KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122557382
Entry
122557382         CDS       T08871                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04382  Cornified envelope formation
cpla04510  Focal adhesion
cpla04512  ECM-receptor interaction
cpla04518  Integrin signaling
cpla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122557382 (col4a5)
   04518 Integrin signaling
    122557382 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122557382 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122557382 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    122557382 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpla04147]
    122557382 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:cpla00536]
    122557382 (col4a5)
Exosome [BR:cpla04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   122557382 (col4a5)
Glycosaminoglycan binding proteins [BR:cpla00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   122557382 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 122557382
NCBI-ProteinID: XP_043560966
LinkDB
Position
15:complement(61328252..61579330)
AA seq 1695 aa
MRLEYSSFDRLSVRIFLLLSALTLLVENSEAAACHGCAPASGCDCSGVKGEKGARGLPGL
EGHMGLPGFPGPEGPPGPRGLKGDTGPPGFSGPKGIRGPPGLPGFPGTPGVPGLPGQDGP
PGPPGIPGCNGTKGERGFPGGPGHPGAQGRLGPPGIPGQKGEPGEVLSSQAFGYKGDPGM
PGVPGLPGPQGPRGGPGNSGPLGPPGQPGFPGAPGPPGPKGNMGLNFQGPKGEKGDPGLQ
GPPGPPGQLEQLNSPGVDFQKGEKGEIGPPGLRGERGNPGPPGPPGFSGKGEKGEPGDPG
KRGKPGKDGEPGSPGFDGLPGNAGQPGIAGRDGHKGQKGERGFPGPPGITFPRPGVTIGQ
KGDPGFPGASGEKGDRGPPGLPGIPGQPGPPGQPSIGSPGTPGFPGERGQKGEEGVPGFA
LPGPQGAIGRPGPSGPPGPPGLPGHLGPGIGLQCQPGQPGPPGLPGAPGFAGERGLKGDK
GDTCFNCFGTGNGATGLPGPPGPHGLPGQPGLPGMKGDRGLPGPIGTLGPPGLPGPPGFP
GARGPKGDRGDGFGFPGPKGDRGNPGFPGSPGLPGLDGTPGRNGLPGSPGPKGVPGGLAF
KGAIGLPGDPGPIGFPGERGPPGPPGFGPPGYPGEKGAQGVSGRPGAPGAPGAKGDSGQT
VSEPGPRGPPGIPGEPGLAGRPGDSGQPGQPGLPGLQGPKGDRGMPGIGFPGPAGPKGLP
GLPGSPGAPGGPGRPGRDGTPGQPGIPGSKGDPGFGLPGPPGPPGPQGINGLPGHKGDPG
TPGLPGQAGRPGIDGTIGSKGDPGFTGPPGPPGPVGSPGLGGRGVPGPQGPPGLPGQPGQ
PGLPGRAGEKGDPGPPGLDIPGPSGEKGNTGFPGSPGPVGPPGTPGIPARDGLPGPPGPK
GDMGVMGTPGPPGSPGPPGAPGFQGAKGNDGIPGRPGNPGGSGYKGDKGDIGLPGAPGTI
EPGQIFAGQKGEPGIPGSPGLPGAKGFTGLPGDPGAPGQDGLPGLPGGPGMKGDPGYPGQ
PGSPGLPGPKGSMGEMGLPGPLGGKGSPGNPGRPGQPGTPGHPGLKGDKGDSGLPDLGSP
GPPGQKGEPGSPGFPGNPGSKGVPGSPGLPGLPGAPGPKGDFGQPGFPGTPGIPGPKGID
GFPGPPGLTGPPGSPGEPGPLGIPGIPGEKGQPGRDGIPGRAGPKGDSGPPGLGRPGPPG
PSGIPGPKGDPGVPGNPGGPGAPGLKGDPGFPGFTGQQGPPGPPGPPGQSFEGPKGSPGT
PGQPGRPGPPGPQGPQGPVGPRGPPGFGGIKGEKGNPGLPGSPGFPGIKGDIGSPGLPGG
PGQPGFTGQKGDPGPAGLPGFPGMKGSPGSLGGKGLPGDRGPPGPRGAPGQPGPPVPARI
VKGERGYPGPPGLPGHKGLPGPTGPPGSPGPAGSPGDPGQDGIPGFNGPSGQKGDRGFPG
GPGDRGLTGPPGPDGTPGVPGLPGSASVAHGFLITRHSQSTEVPRCPPGTLIIYDGYSLL
YVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMPMSMA
PVNGENIRPFISRCTVCEAPALVIAVHSQTIQIPPCPEGWNSLWIGYSFMMHTSAGAEGS
GQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVETTEMFSKPQSETLKAGE
LRTRVSRCQVCMKRT
NT seq 5088 nt   +upstreamnt  +downstreamnt
atgaggcttgagtattcctccttcgaccgacttagcgttcggatatttttgctgctatcg
gcgctaacacttttggtggagaactccgaagcagcggcttgtcatgggtgtgcgccagcc
tcaggttgcgactgcagtggagtgaaaggtgaaaagggtgcgaggggtctgccaggactg
gagggccacatgggtttacctggtttcccagggccagaggggccaccgggaccaagaggc
cttaagggtgacactggaccacctgggttttcaggacctaaaggaataagaggacctcca
ggtcttccaggctttcccggaacccctggtgttccagggttaccaggtcaggatggtcct
ccgggtcctccaggcatcccaggttgtaatggaacgaagggcgaacgaggatttccaggt
ggtcctggccatcctggggcacagggtcgtctaggaccccctgggattccaggccaaaag
ggtgaaccaggtgaggtgctgtcatcacaggcgtttgggtacaaaggagatccaggaatg
cccggtgtccctggtttaccaggtccccaggggccacggggaggaccaggtaattctggt
ccactcggtccaccaggtcagccggggtttccaggtgctcccggtccacctggtccaaag
ggaaacatgggcttgaatttccaaggacccaaaggggagaagggtgatccaggtcttcaa
ggtcccccaggtcccccaggacagttggaacagctgaattctcctggtgttgatttccag
aaaggagaaaagggtgagataggaccacctggtttgcgaggggagaggggcaaccccggc
cctcctggcccccctggctttagcggcaaaggcgagaagggtgagcctggagatccagga
aagagaggtaaaccaggaaaggacggagaaccaggtagccctggatttgatggtcttcca
ggaaatgcaggtcaaccaggaattgcaggtagagatggacacaagggtcagaaaggagaa
cgtggtttccctggtcctccaggcattacatttccacgaccgggtgttacaattggacaa
aaaggtgacccaggttttccaggtgcttctggagaaaaaggcgatcgaggtcccccaggg
cttccagggataccaggacaaccaggtcctccaggtcagcccagtataggatcaccaggc
accccgggtttcccaggtgaaagaggtcagaaaggggaagaaggcgttcctggatttgca
ctgcccggtccacaaggagcaattggtcgtccaggtcccagtggtcctccaggccctcct
ggtctaccagggcatttaggtccaggcattgggttgcaatgtcagccagggcagccagga
ccaccaggtttaccaggagcacctggctttgcaggagagagaggactgaaaggggataag
ggagacacatgctttaactgttttggtactggcaatggagctactggtctaccaggacct
ccaggaccacatggacttccaggtcaaccaggattgccaggaatgaaaggagatcgtggg
ctacctggtccaattggaactttgggaccgcctggtttgccaggccctcctggttttcca
ggagcccgtggcccaaaaggtgaccgtggagacggctttggctttccaggcccaaaaggt
gatcgagggaatcctggtttcccaggatccccaggacttccaggattagatggcacccca
ggaagaaacggcctgccaggttcacctggtcctaaaggtgtacctggtggcttggccttc
aaaggagcaatcggactccctggagatccaggcccaattggatttccaggagagagaggt
cccccaggcccaccaggatttggtccaccaggctatccaggggagaaaggtgctcaggga
gtatcaggtcgccctggagcccctggagctccaggtgctaaaggtgattctggtcaaaca
gtctctgagcctggtccaagaggtccaccagggataccaggtgaacctggattggcaggt
cgcccaggtgactcaggccaaccagggcaaccaggtttaccaggactccagggaccaaaa
ggggataggggaatgccaggcattggattccctggtccagcaggtccaaaaggtttgcca
ggattaccaggttcaccaggtgctccaggaggtccgggaagaccaggtcgtgatgggact
ccaggtcaaccaggaatcccaggatcaaagggagatcctggctttgggcttcctggacca
ccaggtccacctggtcctcaagggatcaatgggctgccaggtcataaaggtgatccagga
acccctggattaccaggccaagcagggcgaccaggaatagatggcacaattggatcaaaa
ggtgatccaggtttcactggccctccaggtcctcctggtccagtcggctcccctggatta
ggtgggcgaggtgtcccgggtccacaaggcccacctgggcttccaggtcaaccaggtcaa
ccagggttgccaggtcgcgctggtgaaaagggagatcctggtcctccaggattagatatc
cctggcccttctggtgagaagggaaacacaggattcccaggcagtccaggtccagttggc
cctccaggaacacctggaataccagcaagggatgggttaccaggtccaccaggtcctaag
ggtgatatgggtgtaatgggaacgccaggccctccgggttctcctggtcctccaggtgct
ccaggttttcaaggagcaaaaggtaatgacggcatcccaggtaggcccggaaacccaggc
gggtctggctataaaggtgacaaaggtgacattggccttccaggtgccccaggaacaatt
gagccaggtcagatctttgcaggacagaaaggagagccgggtatcccaggttcaccaggt
cttccaggcgcaaaaggtttcacaggattacctggtgacccaggagcgccaggtcaagat
ggtttaccaggattgccaggaggtccagggatgaaaggagatccagggtacccaggacaa
ccaggatctccaggattacccggaccaaaaggatcaatgggtgaaatgggtcttccaggt
ccactaggtggtaaaggttctccgggaaatcctggtcgtccaggtcagccaggtactcca
ggtcatccagggttaaagggtgataaaggtgactcaggtttaccagatctagggtctcca
ggcccccctggtcaaaagggtgaaccaggttctcctggtttccctggtaaccctggaagt
aagggtgtaccaggtagccctggtcttcctggtttgcctggtgcgcctggtcctaaaggt
gattttggtcaaccaggattcccaggtacacctggaattcctggtcccaagggaattgat
ggcttcccaggtccccctggccttactggaccacctggttcaccaggtgaaccaggtcct
cttggaattccagggattccaggagagaaaggacaaccaggccgtgatggtattccaggc
cgagctggtccaaagggagattcaggtcctccaggtctaggacgtccaggaccccctggt
ccttcaggaattccaggaccaaaaggagatccaggagttccaggtaacccagggggtcct
ggagctccaggtcttaaaggtgatcctggattcccaggattcacaggtcagcaaggccca
ccaggaccccctggaccaccagggcaatcatttgagggcccaaaaggatcaccagggact
ccagggcagccaggaagaccaggtcctccaggtccacaaggcccacagggtccagtgggt
ccacgaggcccaccaggatttgggggtatcaaaggagaaaaaggcaatcctggtcttcca
ggatcaccagggttccctggaataaaaggagacattggatcaccaggactgccaggtggc
ccaggacaaccaggcttcacaggacaaaaaggcgacccaggtccagcaggcctgccaggc
tttccaggaatgaaaggatctcctgggtctcttggtggtaagggtttgccaggtgatagg
ggcccacctggccctcgaggtgcacctggtcaacctggtccaccagtaccagctcgaatt
gtcaaaggagaacggggttacccaggaccaccaggtctgcctggccataaaggattacct
ggtccgactggtccaccagggtctccaggtccagcaggatcccctggtgacccaggtcaa
gatggtattcctgggtttaatggaccaagtggacaaaagggagatagaggctttccaggg
ggcccaggtgacagaggacttacaggcccaccaggtccagatggtacccctggagtgcca
gggcttcctggatctgcttctgtagctcacggattcttgattacccgacacagtcagtca
acagaagtgccacgttgtcctcctggaacattaatcatctacgatggatactctctgctt
tatgtacaagggaatgagagagcacatggtcaagatttgggaactgctgggagctgtctg
cggcgtttcagtacaatgccatttatgttctgtaacatcaacaacgtctgtaactttgcc
tcaaggaatgactactcctactggctctcaacacctcagccaatgccaatgagcatggcc
ccagtaaatggggagaacatccgacccttcattagcaggtgcactgtttgtgaagcccca
gccttagtaatagcagttcatagtcagactattcagatcccaccgtgtccagagggatgg
aactcactgtggattggatactccttcatgatgcacaccagtgctggtgctgaaggatca
ggccaagccttagcttctcctggttcctgcctggaggaattccgatctgcaccattcatc
gaatgccatggtcgaggcacttgcaactattatgccaactcgtacagtttctggctagcc
actgtcgaaacaacggagatgttcagtaaaccgcagtcggagactctaaaagctggtgaa
ctccgaacacgtgtgagccgctgtcaagtatgtatgaaaaggacgtaa

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