Chiloscyllium plagiosum (whitespotted bambooshark): 122557352
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Entry
122557352 CDS
T08871
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122557352 (tmc1)
03037 Cilium and associated proteins [BR:
cpla03037
]
122557352 (tmc1)
Transporters [BR:
cpla02000
]
Other transporters
Pores ion channels [TC:
1
]
122557352 (tmc1)
Cilium and associated proteins [BR:
cpla03037
]
Other cilia and associated proteins
Stereociliary proteins
122557352 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
DUF4199
Motif
Other DBs
NCBI-GeneID:
122557352
NCBI-ProteinID:
XP_043560920
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All DBs
Position
2:73534948..73622948
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AA seq
921 aa
AA seq
DB search
MPRHEKLIVKSSDVSIEVDNDESDDEEQGEETDDYSSEVEPQCTKKSAGRNRNGKRKIEQ
ESEEQSDDSEEEEEEQSRKKNVQNRNKLTNRNNLNEAEEQATKSRKNKRNAKSKKKDSHS
DDHDDEALGKKKKGKSDKKQMDSESEEEDTKKRGKRKDKNGKKAVNKGKINKNKYSSSSE
EESREEEEVITEEDMAKLKDQVEEKKKLIATLRNKPSPMKQKLQLLKEAQEFVEKFEGAL
GKGKGKKFYAYKVMMTKKWMKFQRDFENFRTACIPWEMKIKEIESHFGSSVASYFIFLRW
MYGINMVLFGLTFGLVMIPEALMGKPYGSMPRKTVPMSEQDSAMNFATLWDFGGYAQYSV
LFYGYYNNQRTIGWLKFRLPLGYFLVGVGTIGYSFMVVIRTMASNANEEGGGDDTSFNFS
WKMFTSWDYLIGNAETADNKFASITTSFKESILEEQENRKEGNIHLTRFLRVLANFLVLL
TLAGSGYLIFFVVRRSQKFAQEGLDDYGWWERNEVNMVMSLLGMFCPMLFDIISPLENYH
PRIALQWQLGRIFALFLGNLYTFIIALLDEINLKLEEEKIVKYNITIWEKNLYEFVRLTV
SDTLTTVITILIGDFLRAVFVRFVNYCWCWDLEYGFPSYAEFDISGNVLGLIFNQGMIWM
GAFYAPCLPAINVLRLLASMYLQCWAVMCTNVPHERVFKASRSNNFYMAMLLIILFLSTL
PAVYTIVSIPPSFDCGPFSGKDRMFDVIQETLDNDFPAWFGKVFTAATNPGLILSFILLM
GLAIYYLQATSESYKAANLELKKKLQNQSDENKKRNKKNAKAAANQMEELQNSMQKVNER
ATGGDVDKKANGVNSSNQPSAQGAYPPNGRGMRLAPPPRVAVTRPPRPRGPGQLPGQPRY
PGPQQYHGAHPRMPRGGAAYR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccacggcatgaaaagctgatcgtgaaatcaagtgatgtgagcattgaggtggataat
gatgaaagtgatgatgaggaacagggtgaagaaacagatgattacagctcagaggtggaa
ccacaatgcacaaagaagtcagcaggaaggaacagaaatggaaagagaaaaattgaacaa
gaatcagaggaacaatctgatgactcagaggaggaagaagaagagcaaagtagaaagaaa
aatgtgcaaaatagaaacaaattaactaataggaacaacttaaatgaagcagaggaacaa
gcaactaaaagtaggaagaacaagagaaatgcaaaatctaagaaaaaagattctcatagt
gatgatcatgatgatgaggcactgggcaagaaaaagaaaggaaaaagtgacaaaaagcaa
atggacagtgagagtgaagaggaggataccaagaaaaggggcaagagaaaagataagaat
ggcaaaaaagctgtaaataaaggcaaaatcaataaaaataaatatagttcaagctcagaa
gaagaatctagggaagaagaagaagttattacggaagaagatatggccaagttgaaggat
caagttgaagaaaaaaagaaattaattgcaactttgcgaaacaaaccctcacctatgaaa
cagaaattacaattactgaaagaagctcaggaatttgtggagaaatttgaaggggcactt
gggaaaggaaaaggcaaaaagttttatgcctataaagtgatgatgaccaaaaaatggatg
aaatttcagcgtgactttgagaacttcagaactgcttgtattccatgggaaatgaaaata
aaagagattgaaagtcactttggttcatcagttgcttcatatttcatcttcttgagatgg
atgtatggaatcaatatggttctgttcggattgacctttggtttggtaatgatccctgag
gctctgatgggaaagccatatggcagcatgccaagaaaaacagttccaatgagtgagcaa
gactcagccatgaattttgcgacattgtgggattttgggggctatgcacaatattctgtc
cttttctatggttactataataatcagcggacaattggatggctgaaattcaggctacct
ttgggttacttcctggtgggagtcggtacaatcggatacagcttcatggtagtgattagg
acaatggcaagcaatgcaaatgaagaaggtggcggagatgacacaagttttaatttcagt
tggaagatgttcacaagctgggactacttgattggcaatgcagaaactgcagacaataaa
tttgcttcaatcactaccagttttaaggaatctatacttgaagaacaagagaaccggaag
gaaggaaatatccatttaaccagattcttacgtgttcttgccaacttcttggtactcctc
actcttgctggaagtggctatcttattttcttcgttgtcagaagatctcaaaaatttgca
caggagggactggatgactatggatggtgggaaagaaatgaagtaaatatggtcatgtca
ttgctgggcatgttttgtccgatgttattcgacatcattagtcctttagagaactaccat
ccacgaattgcactccagtggcaattgggccgcatttttgctttgtttcttggtaacctt
tacacatttattatcgcattattggatgaaattaaccttaagcttgaagaggaaaagatt
gttaaatacaatattactatctgggagaagaatctttatgagtttgtacggctcactgtt
tctgatacattgactacagtcataactatactgattggagatttccttcgtgctgttttt
gtcagatttgttaattactgctggtgttgggaccttgaatatggatttccatcctatgca
gaatttgatatcagtgggaatgttctgggtctgatcttcaatcaaggaatgatatggatg
ggtgccttttacgctccatgccttccagctatcaatgtcctacgtctcctggcttccatg
tatctacagtgctgggccgtcatgtgcaccaatgttccacatgaacgtgtgttcaaggct
tcaagatcaaataacttctacatggccatgctgctgatcatcttgttcctgtcaacattg
cctgcagtttataccattgtttcaataccaccatcctttgattgtgggccatttagtggg
aaagatagaatgtttgatgttattcaagaaacactggacaatgactttccagcatggttt
gggaaagttttcactgctgcaacaaatcctggtttgattctgtctttcattttacttatg
ggtttggctatctattaccttcaggcaacctctgaatcatataaggctgcaaacttggaa
ttaaagaagaaactacaaaatcaaagtgatgaaaataaaaagagaaacaaaaagaatgcc
aaagctgcagcaaatcagatggaagaactacagaattccatgcagaaagtcaatgaaaga
gcaacaggtggtgatgtggataaaaaagcaaatggagttaattcttctaatcagccttct
gctcagggtgcctatccacccaatggaagaggaatgagacttgctcctccaccacgtgta
gctgtgactcgaccaccaaggccaagaggacctggccagttgccaggacaacctcgttac
ccaggaccacagcagtaccatggagctcacccaaggatgcccagaggtggtgctgcttat
agataa
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