Chiloscyllium plagiosum (whitespotted bambooshark): 122557626
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Entry
122557626 CDS
T08871
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122557626 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpla02000
]
122557626 (slc6a5)
Transporters [BR:
cpla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122557626 (slc6a5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
122557626
NCBI-ProteinID:
XP_043561329
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Position
16:5902672..5987061
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AA seq
782 aa
AA seq
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MDCTEQKGMTKPTVSVAESSSPGQTSRIDAVGVTRTSLETEAAGVFQVAVPGSQTTEGKA
VSLKEAQSNGSDGGTVGICKNESTQPNSVVHQDSIEMLPRKDTAVESNERTNTVYCKIAE
VEVSYGTGIPTIQQNNTKSSWVTKSQSTVLLGTDGNTAVFPGTLSGEDEGDENKARGNWS
RKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLAFAGVPIFFLETALGQFA
SQGPISVWKAIPALQGCGLAMLIISVLIAVYYNIIICYTLFYLFASCIPVLPWASCENRW
NTANCRDKHKLLLDSCIIGDMNSVQIKNSTFCLSAFSNVTMVNYTQPINKTFVSGSEEYF
KYFVLKISDGIEYPGEIRWELAMTLLLAWIIVYLSLAKGIKSSGKVVYFTATFPYVVLVI
LLIRGITLPGAGDGIWYFITPNWDKLKDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFH
NNIYRDTLLVTCANSATSVFAGFVIFSVIGFMAKELKVPITEVADEGPGIAFVVYPEALT
RLPLSPFWAIIFFLMLLTLGLDTMFATLETIVTSVVDEFPGYLRPKKPLFTLVCCVIFFF
MGIPMVTQGGIYMLQLVDTYAASYSLVIIAIFELVGVSYIYGLKRFCEDIEMMIGFQPSY
FWRICWAFVTPTILTFILCFSFYQWEPMTYENYKYPAWSMVMGWLMLACSVIWIPIMFVI
KMHLAPGSFIERLKLVCSPQPDWGPFLTQHRAERYKTMMDPLGTSSLGLKLPPKDMELGP
QF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggattgcacagagcagaaaggcatgactaaaccaacagtcagcgttgccgagagttcc
tccccgggacagaccagcagaatagacgccgttggagtaaccagaactagcctggaaact
gaagccgcaggggtgttccaggtcgcggttcccggctcccaaaccaccgaaggcaaagct
gtctccctcaaagaagcccagtctaatggctctgacgggggcacggttgggatctgtaag
aatgagtccacccagcccaattccgtcgtccatcaggattccatcgaaatgttaccccgt
aaggatactgctgtcgagagcaatgagcgcaccaacacggtttactgtaagatcgccgag
gtggaggttagctatggcactggcatccccacaatccaacaaaacaataccaagagcagc
tgggtcacaaagagccagagcacggtgttactggggacagatggaaacaccgctgtattc
cccggcactctcagcggggaagatgaaggagatgagaataaagccagagggaactggtcg
aggaagctggacttcattttgtccatggtcggctatgcggtaggactggggaatgtctgg
cgttttccctatctcgcattccagaacggcggaggtgcatttctgattccctacctgatg
atgttggcttttgctggagttcccattttctttctggaaacagcacttggccaatttgcc
agtcaaggccctatatcagtgtggaaagctattcctgccttacaaggatgtggactcgct
atgttaatcatctcggttctgattgctgtgtactacaacatcatcatatgctacactctc
ttctacctttttgcatcatgcatacccgtccttccctgggcatcctgtgaaaatagatgg
aacactgcaaactgtagagacaagcacaagctgttattggattcctgcataattggagat
atgaacagtgtgcagattaaaaactcgacattttgcctttctgctttttccaatgtcacc
atggtgaattacacccagccaataaacaaaacctttgtcagcggcagtgaagaatacttc
aagtactttgtgttaaagatttctgatgggattgaataccctggggaaataagatgggag
ctagcaatgactctgttattggcctggataattgtttatctatccctggctaaaggaata
aaatcatcaggaaaggttgtctacttcacagccaccttcccctatgttgtccttgtcatc
cttctaatccgagggattactttgccgggtgctggagatggaatctggtacttcattacg
cccaattgggataagcttaaggatgctaaggtgtggaaagacgcagcgactcaaattttc
ttttcactctctgctgcctggggaggactgataacgctatcttcatacaacaagttccac
aataacatttacagggacactctgttagtgacatgtgccaatagtgccacaagtgtcttt
gcaggcttcgtcattttctcagtcatcggcttcatggctaaggaacttaaagtacccatc
actgaagttgcagatgaaggtcctggcattgcatttgtagtgtatccagaagctctaacc
agactgccattatcaccattctgggctatcattttctttttgatgcttttaacactcgga
ttggacacaatgtttgcaacccttgagaccattgtgacttcagtagtggacgaattccct
ggatacctgagaccgaagaagcccctgttcacattagtctgttgtgtgattttcttcttc
atgggtattcccatggttactcagggtgggatctacatgctacagctggtagacacatat
gcagcttcctattccctggtcatcatagcaatatttgagctagtgggagtttcatacata
tacggcttgaaacgtttttgtgaagatatcgagatgatgattggattccaaccgagctat
ttttggagaatttgttgggcctttgtcactcctacaattcttacattcatcctttgcttc
agcttttaccagtgggaacccatgacatatgaaaattacaaatacccagcttggtcgatg
gtgatgggatggttaatgctggcctgttctgtcatatggatccctatcatgttcgtgatt
aagatgcatttggcccctggttcctttatagagaggcttaagctggtgtgcagccctcaa
cctgactggggtcccttcctcactcagcaccgtgcagaacgctacaagactatgatggat
ccccttgggacctcttccctcggactcaaactgccgcccaaagacatggaattaggacca
cagttctag
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