Chiloscyllium plagiosum (whitespotted bambooshark): 122557294
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Entry
122557294 CDS
T08871
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122557294 (zc3h12b)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122557294 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
122557294
NCBI-ProteinID:
XP_043560774
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All DBs
Position
15:complement(46426694..46519815)
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AA seq
956 aa
AA seq
DB search
MLDFVIPLSASGRLENLIPHIERLFRVKISAGPAAESSRWVHIEQAAETQEGLRKAKDYI
LSLCSPEHKKCENITSTLRKQLIELKDTIEYESQAVLEIKEKSVEITGGQINVMTAWSMF
EKLNMENNSSKEAKSLRLEIGDCSADSEDWTSSESDSEQPPNKKEGTPIVSKPHRQLCRS
PCLERPVLSKCSVLQEFQSEDRKSKFDDDDDDKAASLDKEYQAKMEFALKLGYSGEQIQT
VLNKLGSDALINDILAELVRLGNKSESEPQPPSVGNAGTLVSRGQCVKEVTSPELSLEDE
VVDDSDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAAEYFLEKGHKDITVFVPAWRKEQS
RPDAPIKDQELLRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERVNQPQRSVADELRASAKLSAVKTMSEGALAKCGIAISGVKGE
NISEIKRVAPKRQSDPSIRSVVCEPEERLTPSRRLETNSVPSLVTASSVPTFQQNKNHAA
SAMSTRSASSPVPCSKQFTHQKSSQEHLSTLNYPPILVTNSHGNSVSYTEQYPKYDSTLD
TGYYSMINDFSNLSISSMRNHDGYYGLESDHGLYPRNTSPHTETCITSNDSYSSYSDLAY
LGTVEPGPEDNVKTHQPQSQNRLQPFIHGYHEPITRVQSYGSEESKQPQRKQSISHLVPH
IQHSAAGARSSCPGDYPVPQNIHPSANNQPGRALVMTRLDSISDSRLYESNPMRQRRPPL
CREQHTSWDHLPCVTDSYRYPSYPLTNNLMQPSYEPGMFRSMPEKIEQIWRSPWQGMPNE
QQDHLAIREHQYQTYRNLCNIFPADIVHAVMEKNPHVTDPQHLAAEIVAKQLRSGR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgctggatttcgtgatcccactgagtgccagcggtaggctggagaacctcatccctcac
atagagaggctcttcagggtgaagatcagcgctgggcctgcggcagagagcagcagatgg
gtccatatagagcaggcagcagagacacaggaggggctcaggaaagcaaaggattatata
ctatcactgtgctctccagaacataagaagtgtgagaacataacatcaacattacggaaa
cagttaattgagctgaaagataccattgaatatgaaagtcaagctgtactggaaataaaa
gagaaaagtgtagagataacaggaggacaaattaacgtaatgactgcctggtcaatgttt
gagaagttgaatatggagaacaactcctccaaagaagccaagagtcttcgtctggagatt
ggtgactgcagcgctgattctgaggactggacaagctcagaaagtgattcagaacaacct
cctaataagaaggaagggactccaattgtgagcaaaccacaccggcagctctgtcgctct
ccttgccttgaacggccggttctttccaaatgcagtgtcctacaggaatttcagagtgaa
gacaggaaatccaaatttgatgatgatgacgacgacaaggctgctagtttagataaggaa
taccaggccaaaatggagtttgccttaaaactaggatattcaggagaacagatacaaact
gtgctcaataaactgggatcagatgctcttattaatgacattttagctgagctggtcaga
cttgggaacaaaagcgaatctgagccacagcctcctagtgtcggtaacgcaggtacccta
gtgtccaggggccagtgtgtaaaagaagtcacaagcccagagctgtccttagaagatgaa
gttgtggatgattctgacaatttgagacctatagtcatcgatggaagtaacgtggccatg
agtcatggtaacaaggaagtgttctcttgtcgtgggattcagttagctgcagaatatttc
ctggaaaaaggacacaaagatatcacagtgtttgttcctgcttggaggaaagaacagtcc
aggccggatgcacccattaaagatcaagaactacttcgaaaacttgagaaagagaaaatt
ctggtcttcacaccatcccgacgagtgcaggggaggagagtggtgtgttatgatgatcga
ttcatagtgaaattggcctttgactctgatggcattattgtgtcaaatgacaactataga
gatctacagaatgagaaaccagagtggaagaaatttatagaagaacgtcttctaatgtat
tccttcgtgaatgacaagttcatgccacctgatgatcctttaggacgtcatggtcccagt
ctggataacttcctgcgaaagcgtcccgttattccagagcacaagaaacagccttgtcct
tatgggaaaaagtgcacttatggacacaagtgtaaatactatcatccagagcgtgtgaac
cagccacagagatcagttgctgatgagcttcgtgccagtgctaagttgtctgctgtgaaa
actatgagtgaaggagccctggcaaaatgtggcattgccatatcgggtgtgaaaggagaa
aacatttctgagattaagcgtgtcgctccaaagcgccaatctgaccccagcatacgatct
gtagtttgtgagccagaggaacgattgacaccatctcgcagacttgagactaactctgtg
ccttctttggtcactgcatcgagtgtacctacatttcaacagaataaaaatcatgcagcc
agtgccatgagtacccgatctgcaagcagtccagtgccatgttccaaacagttcactcac
cagaaatcctcacaagagcatttatccactttaaattatccacctattcttgtaaccaat
agccatggaaactctgtgagttatacagaacagtatccaaaatatgattcaactttggat
actggctactactctatgataaatgacttctcaaatttaagtatcagcagtatgcggaac
cacgatggctattatggattggaatcggatcatggtttgtatccaagaaacactagtcct
cacacagaaacctgcattacaagtaatgattcctattcttcatacagtgacctggcgtac
cttggcactgtggaaccaggtccagaagataatgtgaaaacccatcagccacagtcacag
aataggctgcaacctttcattcatggctaccacgaacctataacaagagtgcagagctat
ggctcagaggagtcaaaacaaccccagcgtaaacagtccatctcccatttagttcctcat
atccagcattctgctgctggagctcgttccagctgtcctggggactatcctgttcctcaa
aacattcatccatctgctaataatcagccaggacgggctctggtaatgactaggctggac
agcatttctgattcacgactatatgaaagtaatccaatgagacaacgaagacctccactc
tgcagagagcagcataccagctgggatcacctaccatgtgtcacagattcctatagatac
ccttcataccctttgactaataatctcatgcaacccagttatgaacctggtatgtttaga
agtatgccggaaaagatagagcagatctggaggtccccctggcagggaatgcccaatgag
caacaggaccatctggcaattcgggaacatcagtatcaaacatatcgaaacctctgtaac
atctttccagcagacatagttcatgcagtaatggaaaagaatccccatgtaactgacccc
cagcatcttgctgctgagatcgttgctaaacaactacgttctgggcggtaa
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