Chiloscyllium plagiosum (whitespotted bambooshark): 122557376
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Entry
122557376 CDS
T08871
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04060
Cytokine-cytokine receptor interaction
cpla04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122557376
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122557376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cpla04052
]
122557376
04090 CD molecules [BR:
cpla04090
]
122557376
Cytokines and neuropeptides [BR:
cpla04052
]
Cytokines
Tumor necrosis fators
122557376
CD molecules [BR:
cpla04090
]
Proteins
122557376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Col_cuticle_N
Fez1
DUF6377
DUF1664
DUF4446
PspA_IM30
FapA
Goodbye
Baculo_PEP_C
FlaC_arch
DUF2203
ATG16
Sec10_N
Motif
Other DBs
NCBI-GeneID:
122557376
NCBI-ProteinID:
XP_043560955
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All DBs
Position
15:60984923..61047549
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AA seq
272 aa
AA seq
DB search
MQAKCWIKLPDTKTKSTSRGLIGTVIVLFFAVLCCLSLLVILLQQIRDLRSELAKVHKQL
HVFSKRTSVNLEDDSVEHEQEVEDLSENLKNSYNAKSQIKEQLTGLNEKIYDLRSISRKR
RDVRSCGKQLSFLQLIPNARESIILQEDSTFIPWIVASRKGEALKKISNKIVVRENGYYT
VYSQVLYYDNCMAMGHVVQRRKANVVGNERPVLTLFRCIQNMPNSSPSNTCFTAGIVNLD
QGDELELLLPSRPNANISMEKDSTFFGAIQLL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaaatgttggattaaattaccagacacaaagactaaatctacctcgagaggt
ctgattggaactgttatcgttctcttcttcgctgtgttatgctgtttgtcactgctggtt
attttactgcagcaaataagagacctacggagtgaactggcaaaagtccacaaacaactt
catgtttttagcaagaggacaagcgtaaatcttgaggatgattcagtggaacatgaacaa
gaagtggaagatctgtccgaaaatttgaaaaatagctataatgccaaatcccaaataaaa
gagcagttaactggactgaatgagaagatctatgatctcaggagcatttcaaggaaaagg
agggatgtaagatcctgtggaaaacaactatcattcctccagctgattcctaatgctagg
gaaagcataattctgcaagaagattcgacctttattccttggattgtggcttccaggaag
ggtgaggcactgaagaaaatttccaataaaatagttgtgagagaaaatggctattacact
gtgtacagtcaggttctgtactatgataactgcatggccatgggtcatgtagtccagaga
aggaaggctaatgtggttgggaatgaacgacctgtattgacgctatttcgctgcattcaa
aacatgccaaacagctcacccagtaatacctgtttcaccgctggaattgtgaatcttgac
caaggggatgagctagaacttctgttaccatcccgacccaatgccaacatctccatggag
aaagattcaacattttttggtgccattcaattattatga
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integrated database retrieval system
