Chiloscyllium plagiosum (whitespotted bambooshark): 122557826
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Entry
122557826 CDS
T08871
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04150
mTOR signaling pathway
cpla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122557826 (lrp5)
04150 mTOR signaling pathway
122557826 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122557826 (lrp5)
Membrane trafficking [BR:
cpla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122557826 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
DUF5050
Vgb_lyase
SGL
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
122557826
NCBI-ProteinID:
XP_043561851
LinkDB
All DBs
Position
16:complement(41297787..41477929)
Genome browser
AA seq
1481 aa
AA seq
DB search
MSRKVLFWEDLDQPRAIALDPQHGYMYWTDWGEIPRIERAGMDGSSRSVIVDTNIYWPNG
LTIDIEEQKLYWADAKLSFIHRSNLDGSFRQEVVQGTLTHPFALTLFGETLYWTDWQTRS
IHACNKRTGANKRDILVSIYSPMDIQVYSQERQPHIHIPCDESNGGCSHLCLLSPKEPFF
KCACPTGVQLEKDGKICKKGAEEVLLLARRTDLRLISLDMPDFTDIILQLDDIRHTIAID
YDPVEGYIYWTDDEVRAIRRALLDGSGAQTLVTTEINHPDGIAVDWIARNLYWTDTGTDR
IEVTRLNGTSRKILIAEGLDEPRAIVLNPVTGYMYWTDWGENPKMERANLDGSDRIILVN
TSLGWPNGLALDYAEGKLYWGDAKTDKIEVINVDGTGRRTLVEDKLPHIFGFTLLGDYIY
WTDWQRRSIERVHKLHAEREIIIDQLPDLMGLKATKVTEIFGTNPCSKNNGGCSHLCLYV
PQGPRCACPMGLELIRDMKTCIVPEAFLLFSSRADIRRISLETNNNDVPIPLTGVKEASA
LDFDISDNRIYWTDISLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWLSKNLYWADTGT
NRIEVARLDGQYRQVLVWKDLDNPRALALDPSDGYMYWTEWGGKPRIVRAHMDGTNSAAL
VDRVGRANGLTIDYVEKRLYWTDLDTSMIESSNMLGKQREIIADDLPHPFGLTQYRDYIY
WTDWNLRSIERADKMNGQNRTRIQGHLDYVMDILVFHSSRQDGWNECVQTNGHCSHLCLA
VPTGYRCRCASHYILDDNNRTCSSPINFLLFSQKTAISRMVLDEHQSPDIILPVHGLRNV
KAVEYDAVDRLIYWVDGRQNVIKRARDDGSQAFVVVSGPNQSQNSDIQPHDLSLDIYSRT
VYWTCETSNTINVNRLNGKPIGIVLRGEHDRPRAIVVNAERGYMYFTNMLERSPKIERAA
LDGTEREVIFSTGLIRPVDLAIDNKLGKLFWVDADLKRIESSDLSGANRLTLQDSSILQP
MGLAILGDYIYWIDRQQQMIECIEKTTGDHRTRIQGRIVHLTSIHAVEELDVAEFSAHPC
SRDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPEQFTCATGEIDCIPMA
WRCDGFPECDDDSDEENCPMCSANHFQCEKGQCIDGRLRCNGEIDCQDKSDEENCAVICR
SNQFRCSSGQCILKKQHCNSVPDCHDGSDERLCELTEASVNDFQSHSSAIGPVIGIILSL
FVMGGMYFVCQRVVCRRYKGPNGPFPHEYISGAPHVPLNFIAPSSSQHGTFTGMSCSKSM
ISSMSLMGGSNGAPLYDRNHVTGASSSSSSSTKGTFYPQILNPPPSPATDRSLYNTEVCY
SSNSPSTTRSYRHYIMQSVAPPTTPCSTDVCDSDYTTSRWKSPKYYVDLNSDSDPYPPPP
TPRSPYMSAEENCESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtaaggtccttttctgggaggatcttgatcaaccaagagctattgcacttgat
ccgcaacatgggtacatgtattggacagactggggagaaataccaagaattgaacgagct
ggcatggatggtagcagtcgttctgtcattgtggacactaatatttactggccaaatgga
ctgacaattgacatagaggaacagaaactttactgggcagatgcaaaactgagttttatt
catagatccaacttggatggctctttcaggcaagaggttgtgcaaggtactctgactcat
ccatttgccctgacattgtttggtgaaaccttatactggacagattggcaaacccgctca
atccatgcttgcaacaagaggactggggcaaacaaacgggacatacttgtcagtatttac
tctcccatggatatccaggtttacagtcaagagagacaaccacacattcatatcccatgt
gatgaaagtaatggaggatgctctcatttatgcctgctttccccaaaagaaccattcttc
aaatgtgcctgcccaactggggtccagctggaaaaagatggaaaaatttgtaaaaaaggt
gctgaagaggtcttgctgcttgccagaagaacagacttacgactcatctccttagacatg
ccagatttcacagatattattcttcagcttgatgatattcgacatacaatagcaatagac
tacgatccagtggagggatatatttactggacggatgatgaagttagagctattcgtcgt
gcattactggatggctcaggggcccagacattggtaactacagaaattaaccacccagat
ggaatagctgttgattggatagcaagaaatctttattggactgatacaggaactgaccgc
attgaagtgaccagacttaatggaacatctagaaaaatactgatagcagaaggtctcgat
gaacctcgagctattgtccttaatccagtgactggctacatgtactggacagattggggt
gaaaacccgaagatggaacgtgcaaaccttgatggctctgaccgaataattttagtaaat
acctctctgggttggcccaatggcttggcattggactatgctgaaggcaaactttactgg
ggtgatgccaaaacagacaaaattgaagtgattaacgtagatggaactggtcgtaggaca
cttgtggaagacaagcttccccacatatttggattcactttattgggggactacatctac
tggactgactggcagagaagaagcattgaacgtgttcataagctccatgcagagagagaa
atcataattgatcagcttcctgatcttatgggactgaaagcaacaaaagtgacagaaata
tttggaacgaacccatgttcgaaaaataatggtggctgcagtcacctgtgtttgtatgta
cctcagggtccacgttgtgcctgtccaatgggcctagagttgataagggacatgaaaacg
tgcattgtacctgaagcgttcctgctgttctccagtagggcagacatccgtagaatttct
ttggagaccaacaacaatgatgtgccaattccattaactggggtgaaggaagcatctgca
cttgactttgacatttctgataacaggatttattggacagacatcagtttaaagaccatt
agccgtgcattcatgaatggaagctctgttgagcacgtgattgagtttggtcttgattac
ccagaaggaatggcagtagactggttgtcaaaaaacctctactgggcagatacgggcacc
aatcgaattgaagtagcacgactggatgggcaatatcggcaggttttggtgtggaaagat
ttggacaatccacgtgctttggctcttgatccttctgatggatacatgtactggactgag
tggggtggtaaaccaagaattgtccgcgcgcacatggatggtacgaatagtgctgcactg
gtggatagagtgggccgtgccaatggacttacaattgactatgtggagaaaagactctac
tggactgacctggatacatcaatgattgaatcttcaaatatgctaggaaaacagcgtgaa
atcatagctgatgatctgccgcatccctttggactgacacaataccgagattacatttat
tggactgactggaatcttcgcagtatcgagcgtgctgacaagatgaatggccaaaatcgt
actcgtattcagggccatttagactatgtgatggacatcttagtttttcattcttcacga
caagatggctggaatgaatgtgtgcaaaccaatggtcattgctctcatctttgcctcgct
gtgccaactggatacagatgtagatgtgcatcacattacattcttgatgataataataga
acttgcagttcacccattaatttcttgctgttcagccagaagactgcaattagtcgtatg
gtgttggatgaacaccagagtccagatataatattgcctgtacatggtttacgtaatgtg
aaggcagtagagtatgatgctgttgacagattaatatactgggtagatggacgacaaaac
gtcattaaaagagctagagatgatggctctcaggcatttgtggttgtttctgggccaaat
caaagccaaaactcagatatacagcctcatgacttgagccttgatatctacagtcgaact
gtctattggacttgtgaaacttccaacaccataaatgttaatagacttaatggaaagccc
atcggaatagttcttcgtggagaacatgaccgaccaagagctattgttgtgaatgcagaa
agagggtatatgtactttacaaatatgttggagaggtccccaaagatagaacgtgcagca
ctggatggcactgaaagagaagtaatattttcaactggattgatcagacctgttgatttg
gcaattgataataaactagggaaacttttctgggtcgatgcagatctaaaacgcattgaa
agcagtgatttatctggtgccaatagactgacattgcaggattccagcatcctgcagcca
atggggcttgctatacttggtgactacatttattggattgaccgtcagcaacagatgatt
gagtgcatagaaaagacaactggagaccatcgaacaagaattcagggtagaattgttcac
ctgactagtatccatgcagttgaagagctagatgtggcagagttcagtgcacacccttgt
tcccgtgataatggtggctgctcacacatctgcattgcaaaaggtgatgggacaccacga
tgctcatgtcccgtacacttggtgttattacagaatctactgacatgtggagaaccacca
acctgttcaccagaacaatttacatgtgctactggagagattgattgtattccaatggca
tggcgttgtgatggctttccagaatgtgatgatgatagtgatgaagaaaactgtccaatg
tgttctgccaatcattttcagtgtgaaaagggccagtgcattgatggacgtttacgatgt
aatggtgaaatagattgtcaagataaatcggatgaggaaaactgtgctgtgatttgccgt
tctaaccagttccgctgtagtagtggtcaatgcattttgaagaaacagcattgcaactca
gttcctgattgccatgatggctcagatgaacgtctttgtgaattaactgaagcttcagtg
aatgatttccagtctcacagcagtgcaattggacctgttattggtataatcctttcactc
ttcgtaatgggtggaatgtactttgtctgccagcgagttgtttgtcgtcgttacaaagga
cctaatggaccttttccacatgaatatatcagtggagccccacatgttccccttaatttc
attgctcccagcagttcccagcatggcactttcactggtatgtcatgtagcaagtccatg
atcagctccatgagtctaatgggaggaagcaatggggccccactatatgatagaaatcac
gtgactggggcctcctctagcagttcttcaagtacaaaaggaactttctatccacagatt
ttgaacccaccgccatccccagcgactgatcgttctctctataacaccgaagtgtgctac
tcctctaacagtccttccactaccaggtcttacagacattacattatgcagagtgtggca
ccacctacaactccatgcagcactgatgtatgtgatagtgattataccacaagccgatgg
aagagtcccaaatactatgtggatctgaactctgattcagatccttatccaccaccccct
acccctcgaagtccatacatgtcagcagaggagaactgtgaaagttgtccaccgtcgccc
tccacagaacgaagttactttcatctctgtcctcccccaccgtctccctgtacagattcc
tcatga
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