Chiloscyllium plagiosum (whitespotted bambooshark): 122557667
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Entry
122557667 CDS
T08871
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122557667 (lrrc4ca)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
LRR_R13L1-DRL21
Herpes_gE_N
Sp38
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
122557667
NCBI-ProteinID:
XP_043561419
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All DBs
Position
16:16903992..17898903
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AA seq
640 aa
AA seq
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MLNKMTLHPQQMMIGPKFNRAILDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLREVPDSISINTRYLNLQENGIQVIKADSFKHLRHLEILQLSKNHIRQIEVGAF
NGLTNLNTLELFDNRLSTIPSGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLG
ELKRLEYISDRAFEGLSNLRYLNLGMCNLREIPNLTPLTKLEELELSGNRLSLIRPGSFQ
GLTNLQKLWMMHAQIQVIERNAFDDLQSLIELNLAHNNLTLLPHDLFTPLHHLERVHLHH
NPWNCNCDILWLSWWLKEIVPSNTTCCARCHAPPSLKGNYIGELDQNKFNCYAPVIVEAP
TDLNLTEGMAAELKCRASTSMTSVSWITPNGTIMTHGAYKVRISVLNDGTLNFTNVTAQD
TGLYTCLVSNSAGNTTASATLNVTATENSTFTYFTTVTVETMEPSVQVHTTDDKFRPTPF
SDWDTTFVTTSLTPRSTKSTEKTVTIAITDAGGNLMPGLDEVMKTTKIIIGCFVAITLMA
AVMLIIFYKMRKQHHHQNHHAPTRTIEIINVGDDIAGSTAVESHLTIPAIEHEHMNHYNS
YKTPFNHSTTVNTINSLHSSVHDPLLMRVNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacattgcatccacagcagatgatgataggtccaaagtttaacagg
gccatactcgaccccttatttgtgctgctgttggctctacaactcctcgtggtggccggt
ttggtcagagctcagacttgtccttctgtctgctcctgtagtaaccagttcagcaaagtg
atctgcacaagacggaacttgagggaagtaccagatagcatctccatcaatacacgctat
ttgaacctgcaagagaacgggatccaagtcatcaaagccgacagcttcaagcatttaagg
cacttagagattctacagttgagtaagaaccatatccgacaaattgaggttggagccttc
aatggcctaaccaatctcaacaccctggagctgtttgacaaccgcctttccaccattccg
agtggagcttttgagtacctctccaaactgaaggaactgtggctgaggaacaatccaatt
gaaagcataccgtcatatgctttcaatcgagttccttcccttcggaggttagacttaggt
gaactaaagagacttgaatacatttcggatagagcttttgaaggtctgtcaaacttaaga
tatttgaatcttggtatgtgtaatcttcgggaaatcccaaacctcacacctctgaccaaa
ttggaggaactggaactatcagggaatcggctttcgctaatccgaccgggctcctttcaa
ggtttgacaaacctgcagaaactatggatgatgcatgctcagatccaggtgattgagagg
aatgccttcgatgaccttcagtcactaatagagcttaacctggctcacaacaacctgact
ctgctgcctcatgacctcttcaccccacttcaccacctggagcgtgtccacttgcatcac
aacccatggaactgcaattgtgacattttgtggctgagctggtggctgaaggagattgtg
ccatccaacacaacatgctgcgcccgttgccatgcacccccaagtttaaaagggaattat
atcggggaactggaccagaacaaattcaactgttatgctccagttatagttgaggctccc
actgacctcaatctgacagagggaatggctgcggaattaaaatgtcgagcatcaacctcc
atgacctcagtgagctggattactccaaatggcacaataatgactcacggagcttacaaa
gttcggatttctgtgctcaatgatggcacgttaaattttacaaacgttactgcccaggac
acagggttgtacacttgtttggtgagtaattctgcagggaacacgacagcttcagctacg
ctaaatgtgactgctacagaaaacagcaccttcacttactttacaactgtcaccgtggag
actatggaaccgtctgtacaggtacacacgacagatgacaaatttagacccacacctttc
agtgactgggatactacgtttgtgacaacctccttgactcctcgcagtacaaagtcgacg
gaaaaaacagtcactattgctattactgatgcaggagggaatctcatgcccggcctggat
gaggtgatgaaaactacaaagattattattggttgctttgtagccatcacactgatggcg
gcagtgatgttaatcattttttacaaaatgcgtaaacagcatcaccaccagaatcaccat
gctcccaccaggaccatcgagatcatcaatgtaggtgatgacatcgcaggaagtactgct
gtggagagtcacctgaccatacccgctatagagcacgagcatatgaaccactataactct
tataaaactccgttcaaccacagcaccacagtaaacacaataaactcactacacagctct
gtgcatgatccattactgatgcgagtgaactctaaggacaatgtacaagagacacaaata
tga
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