Chiloscyllium plagiosum (whitespotted bambooshark): 122557046
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Entry
122557046 CDS
T08871
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04080
Neuroactive ligand-receptor interaction
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122557046
04082 Neuroactive ligand signaling
122557046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122557046
Ion channels [BR:
cpla04040
]
Ligand-gated channels
GABA-A
122557046
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122557046
NCBI-ProteinID:
XP_043560218
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Position
15:2542978..2796879
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AA seq
473 aa
AA seq
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MAEQVLGFFVLYSFLVIALLSKSSLTVHGFSKKHARPAPTEGKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWKDERLKFKGPMRILPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTINAECPMHLEDF
PMDTHACPLKFGSYAYTRSEVVYVWTHGQKESVVVAEDGSRLNQYDLLGQTVGMEIIQSN
TGEYIIMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWPWDGRKAMEVQ
ELKKREPVTLAKKTNNTYNIVGTTYTLNITKDPSLATISKSAGTHAHTKLAKVEEKLLES
RKTYNSVSKVDKMSRIVFPVLFVIFNLVYWATYVSREPVIEGMIPQKKTPLKA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagttttgggattcttcgtactctatagcttccttgtgatagcccttctt
tccaagagcagcctcactgtgcacggattttcaaaaaaacatgctcgaccagcaccaaca
gaggggaaggacaacattaccatcttcacccgaatcctggatcgcctgttggatggatat
gacaataggctgcggcctggtcttggagaaagcgtgactgaagttaaaacagacatctac
gttacaagttttgggccagtgtctgacacagacatggagtacaccgtcgatgtattcttc
cgacagagctggaaggatgaacggctcaaatttaaaggacccatgcgcatattgccgctg
aacaacctgctggccagcaaaatatggactccagacacattcttccacaatggcaagaaa
tcggtggcacacaacatgaccactcccaacaagttgctgaggctggtggataacggcacc
ctgttgtacaccatgaggcttacaattaatgcagagtgccccatgcatctggaggacttc
cccatggatacacacgcctgcccactgaaattcggcagctatgcctataccaggtctgaa
gtggtctacgtctggacccatggtcaaaaggaatcagtagttgttgctgaggatggatcc
agattgaaccaatatgatctgttgggacagaccgtcgggatggagattattcaatcaaat
acaggtgaatacattatcatgacaacccacttccatctgaagaggaagattggttacttt
gtgatccagacgtatctgccctgcattatgactgtgattctctcccaggtctccttctgg
ctgaacagggaatccgtccctgcacgcactgtgtttggagtcaccacagtgctgaccatg
acaaccctgagtatcagtgccaggaactccttacccaaggttgcctatgcaacagccatg
gattggtttattgccgtctgctacgcatttgtattctcggcactgattgaatttgcgacc
gtgaactactttaccaagcggagctggccatgggatggcagaaaagccatggaagttcag
gagctgaagaaacgggaaccggtcaccctggccaagaaaaccaacaacacgtacaacatc
gtagggacaacgtacactctgaacatcaccaaggatcccagtctggccaccatctcgaag
agcgcagggacgcacgctcacaccaagctggccaaagtggaggagaaactgctcgagagc
aggaagacatacaacagtgtcagcaaagtcgacaaaatgtcccgaattgtatttcctgtt
ctctttgtcatttttaacctggtttattgggccacatatgtcagcagggagccagtcatt
gaaggtatgattccacagaaaaagactccacttaaggcttga
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