Chiloscyllium plagiosum (whitespotted bambooshark): 122557737
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Entry
122557737 CDS
T08871
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122557737 (ctr9)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
122557737 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ANAPC3
TPR_Slam
TPR_9
ARM_TT21_4th
PknG_TPR
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
122557737
NCBI-ProteinID:
XP_043561617
LinkDB
All DBs
Position
16:complement(30590899..30651603)
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AA seq
1183 aa
AA seq
DB search
MQTLGPGSGVREAAMLSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWM
ALALEYFKQGKTEDFVKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDA
KKELITQATLLYTMADKIIMYDQNHLLGRACFCLLEGDKMDQAEAQFNFVLNQSPNNIPA
LLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRAL
DLNPKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDY
SKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQGDYDQAFQYYYQATQFASTTFVLPFF
GLGQMYIYRGDKENAAQCFEKVLKAYPNNYETMKILGSLYATSDEQEKREVAKGHLKKVT
EQYPDDVEAWIELAQILEQSDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLG
NLGEAKKYFLASLERAKAEAEHDEHYYNAISVTTSYNLARLYEALCEYHEAEVLYKNVLR
EHPNYVDCYLRLGCMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQ
KKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPK
NLYAANGIGAVLAHKGYVREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYE
NCLKKFYKHQSTEVLLFLARAYFKCGKLQDCKQTLLKARHAAPNDTVLMFNMALVLQRLA
TSVLRDEKSNLKAVLNAVKELELAHRYFKYLSNAGDKMRFDLAQAAAEARQCSDLMSQAQ
YHVARARKQDEEDRELRCKQEQHKEMLRMQMVKEQEDKKQKELNEQRKLLEQRSQFLEKT
RNLLVFNEEMETSKEKKKGGGKRGKKGEFEEFVNDDSDEDLPLPKKKRKQRASGSEPENG
DEEGQQKKRKKRRRPQRAAEDGSEDEETGSQAKKPRRPKAGERKKKEKVKPERLPPSMKG
KIKSKAIISSSDDSSDEGTLKIAEGNARESGSDEDESTDKHRKRIVSESESEDGQNQGKS
DSEVGSSPRSGAARSVANSDSEQSANGQPQSDHSGRSKSASSSSEVEEEESRPASRASRD
SDQQSSDGGGSGQGSAVESDQESNPGDAHQGSASPTQSDDDSD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcagactctgggccctggctccggggttagagaggccgcgatgctgtcgcgcggatcc
atcgagatcccgctccgggacacggatgaggtcattgagcttgattttgaccagctacca
gagggagatgaagtcatcagtattctcaagcaagaacacacccagctccacatatggatg
gccttggcgctggagtacttcaaacaaggaaagacagaagatttcgtaaagttactagaa
gctgcccgtattgatggaaacctggattatcgagatcatgagaaagaccagatgacatgt
ctggacactcttgctgcttactatgtgcaacaggctcggaaagagaagaataaagatgca
aagaaagagcttatcacgcaagctaccttgctgtacaccatggctgataaaatcatcatg
tatgaccagaatcacttgctgggtagagcctgtttctgtctgttggagggggataaaatg
gaccaagctgaagcacagttcaactttgtgctaaatcagtcaccaaataacatccctgca
ctcttgggtaaagcttgtatttcttttaataagaaagattacagaggtgctttggcctat
tacaagaaggcccttcggaccaatcctggatgcccagctgaggttcggctgggaatgggc
cattgctttgtgaagctaagtaaactagagaaagctcgccttgcatttggaagggctctg
gatctcaaccctaaatgtgtcggagcactggtggggctggctgtcctggaactgaacaac
aaagaagctgattccatcaaaaatggcgtgcaactactctcaagagcttacacaatcgat
cccagcaaccccatggtattaaaccacctggccaatcacttcttcttcaaaaaggattac
agcaaagtacagcacctagctcttcatgccttccataatactgaggtggaggctatgcaa
gcagaaagctgttatcaactggctaggtcctttcatgtacagggtgattatgaccaggct
tttcaatactactatcaagccacccagtttgcttccactacctttgtcctgcctttcttt
ggcctgggacagatgtacatttatcgaggggacaaggagaatgcagcgcagtgcttcgag
aaagttctcaaggcctatcccaacaattatgaaacaatgaagattctaggttcactgtat
gccacctcagacgagcaggagaagagagaggttgcaaagggacatttaaagaaagtgact
gaacaatacccagatgatgtagaggcctggattgagctagctcagatccttgaacaatca
gatattcagggtgccctatcagcctatgggacagctacaagaatccttcaggagaaggtg
caagctgacgttcctcctgaaatcctaaacaatgttggagcacttcatttccgactggga
aacttaggagaagccaagaaatacttcctggcatcactcgaacgtgccaaggctgaagca
gagcatgacgagcattactacaatgcaatctcagtcaccacttcctataacctggccaga
ctctacgaggccctgtgtgaataccatgaagccgaagtattatacaagaatgttttaaga
gaacatccaaattatgtggactgttatctacgcttgggctgcatggcaagagacaagggg
aatttttacgaagcctctgattggtttaaagaagctctacagatcaaccaggatcatcca
gatgcatggtcactgattgggaatcttcacttggctaagcaggaatggggaccaggacaa
aagaagtttgaaagaatcttgaaacagccatcaactcaaaatgacacctattccatgttg
gccttgggtaatgtttggcttcagactttgcaccaaccaactagggacagagaaaaggag
aaacggcaccaggaccgggcactggcaatctacaagcaagtgcttcggaatgatcccaag
aatttgtatgctgctaatggcataggtgctgtattggcacacaaagggtatgttcgtgaa
gctcgtgatgtatttgcccaggtgagggaggctacagcagaaataagtgacgtctggcta
aacctagcacatatctatgtagagcagaaacagtatataagtgctgtccagatgtatgag
aactgcttgaagaaattttacaaacaccagagcacagaggtattgctgttcctagcaaga
gcttatttcaaatgtggaaagcttcaggattgcaagcagactttgctgaaggccaggcac
gcggcccctaatgacaccgtgcttatgtttaacatggccttggtgctacagagattagcc
acctctgtcctccgagatgaaaagagcaacttgaaggcagtattgaacgcagtcaaagaa
ctggaactcgcccatcggtatttcaaatatctcagtaatgccggggataaaatgcgattt
gatttggctcaagctgctgcagaggcaagacaatgctctgatctgatgagccaagcccag
tatcatgtggctcgtgcacgcaaacaggatgaagaggatcgtgagctgcgctgcaagcag
gagcagcataaggaaatgctgaggatgcaaatggtcaaagaacaggaggataagaaacag
aaggagctaaatgagcaacgtaagttactggaacaacgaagtcagtttttggaaaaaact
aggaacttgttggtattcaatgaggagatggaaacctcaaaggagaagaaaaagggaggt
ggaaagcgtgggaagaaaggagaatttgaagagtttgttaatgatgattctgatgaagac
ttgccattgcccaaaaagaagaggaagcaaagagcgagtggcagtgaaccggagaacgga
gatgaggaaggccaacaaaagaaaagaaagaagagaagacgaccacagagagctgctgag
gatggcagtgaggatgaagaaactggctcgcaagccaagaagccacgcagacccaaagca
ggagagcggaagaagaaagagaaggttaaacctgaacgactcccaccttccatgaagggt
aaaatcaagtcaaaagcaataatttcatctagtgatgattcctctgatgagggaacactg
aagatagcagaaggaaatgcacgggagagtgggtcagacgaggatgaatccactgacaag
cacaggaagcgaatcgtgtctgagagcgagtcagaggatgggcagaatcagggcaagtca
gacagcgaggtgggcagcagcccaagatcaggggctgcgcgttcagttgccaactctgac
agtgagcagtcagccaatggacagccacagtcagatcactcgggcaggagtaaatctgcc
agctcgtcatcagaagtggaggaggaagagtctcgccctgcttcacgggcctcgagggat
tcagaccagcagtcttctgatggaggaggttcaggccaaggctcagctgttgaatcggat
caagaatctaatcctggggatgctcaccaaggatccgcgtctcccacacaatcagatgat
gacagtgactga
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integrated database retrieval system
