Chiloscyllium plagiosum (whitespotted bambooshark): 122557043
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Entry
122557043 CDS
T08871
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122557043 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122557043 (nup62l)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122557043 (nup62l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nup49_C
DUF4164
Laminin_II
Motif
Other DBs
NCBI-GeneID:
122557043
NCBI-ProteinID:
XP_043560210
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Position
15:1990082..2052977
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AA seq
592 aa
AA seq
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MSFNFANPGGGSSFSFTAPKTGAGTGSAFSFGSTTAASQGPFGFGTPQQVTATATSAPSA
GLFSFSTPTTGVTSSTGFCLPTQPATTTATGGFSLGANKPSLGFGGTGCNPVSGFSFGNA
PATSTTTTCPSLSSGSVAQTTAPTGFSFGTNPAQPAVGGFGLGACTTPQSTSSTGFGFTS
TLAAPTQTTAAGGFTFGAATNGTPTLTGFSFGTPATTAAPKPVAPLSLGAQSTGFTFGSS
TVASCANTTASTTQGFSFNAKPAGTSTGTSTAGPTLFASVVSSVPPATSTTTGFTLTSGT
TPTPAAATTSTSFGFKPTSTALPITTAASLASTSAAATTCNTGFSLGLKTPASFSLTPGP
AVTAASASATATTAVGTTTATITTTTIAPVASSTPPVMSYAQLESLINKWSVELEDQEKQ
FLHQATQVNAWDRMLIENGEKITALHREAEKVKLDQKRLDQELDFILSQQKELEDLLEPL
EQSVRDQHGTIYLQHADEEREHTYKLAENIDAQLKRMAQDLKEIIQHLNSTSSSSEISDP
LQQICKILNAHMDSLQWIDQSSVLLQKKVEDVSKQFEIRRREQERNCRITFD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaactttgcgaatccaggtggaggcagcagcttttccttcactgctcccaag
actggtgcaggaacagggagtgccttctcttttggcagtaccactgcagcctcccaagga
ccctttggctttggaacaccacagcaggtcacagccacggcaacttcagcacccagtgct
ggtctgttttcattcagcacaccaactactggagtcacgtcatccactggattctgcctg
ccgacacagccagcaacaaccaccgctactggaggcttctctcttggagcgaacaagcca
agtttagggtttggtggcacaggatgcaatccagtctctggcttctccttcggtaatgct
cctgctaccagcaccaccacaacttgtccatccctgtcctctggatcggtagcgcagacc
acagcacctacaggcttcagtttcggcaccaatccagcacagccagctgtgggaggtttc
ggcctgggtgcatgtaccacgcctcagtcaacatcatctactgggtttggattcacctct
accctggctgccccaacccagactacagcagctggtggatttaccttcggtgctgctaca
aatggaacgcccactcttactggctttagctttggcacgccagcaactacagcagctccc
aaaccagtggcaccactctctctgggtgcacagtctacaggttttacttttggctcatct
acagtggcatcatgtgccaacacaacagcttccacaacgcagggcttctcatttaatgca
aagccagcaggaacttcgactggtacatcgacagctgggccgactctgtttgcctccgtg
gtgagctcagtacctcctgccacttcaacgacaactggatttacactcaccagtggtacg
actcctactcctgcagctgctacaacttctacttcatttggatttaagccaaccagtaca
gccctgcccatcaccacagctgcaagcctggcttccacctctgcggctgcaaccacctgc
aacactggcttttctctgggactgaagacaccagcaagtttctccctcacaccagggcct
gctgtgacagctgccagtgcgagtgccacagccaccactgctgtgggcactactactgcc
accattaccaccaccactattgctcctgtggctagtagtactcctccagtaatgtcgtat
gctcaactggagagtctcatcaacaagtggagtgtggagcttgaggaccaagagaaacaa
ttccttcaccaggccacccaggtcaatgcttgggaccggatgctaatcgaaaatggagag
aagataactgccttacaccgagaagcagagaaagtgaagctggaccagaagagactggat
caagagcttgatttcatcctgtcacagcagaaggaactggaagatctgctggaaccactg
gagcaatccgtcagggatcaacatggcaccatttacctgcagcatgctgatgaagagcga
gagcacacttataagcttgcagagaatattgatgctcaactgaagaggatggcccaagat
ctgaaggaaattattcaacatctcaacagcaccagcagttcctctgagatcagtgatcca
ttgcaacagatttgcaagattctgaatgcccacatggattctctccagtggattgatcag
agctcagtcttgctgcagaagaaagtggaggatgtctcaaaacagtttgaaatccgtcgg
agagaacaagagaggaactgcagaattacatttgactga
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