Chiloscyllium plagiosum (whitespotted bambooshark): 122557183
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Entry
122557183 CDS
T08871
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122557183 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122557183 (dkc1)
03032 DNA replication proteins [BR:
cpla03032
]
122557183 (dkc1)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
122557183 (dkc1)
Prokaryotic type
122557183 (dkc1)
DNA replication proteins [BR:
cpla03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
122557183 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
122557183
NCBI-ProteinID:
XP_043560519
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All DBs
Position
15:complement(29535491..29560408)
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AA seq
535 aa
AA seq
DB search
MADGDGKAAFKKQKKQRKKSGEGIGSIQQETDFLIEPQTKTVKLDTSHWPLLLKNFDKLN
VRTTHYTPIPNGCSPLKREISEYVRSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGT
LDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIENEHQLSRGLEMLTGALFQR
PPLIAAVKRQLRVRTVYNSKLVEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQM
QELRRVRSGVNSEMDNMVTMHDVLDAQWQYDHNKDETYLRRVIYPLEKLLVTHKRLVMKD
SAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVVTTKGEAICIAIALMTTAVISTCDHGVV
AKIKRVIMERDTYPRKWGLGPKASQKKMMIKQGLLDKHGKPNGSTPESWKKDYIDYTRGS
STAPNDATQTQPVKRKRESESESDEPAVSSTPTTQQLTPELGKKDKKKKKKEKKQKLLQE
TEVKPESDNPEPTLLTPKKEKKKKKKEEKIGESGTGNTESSKKKKKKKEKIESGE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagatggtaaagcagcttttaaaaaacagaagaagcaaaggaagaaaagc
ggggaaggaattgggagcatccaacaggagacagactttctaatcgaaccacagacaaaa
acagtgaaactagacacatctcattggcctttgttgctaaagaattttgacaagcttaat
gtgcggacaacacattacactcctattccaaatggctgctcaccacttaaaagggaaatt
tctgaatacgtaaggtcaggatttattaaccttgataaaccagcaaacccatcttcgcat
gaagttgtggcatggatacgcaggattctgcgggtggaaaagactggtcacagtggaacg
ttggatcccaaagtgaccgggtgtctaattgtttgtatagaacgagcaacgcggctagtc
aaatcccagcagagtgctggcaaagagtacgtgggaattgttcggctgcacaatgctatt
gaaaatgaacatcaacttagccggggcttggagatgctgactggagccttattccaacgt
ccacctctaattgctgctgtcaagagacaattaagagtccggactgtctacaatagtaaa
ctagttgagtatgatccagagagacggttaggaattttttgggtgagctgtgaagcaggg
acctatatcagaacactgtgtgtacatcttggcctgttgcttggagttggaggtcaaatg
caggaactgagaagagtacgatctggtgtaaacagtgaaatggataacatggtaacgatg
catgatgttttggatgcccagtggcagtacgatcacaacaaggacgagacctatctgcgt
cgtgtcatctatccccttgaaaaactgttggtgactcacaaaaggcttgttatgaaggat
agtgcagtaaatgctatttgttatggtgccaagattatgcttccaggtctgctgcgttat
gaagatggaattgaggtgaaccaggagatcgttgttgtgacaacaaagggcgaagccatt
tgtattgcaatagcattaatgacaacagcagtaatatcaacatgtgaccatggtgttgta
gcaaagattaaacgagtgatcatggaacgggatacatatccacgtaagtggggcctggga
ccaaaggcaagccagaagaaaatgatgattaagcagggtttgttagataaacatggcaaa
ccaaatggaagtactccagaatcgtggaagaaggactatatagattatactcggggaagt
tcaacagcacctaatgatgcaacccaaacgcaaccagtgaagagaaagagagagagtgaa
agtgaaagtgatgaacctgcagtttcctccacccccacaacacaacaattgacgcctgaa
ctgggcaagaaagacaaaaagaagaagaagaaagaaaagaagcaaaagttgttacaagaa
acagaggttaagcccgaaagtgataatccagagcctaccttgctgacaccgaagaaggag
aagaagaaaaagaaaaaagaggaaaaaattggagaatctgggactgggaacactgaaagc
tctaaaaagaagaaaaagaaaaaggaaaaaattgaatcaggcgagtga
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