Chiloscyllium plagiosum (whitespotted bambooshark): 122557141
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Entry
122557141 CDS
T08871
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122557141 (pcdh19)
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Protocadherins
122557141 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
SGBP_BT4661-like
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
122557141
NCBI-ProteinID:
XP_043560427
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All DBs
Position
15:18498327..18614811
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AA seq
1097 aa
AA seq
DB search
MGWLLAPLFALLLWARAAAAVVNLKYSIVEEERAGTVIGNIAKDAGLSTWEQTVPLFRVL
SNSAPHLVEINPLTGLLVTKQKIDRDLLCRQSAKCLISLEEMVNSMEIYVIKVEIVDLND
NSPSFPAERIDLEISETASPGTRIPLESAYDPDAGQYGVQSYRLSPSELFALEIKSRGDG
SRFAELVVEKPLDRERQSRYSLQLSAVDGGEPPRVGSTQLNIRVIDSNDNYPRFERAAYT
VSVLENAPLGSLVTELKASDPDEGSNGQVVYSFNSYVPERTRQLFALEPRTGALTVRGDI
DYEEGTVYEIDVQAKDLGPNSIPAHCKVTVHVVDVNDNVPVISLFSVNSGTVEVSEAAPP
GYVIGLVRVSDRDSGPNGRVRCQLLGEPPFRLQEYESFYTVLVDGRLDRERRDLYNLTVL
AKDSGSPSLQSSRSFGVRVSDENDNPPVFAQPVYQVMVQENNTPGSHLLSVSARDPDLGS
NGTVSYQVAPSQVKDMPVFTYVSINPTSGDVYALRSFNHEQTRSFEFQVLARDGGAPPLQ
SNATVRVLVLDVNDNVPLISAPPLVNGTAELYIPRGVPAGYLVTVLRADDYDDGDNGRLS
YEIAEGARGHFHVGAANGEIRTSRRFAEGADTTYELVVVAQDHGKPALSSTALIVVYLSP
ALDAQESGGSLNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRVAEYSYGQ
QKKPKKKGKISKNDIRLVPRDMEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSEAT
FLNVENQNSRNAAGNHVYHTFTSTQSSQQQPDLIINGMPLPESENYSIESSYVNSRQHLI
KSSSTFKDLERNSLKDSGHEESDQTDSEHDAHRGLYCDTAINEVLNTTLNSTGSQVPDQD
QNEHFTCIEECRILGHSDRCWMPRVAVASRAKSPDHGKNVIALSIETTSVDSEPYENGNS
KRTFATFGKDPRDRIAENDKTDLKGKRTFDLPICSPKVNGSVSSSQETSNGIDISSPAST
PVHLGSPLSNRPAVTYSVMHCPITCDLDRPVNQTSSHLSEPGSREADSEHVQEINHLLHD
CREKDSPGIKRIQDIVL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgggttggttgctagcgccgctgttcgccctgctcctgtgggctcgggctgccgccgcc
gtggtcaacctgaaatactcgatcgtggaggaggagagagcgggcacggtgatcggcaac
atcgccaaggacgccggcttgtccacctgggagcagacggtgcccctgttccgcgtcctc
tccaactcggcgcctcacctggtggagatcaacccgctgaccggcttgctggtgaccaag
cagaagatcgaccgcgacctgctgtgccgccagagcgccaagtgcctcatttcgctggag
gagatggtcaactccatggagatctacgtgatcaaggtggagatcgtggacctgaacgac
aactcgccgagcttccccgccgagaggatcgacctggagatctcggagacggcgagcccg
ggcacccgcatcccgctggagagcgcctacgacccggacgccggccagtacggggtgcag
agctaccggctcagcccgagcgagctgttcgcgctggagatcaagagccgcggggacggc
tcccgcttcgccgagctggtggtggagaagccgctggaccgcgagcggcagtcccggtac
agcctgcagctgagcgcggtggacggcggcgagccgccgcgggtgggcagcacccagctc
aacatccgagtgatcgactcgaacgacaactacccgcgcttcgagagggccgcctacacg
gtcagcgtgctggagaacgcgccgctcggctccctggtcaccgagctgaaggcgtccgac
ccggacgagggcagcaacggccaggtcgtctactcgttcaacagctacgtgcccgagcgg
acccgccagctcttcgcgctcgagccccgcaccggcgcgctcaccgtccgcggcgacatc
gactacgaggagggcaccgtctacgagatcgacgttcaggcgaaggacctggggccgaac
tccatcccggctcactgcaaggtcaccgtgcacgtggtggacgtgaacgacaacgtgccg
gtgatcagcctcttctcggtcaacagcggcacggtggaggtcagcgaggccgcgccgccc
ggctacgtgatcggcctggtgcgggtgtccgaccgcgactccgggcccaacggccgcgtc
cgctgccagctgctgggcgagccgccgttccgcctgcaggagtacgagagcttctacacg
gtgctggtggacggccgcctggaccgggagcggcgggacctctacaacctgacggtgctg
gccaaggacagcggctcgccctcgctgcagtcctcgcgctcgttcggcgtcagggtgagc
gacgagaacgacaacccgccggtgttcgcgcagcccgtctaccaggtgatggtgcaggag
aacaacacgcccggctcccacctgctctcggtgtccgcccgcgaccccgacctcggctcc
aacggcaccgtctcctaccaggtcgccccgtcccaggtcaaggacatgccggtcttcacc
tacgtctccatcaacccgacctcgggcgacgtctacgccctgcgctccttcaaccacgag
cagacccgctccttcgagttccaggtgctggcccgggacggcggggcgcctccgctgcag
agcaacgccacggtccgcgtgctggtgctcgacgtcaacgacaacgtgccgctcatctcg
gcgccgccgctggtcaacggcaccgcggagctctacatcccgcgcggggtgcccgccggc
tacctggtcaccgtgctcagggcggacgactacgacgacggcgacaacggccgcctgagc
tacgagatcgcggagggggcgcgcgggcacttccacgtgggcgcggccaacggcgagatc
cgcacgagccgccgcttcgccgagggcgccgacaccacctacgagctggtggtggtcgcc
caggaccacggcaagcccgcgctctcctccaccgccctgatcgtggtgtacctgtcgccc
gccctggacgcacaggagtccggcggctccctcaacctctcgctgatcttcatcatcgcc
ctgggctccatcgccgccatcctcttcgtcaccatgatcttcgtggcggtcaagtgcaag
cgggacaacaaggagatcaggacctacaactgcagggtggccgagtactcctacgggcag
cagaagaagcccaagaagaagggcaagatcagcaagaacgacatccgcctggtgcccagg
gacatggaggagaccgacaagatgaacgtggtcagctgctcctccctcacctcctccctc
aactacttcgactaccaccagcagactttgcccctggggtgccgcaggtcggaggccacc
ttcctgaacgtggagaaccagaactcgaggaacgccgccgggaaccacgtgtatcacacc
ttcaccagcacccagagctcccagcaacagccagatctcatcatcaacggcatgccactt
ccagagtcagaaaactactccatcgaatcaagctatgtaaacagcagacagcaccttatt
aaaagtagttccacattcaaggacctggaaagaaacagtctcaaggacagtggacatgaa
gaaagtgaccagactgacagcgagcatgatgcgcatcggggcctgtattgcgacacagct
atcaatgaagtgctaaatacaactctcaattccactggttctcaggtacctgatcaagat
cagaacgaacattttacctgcatagaagaatgccggattttaggtcactcggacagatgt
tggatgcctcgggtggcagtagcaagccgtgccaaatcacctgaccatggaaaaaacgtt
attgcgctgtcgatagaaaccaccagtgtggactctgaaccctatgaaaatggcaattca
aagagaacttttgcaacttttggcaaagaccccagggatcgcattgctgagaatgataaa
acagatttgaaaggaaagaggacatttgatctacccatctgtagccccaaagtgaatggt
tcagtctccagcagccaggaaacaagtaatggtattgacatttcaagtcctgctagcaca
cctgtgcatttgggcagccccttgtctaacaggcctgcggtcacgtactctgtgatgcac
tgcccaataacatgtgatctcgaccgacctgtcaatcagacctcctcacatctgtcagag
ccaggatccagggaagcagactcagagcatgtccaagagatcaaccacctcctgcatgat
tgcagggaaaaggactcaccaggcattaaacgaatacaggacattgtgctgtga
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