLRVHATDIDEGTNAEVTYSFSHHVNQNIRDLFKLDPVTGEIRVQG
VIDFEETNAYEFDILAVNSAPPELSAHATVAIDVIDTNDNRPNLQVTILSSAVQEDAASG
VSIALISVTDRDSGEYGEVQCQIPDSIPFKIEKYLKGNYKLITNGFLDHEITPLYNISVL
AWDGGFPPLSISKSIVVSVTDVNDNAPIFTQSSYNVYLMENNTPGASIFAVSANDADLNQ
NAEISYSILDDQKHEIPSSAYITINSKTGNIYALRSFDYEQQKHFHVAIQAQDAGSPPLS
STALVKFIILDQNDNAPIIVSPLTWNTSATVEILPKATYPGYLVTKVLASDKDSGQNARL
SYQLLEATDTGLFTVGHLSGEIRTTRAFSDQDISTERLVLRVKDNGQPSLSTTVAISFTV
TTNVTEKSFEQTDKPRRLEHFSDINSYLIIILGSISFLFLMLIVCLLVLKYRQDRNIAED
YSPTVCCYRQGNSDDGLNRPTGRHPLSYSGAVQTETYHYSVCLSPESSKSDFLFLKPCHP
TLPFNEMGVHDNNSQTIAVVFPQNNVLGSEIFICFINISPPLIKPEVGNITGSLIILVRQ
DNLMISPENTENAQYLWLQSQSERSSFWKECSFKVVCCSYWLRHFASLSANKELKQRSRS
THLLSQGLKKKIERAMANIFGIGASFIFLQTVLELVLGQIRYSIPEELEYGAFVGNIAED
LSLNVQELSARKFRTVSDSRKQYMEVNLKNGILFVNARIDREQLCKKSSTCFLSFQIVLE
NPLEMHRVSVEILDINDNAPRFSKDEYVLQIIEAIAPGMRFPLESAHDADVGRNAVSIYQ
ISVNEHFSLKFQTRNDASTSAELLLEKPLDREEQSTFDLVLTAIDGGVPQRSGTTRIRIY
VMDVNDNAPVFDHETYRVNVEENTPKGTLVVELNAVDLDEGTNAELTYSFTSHASQKARE
VFKLDPITGEIRVEGVLDFEELAIYELDVETVDKGSYPMLGRAKVIVELIDTNDNAPEIE
VTSLSSTVSEDALPGTRIATINVRDADSSENGQTQCDVDMDVPFQLQMTMSNNYKLVTSR
TLDRETTPVYNISILARDRGSPPLVTKKLLIVSVSDVNDNAPRFTQSSYNVFVMENNNPG
ASIFAVTASDADLDQNGEVSYLILKKQIKGGSPAPYITINSKSGNINALLSFDYEKLKNF
EFKVQARDAGNPPLSSTAIVNVIILDQNDNAPIIVSPSAWNNSSAVKILSQSLYPGNLLT
KVIATDADSGQNMRLSFKIIEATDPSLLSIGLFTGEIKAVRGYKQYDSTMQRVVILVKDN
GQPSLSSTATVYFSIMPNGTDKLSVYSHQPRNREQFSDLNVYLIIIFGSTSFMFLVIIIF
LVVLKCKQARSSNYYDSTNYCCCSQRESNAAFNRRAIPKEMNSYPRGPLTVPIPEGNQYT
LCLSPESSKSDFLFLKPCEITLPLNDINVHGSSVGK
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccactgattagccaggtttccataattttttcgctatgcatttctgacctg
gtctccgaaaagcttcgctactcgattcccgaggaaatggaacgtggaacctttgttggc
aacgtcgctgacgatctaggattaaaggtttgggaattatcgagccgcaaatttctgctg
atttctgattactcgaagcaattcatagaggtaaatgtagaaaatggtttcttgtttgtt
aatgaaagaatcgacagagaacagctttgtagcaaaaccgctgcatgttctctctttttc
caaatcacgctcgataatcctttggaagtgtatcccgttgaagtggagatactagacgta
aatgataattcacccgtcttttccaaaaaggaattcgatttgcaaatcagtgaattaaac
gcgctgggggcacgtttccttctcgagagcgcgcgtgatctggatgtgggtacaaataca
atcaacacataccagatcagtccgaacgagcacttcggtataaaagtgcagacaagaaga
ggtggcagtaaaaatgccgagctggtattaaagaggtctttggaccgtgaacaacaatca
atgtttactctggtattggcggctatcgatggtgggattccgcagagatctggcacagcg
cgaatcatcattaatgtcatggacgcaaatgataacgcccccgtattcgatcatgaaacc
tacaggacgtcagcgctagaaaacatcgcgaatggctctttggtgttaagggttcatgct
actgatatagatgaaggaacaaacgcggaggtaacatattctttctcacatcacgttaac
caaaatattcgcgacttgttcaaattggaccctgtgactggagagattagagttcaagga
gtaatagattttgaagaaacaaatgcatatgaatttgacatcctggcggtgaattccgct
ccacctgaattgtcagcccatgcaactgttgctatcgatgtcattgacactaacgataat
cgccctaacttgcaagtaacaatactatcgagtgctgtgcaggaagatgctgcttcgggg
gttagtatagctctgatcagcgtaacggatcgcgattctggagaatatggggaagttcag
tgtcagattcctgacagtattccgttcaagatcgaaaaatatctgaagggcaactacaaa
ttgattaccaatggctttctggatcatgagattaccccactgtacaatatctccgtttta
gcctgggatggtggatttcctcctctttcaattagtaaatccattgtggtttcagttact
gatgtaaatgacaatgcaccaatatttacacaatcgtcatacaacgtgtatctgatggaa
aataatactcccggtgcttctatatttgctgttagtgcaaatgatgctgatttgaatcag
aatgcggaaatatcttattccattctagacgatcaaaagcacgaaataccttcttccgcg
tacatcacgattaattccaaaaccgggaacatttacgcactgcgctccttcgactatgag
caacagaaacatttccatgtggcaattcaagctcaggatgctggatcacctccactgagc
agcactgcccttgtaaagtttattatcctggatcaaaatgacaatgcacccattattgtt
tcacctttaacttggaacacatcagcaacagtggagatcctgcccaaagcaacatatcca
gggtacctggtcaccaaggtacttgcgtctgacaaagattctggccagaacgcaaggctt
tcctaccagttactggaagccactgatactggcctttttactgtgggacatctctctgga
gaaatcagaacaacacgagcatttagtgatcaagatatcagtacagaaagattggtcctc
cgtgtgaaggataatggacagccaagtctttccactacagttgcaatctcctttaccgta
actaccaacgtaactgagaaatcgtttgaacaaactgataagcccagacgcctggaacat
ttttctgatataaacagctacctcatcattatattaggatcaatttcctttttatttctc
atgctcattgtttgtttgctcgtcctgaagtatcgacaagatagaaatattgctgaagat
tacagccccacagtttgttgttatcgtcagggtaattcagatgatggcttgaatcgacca
acaggacgccatcctttgagttatagtggggccgttcagactgaaacttatcattacagt
gtgtgtttgtcaccagaatcatcgaagagtgattttctctttttgaaaccctgtcatcct
acgttgccgttcaatgaaatgggtgttcatgacaacaactcccagacaatcgccgtggtg
tttcctcaaaataatgtcctcggctcagagatcttcatttgcttcatcaacatatctccc
cctttgataaagccagaagtgggcaacattacgggaagcctcattatattggtgcgacaa
gacaatttaatgataagtccagaaaatactgaaaatgctcagtatctgtggctgcagagt
cagagcgaacgttccagtttttggaaggagtgcagctttaaggtcgtttgttgcagttat
tggttgcgacactttgcgtcgctgtccgccaataaggagctgaaacagcggtcgagatct
acccacctcctctcgcagggattaaagaagaagattgaaagagcaatggcgaacatattc
ggcatcggagcgtctttcatttttctgcaaaccgtgttggaactggttttggggcaaatt
cgctactcgattcccgaggaattggaatatggggcctttgttgggaatattgctgaggat
ttgagtctaaacgttcaggaattatcggcccgcaaatttcgtaccgtctctgacagcaga
aagcaatacatggaggtaaatctgaaaaatggaattttgtttgttaatgcaagaatagac
agagaacagctctgcaaaaaaagctctacctgcttcctttccttccaaatagtgctggaa
aatcctttggaaatgcatcgcgtttcagtggaaatactagatataaatgataacgcaccg
cgtttttcaaaggacgaatatgttttacagattattgaggcgattgcgccaggaatgcga
ttccctcttgagagcgctcacgacgcggacgtaggcagaaatgcagtcagcatttaccag
atcagcgtaaacgagcatttcagcctcaaatttcagaccagaaatgatgcgagtacaagt
gccgaattgctgctagaaaagcctttggatcgtgaagaacagtcaacctttgatcttgtg
cttactgccattgacggtggggtgccccagagatccggtactactcggattcgaatttat
gttatggacgtcaatgacaacgcacctgtgtttgatcatgaaacatacagagtcaatgtt
gaagaaaacactcctaaaggtactttagttgtggaactcaatgctgttgatttagatgaa
ggcacaaatgctgagctaacatattctttcacaagtcacgcttcgcaaaaggctcgtgag
gttttcaaattagacccgataactggagaaatcagagttgaaggagttctagattttgaa
gaattggctatatatgaacttgatgtagaaactgtggataaaggttcctatccaatgctc
ggacgtgccaaagttatcgtcgaattaattgatacgaatgacaatgcccccgagattgag
gtgacgtcattatccagtacagtatcagaagatgctctaccagggaccagaatagctaca
atcaatgtcagggatgctgactccagtgaaaacggacaaactcaatgtgatgttgacatg
gatgtaccatttcaattgcagatgactatgagcaacaattataaattggtcactagtcgt
actttggatcgggaaacaacaccagtgtacaatatatcaattttggctcgtgacagagga
tctccgcctctagttacaaagaagcttctaattgtatcagtttctgatgtaaacgacaac
gctccaaggtttacacaatcctcatataacgtgtttgtaatggaaaacaataatcctggt
gcttctatatttgccgtcactgcttcggatgcagatttggatcaaaatggggaagtgtct
tatcttatcttgaaaaagcaaataaaaggtggatctcccgcaccttatattacaattaac
tcaaagagtggaaatattaatgctctactgtcattcgactatgaaaagttgaaaaacttt
gagttcaaagttcaagctcgcgacgctggaaatcccccattgagcagtactgccattgtg
aatgttattattctggaccaaaatgacaatgctcctattattgtttcgccttcagcgtgg
aataattcatcagctgtgaagattctgagccaatcgctatatccggggaatttgctcacc
aaagtaatcgcaaccgatgcggattcaggacagaacatgcggctttccttcaaaattatt
gaagccacggatcccagtctcctcagtatcggcctgttcactggagaaataaaagcagtc
cgaggttataagcaatacgactccaccatgcaaagagtagtgatcctggtgaaggataat
ggacagcccagtctctccagcacggcgacagtctacttttcaatcatgcccaatggtaca
gataaactctctgtgtatagtcaccaacccagaaatcgtgaacaattttcggatctgaat
gtttatttgatcatcatatttggttccacatcctttatgttccttgtaatcataattttc
ctagtggtactgaagtgtaaacaagccagaagttcaaattactacgattctacaaattat
tgttgctgcagccagagggagtcgaatgctgcttttaatcgaagagctattccgaaagaa
atgaacagttatcctcgtggtcctctgactgtccccattcctgaaggaaatcagtacact
ctctgtttatctccagaatcatccaaaagtgatttcttattcttgaagccttgcgagata
acgttacctcttaatgatatcaatgttcatggaagcagtgtaggaaaataa
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integrated database retrieval system
