Chiloscyllium plagiosum (whitespotted bambooshark): 122557435
Help
Entry
122557435 CDS
T08871
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122557435 (aff2)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122557435 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
122557435
NCBI-ProteinID:
XP_043561106
LinkDB
All DBs
Position
15:complement(71972159..72498230)
Genome browser
AA seq
1269 aa
AA seq
DB search
MDLFEFDFFRDWELEQSCHYEQDRNALRRKEWERRNQEVHQDEDLFAASFNLFSEPYKSC
MPSNFFQTSKGDALSNRVQSTLGNYDEMKDLLTNRSNQSHLVGIPKSLIPQTPVEKMEQS
FFTEPRAKIASSHQSSSHSSSCMPPPSSSLSLSSTLLHGHQSSKKSRMDWPRSGHGSGSG
HSVQSIGQSSNQQSRGKHEQAQDRYGDLYSNQTEQHKNDHQAIGDDCVKSQSPSPSTTSR
SKRHSHSKSSSGDHAYKESCHGKSPVDSDTALHSAGSPAPSTSLIPCSSAISAQNFPPGL
YSKSSMLQQKPTAYVRPMDGQDQVPIESPELKPLMEMDDAFSSQLFGSLLDGKPSTASTK
CKLPKLTIPQPGEVSLSNETSCVEEILREMTHSWPPPLTAIHTPSKAEPTKFPIPSKDSQ
HLTSGYNGQKRCDVQGKPPTKSAPQKSMLEDDLKLSSDEDDGEQVEKTKIRSIAVNSITL
QNSHVSGSGHSSGGCSSSSESGSSSESDSDSESSSSDSECNEHSRSATPEPEPPSTNKWQ
LDKWLKVHSHNKTIVNNQTDCDGLGDSQPQSNQQNDKEIKGKQTISLPQPDSKDRVLLSP
VREKAKPRTAQKTPEGKSVKQKSPVPNEPAPPRKTTGKKQPRRVECTPSLEEQSWAKPNN
PSSTPKERESRGASAEQPKAKPRAAISKTGPRKEPRTSTAPAVDRKKHRVPGKIVPKSRE
FVETDSSDSHTDQEEHMPVKIPVGSTITTNSLQPKDCGSVSNCASSISTDAPITDLEEPS
FSPLPLPQNELLSPLRDYEEIKSLWVKFDLSLLSRIPGQTPAEITPVKIEVRESNSKCNY
QSPTAMTDKNTIKTKRKHKVEHPEVLCDNKKQRVEREITAPTLVPVSCPVASSHKLLSSK
ELSKQLTKRERKFPPPLSPLPDEPEPKRRNSESNPLSQESNSNSVSASASQSSAQYKHRK
ADNKPSSHVKDPIEAESHLNPSNIHHENGQSQTDPWTLVSNGHSEPRRPKLTFDDTSHNA
DYYMQEAKKLKHRADALLDKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSETVE
LIRYAMRLKNFTGSMATLADKKLAVLCYRCLSLLYLRMFRLKKDHAMKYSRSLMEYFKSS
SKASQAPSPWGTNGKTTGTASPLSPSPSPVSSVGSHGSSTSTSGSSPSATISIPQRIHHM
AASHVNITNNILRSYEHWDTADKLGRENKEFFHELDTLMGPLTQHSNMTTLVRYTRQGLH
WLRVEAHLL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaccttttcgagtttgacttctttagagactgggaattggagcaatcgtgtcactac
gagcaggatcggaatgcactgcggaggaaggaatgggaaagacgcaaccaggaagtccat
caagatgaggacctgtttgctgcaagctttaatctattcagtgaaccctacaagtcttgt
atgccgtctaatttctttcagaccagcaagggggatgctctttccaatcgtgtgcagagt
acattagggaactatgatgaaatgaaggacctgttaacgaatcgctcgaaccagagtcac
ctcgtagggatccccaagtcgttgattccacagacacctgtcgagaaaatggagcagagt
ttcttcaccgaacccagagccaaaatagcctcatcccaccaaagcagtagtcattcctca
tcatgtatgcctccaccttcttcctctttgtcattgagttcaacattgctgcacgggcac
cagagcagcaagaaatcccggatggactggcctcgcagtggccatggttctgggagtggg
cacagcgtgcaatccataggccagtccagcaatcagcagagccgaggaaagcatgaacaa
gcccaggaccggtacggtgacctgtatagcaatcagactgagcagcacaaaaatgatcat
caggctattggtgatgattgcgttaagtcacagtcacctagtcccagtaccacttcccgt
tccaaaagacacagccattccaaatccagcagtggggatcatgcctataaagaaagctgc
catggaaagtctcccgttgacagtgacactgctctccattctgcgggatctccagctcct
tcaacatccctgataccctgcagcagtgcaatctccgctcagaatttccctcctggactg
tattctaagtctagcatgctccaacagaagcccactgcttatgtgagaccaatggatggg
caagaccaagttcctatcgagtcgcccgaactaaagccactcatggagatggacgatgct
tttagcagccagctgtttggcagccttctagatggaaagcccagcacagcaagtactaag
tgcaagttaccaaagctgacaatccctcaacctggtgaggtcagcctttccaacgagacc
agctgcgtggaagaaatattacgggagatgacacattcctggcctcctcctctaacagcc
atacacacgccttccaaggctgaaccaaccaagttcccaattccaagcaaggactctcag
catctaacctctgggtacaatggacaaaagcgctgtgatgttcaaggaaaacctccaaca
aagtctgcaccacagaaatcgatgctcgaagatgatctgaagctcagcagtgatgaggat
gatggtgaacaggtggagaaaaccaagattcgatccatcgctgtaaacagcatcactttg
cagaattcccacgtttcaggctccggccattccagtggtggatgcagcagctccagtgag
tctgggagcagctcggaatctgactcagacagcgaaagcagctccagtgacagtgaatgc
aacgagcactcgcgtagtgccacaccagagcccgaaccaccatcaaccaataaatggcaa
ttggataagtggctcaaagtccactcacacaacaagaccatcgtcaacaaccaaaccgat
tgtgatggacttggtgattctcaacctcagagcaatcaacagaatgacaaagagatcaaa
gggaagcagaccatatcactgcctcagccagattccaaagatagggtcttactcagtccc
gtcagggagaaagctaaaccaaggactgcacagaaaaccccggaagggaaaagtgtgaag
caaaagtcccccgtacccaatgagccagctcctccaaggaagaccacgggtaagaaacag
cccaggagagtggaatgcactcccagcttggaggaacagagctgggccaagccaaataac
cccagcagcactcccaaagaaagagagagccgaggagcttcagccgaacaacccaaagca
aagccgagagcagccattagcaaaacgggacccaggaaagagccaagaaccagcacagcg
cctgctgttgacaggaaaaagcacagagtgcctggtaagattgtgcctaaatcgagagag
tttgtagagacagactcgtctgattcccacacagatcaagaagaacacatgccagtgaaa
atcccagtgggttccaccatcacgacaaactcactgcaacctaaggattgtgggagcgtc
agtaactgtgcgagtagcatttccaccgacgcgcctattactgacttagaggaaccctca
ttctcacctcttccactaccgcaaaatgaacttctttcccccctgagagattatgaggaa
attaaatcgctttgggtgaaatttgatctcagtctgttgtccaggattcctggacaaacc
ccagcagagataacgccggtgaagatagaggtcagagagtccaacagtaaatgcaactat
cagtcgcctaccgcaatgacggacaaaaacacaatcaaaacaaaacggaaacacaaggtg
gaacatccagaagttctctgcgataacaagaaacagcgtgtggaaagggagataactgct
ccaacacttgtacctgtcagctgtccagttgcctccagtcacaagcttctgagcagcaaa
gagctatcgaagcagttaacaaagagggagaggaagttcccacctccgctgtcacccttg
ccagatgagcctgaacccaagcgacggaacagtgagagtaaccccctgagccaggaaagc
aacagcaattcggtatcagccagtgcctcgcagtcatccgcacaatacaagcaccggaaa
gctgacaataaaccctcttcccatgtgaaagatcccattgaggctgaatcacatctgaac
ccgtccaatattcaccatgaaaatggccagtcacaaacagatccctggacgttagtatcc
aatggtcattcagagccaagaagaccgaaattaacttttgatgatacgtcgcataatgct
gattactacatgcaagaggccaagaagctgaaacacagagctgatgcactgcttgataag
tttggaaaagcagttaattatgcagatgcagcactatcattcattgaatgtggaaatgcc
atggagcgtgatccattagaagcgaaatccccatacaccatgtattctgagaccgtggaa
ctcatcaggtacgccatgaggttaaagaatttcacaggttctatggccacgttagctgat
aagaaactggcagtcttatgttaccgatgcttgtcacttctctatttgcgaatgttcaga
cttaagaaagaccatgccatgaagtattctcgatccttgatggaatattttaagagttcc
tcaaaagcctcacaagctccttcgccttggggaacaaatggaaaaaccacaggaacagcc
tcccctttatctcccagcccatctcccgtcagctcagtcgggtctcacgggagtagcaca
agcacctctggctcatcaccctcagcgaccatcagcattccacagcgtatccaccacatg
gctgccagtcacgtcaacatcaccaacaacatcctcaggagttatgaacactgggacacg
gctgacaagttgggcagagagaacaaagagttttttcatgagctggacacactgatggga
ccgttaacacagcacagcaacatgactaccttggttcggtacactcgacagggactgcat
tggctgagggtcgaagctcatttattatag
DBGET
integrated database retrieval system
