Chiloscyllium plagiosum (whitespotted bambooshark): 122557831
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Entry
122557831 CDS
T08871
Symbol
atrn
Name
(RefSeq) attractin
KO
K24332
attractin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cpla04091
]
122557831 (atrn)
Lectins [BR:
cpla04091
]
C-Type lectins
Others
122557831 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
GBD_ATRN
Kelch_KLHDC2_KLHL20_DRC7
Kelch_5
Kelch_1
EGF_LMN_ATRN
Kelch_3
Kelch_4
CUB
PSI
Kelch_6
EGF_TEN
Kelch_2
EGF_Teneurin
PSI_integrin
NANM
EGF_2
TMEM100
Motif
Other DBs
NCBI-GeneID:
122557831
NCBI-ProteinID:
XP_043562276
LinkDB
All DBs
Position
1:complement(11590658..11988542)
Genome browser
AA seq
1415 aa
AA seq
DB search
MSTRRAGARAQCECAGRRAGADAQTAVGIAQAQCRRSVCFFSPSPGDGLRLELKVENMAA
EERRTGSGFRGRLVAVAAGSGSFLTWGVMLVLCVSVCGWPGAQGKECEKRCVHGNCSAAG
GQCVCQAGWVGELCQHCGGRFKLTGQSGYLTDGPGNYKYKTKCTWLIEGQPNTILRLRFI
HFATECSWDHLYVYDGDSVYAPLLAVFSGLIVPEKNGNVTVPEVVSRSGYALLHFFSDAA
YNLTGFNITYSINSCPNNCSGHGECQADADNSTVYCVCSEYWKGEDCNVPYCRDNCGYPH
HGKCDLNDTKACVCNDSWQGPDCSLPANQPFWDWKEYGVPMLARASHKAVVSDDIMWVIG
GYVFNYSEYQMVAAYDLRDLKWFPLNKSANGVVGRYGHSVALYKDKIYMYGGKIDSTGNV
TNQLWVFHTHNQSWMQLTPKAKQQYAVVGHSAHIVQLKDGRVVMLVIFGYCPLYGYISKI
QEYNLGKDTWDILQTNGALVQGGYGHSSVYDPHTKAIYIHGGYKAVSANKYGLTDDLYKY
DVDACTCVWTQEQCFPRPEVGLYISTKSENISGTSAAINPTAPIPSRISCDEWSVLPPPD
LSHDINRFGHSAVFSNGTMYIFGGFNSLLLSDVLMFTPSNCGAFSDEAACLGAAPGVRCV
WNTNMLRCISWEMASAGEAHQILDMCPNKTYADNEKCDQYTDCYSCTVNTNGCQWCHDKC
LSKNSNCTEATVLIWDYEACPKDKPEYVCNKLTSCKSCAMDQNCQWEARNQECIPLPETI
CGESWHLVGNSCLTITTAKENYDNAKLFCRSQNAALASLTSQKKVEFVLKELQIMHVLYK
TIITPWVGLRKINVSYWCWEDMSPFTNTSLQWMMEEPSDAGFCGYLAEPYFASLRAATCI
NPVNGSVCERPANHSAKQCRTPCALRTTCTECTGGNSECMWCSNMKQCVDANAYVPSFPF
GQCMEWYTKNSCQAENCSGYRTCSDCLEQPGCGWCTDPSNTGKGQCIEGSYRGPLKIPAI
NTPYVPVLNVSMCPAETKYNWSFIQCPACQCNGHCKCVNESICEKCEDLTTGKHCETCIS
GYYGDPTNGGSCQSCKCNGHATICNTKTGRCFCTTKGIKGDKCQLCDVETRYQGNPLKGT
CYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEQNRDLDMFINASKNFNLNITWSSSFL
AGTPPGEEMPIVSKTNIKEYRDSFSNEKFDFRNNPNITFFVYVNNFTWPIKIQIAFSQHS
NFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREMQQMASRPFATINVA
LETEEEPPDLIGGSIKTIPKPIALEPCFGNKAAILSIFVRLPRGVGGIPPPGQSGLAVAS
ALVDISQQKSMDHKEKSGAVRNRKHLPPAQPGTCI
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaggagagcgggcgcgcgtgctcagtgtgaatgtgcgggaaggagagcgggc
gcggatgctcagacggcagtgggaattgcgcaggcgcagtgccggcggagtgtgtgtttt
ttttcaccttctcccggggacggtctgcggctcgagctcaaagttgagaacatggcggcg
gaggagcgacggaccggctccgggttccgagggaggctggtggcggtcgctgccggctct
gggagtttcctgacgtggggcgtcatgttggtgctgtgtgtgtcggtgtgcgggtggccc
ggagcccagggcaaggaatgtgagaagcggtgtgtccacgggaactgcagcgcagcgggc
ggtcagtgcgtgtgtcaagccggctgggtcggggagctgtgtcagcactgcggcggcagg
ttcaaattaactggacaatctggatatcttactgatggacctggaaattataaatacaaa
acaaagtgtacttggcttattgaaggacagccaaacacgatattgagacttcgattcatt
cattttgccacagagtgcagctgggaccatttatatgtatatgatggggactctgtatat
gcaccattattagctgtgttcagcggcttaatcgtacctgagaagaatgggaatgtgact
gtacctgaagttgtttcaagatccggttatgctttgctgcattttttcagtgatgctgcc
tataatctaactggattcaacataacgtatagtatcaattcctgcccaaacaattgctca
ggccacggagaatgccaggcagatgctgacaacagcactgtgtactgtgtgtgcagtgaa
tactggaaaggagaagattgtaatgtcccttactgcagagacaattgtgggtatccacat
catggaaagtgtgatttgaatgataccaaagcatgtgtatgcaatgatagctggcaaggt
cccgactgctcattgccagctaatcagcccttttgggattggaaagaatatggggtacct
atgctcgcccgggcatcccataaggccgttgtcagtgacgatatcatgtgggttattgga
ggctatgtgtttaattactcagagtaccagatggttgcagcatacgatctgagggatctg
aaatggtttccattgaataaatctgcaaatggggtcgtcgggagatatgggcattctgtg
gctttgtacaaggataaaatttatatgtatggaggtaaaatcgattcgacagggaatgtc
acaaaccagctctgggtgtttcacactcacaatcaatcatggatgcagctgactccaaag
gctaagcaacagtatgcagttgtcggccactcggcgcatattgtgcagttgaaagatggt
cgtgtagtgatgttggtcatctttgggtactgtccgctttatggatacatcagcaaaata
caagaatacaatcttggtaaagatacatgggatatactgcaaacaaatggagccttggtt
caaggaggatatggtcacagcagtgtttatgacccccacaccaaggcaatttacatacat
ggtggatacaaagctgtcagtgctaataagtatggcctgacagatgacctgtacaagtat
gatgtagatgcatgtacctgtgtatggacacaagagcaatgctttcccagaccagaagtg
ggcctctatatttctacaaaatcagagaacatctcagggacatccgcagccatcaacccc
accgcccccattccgtcaaggatatcttgtgacgagtggtctgtgttgcctccgcctgat
ctttctcatgatatcaatcggtttggtcactcggctgtattcagcaatggcacaatgtac
atttttggtgggttcaacagtcttctgctaagtgacgttttgatgttcacaccaagcaat
tgtggggctttttctgatgaagcggcatgtcttggggcagccccaggagtccgttgtgtg
tggaataccaacatgctgcgatgtatatcctgggaaatggcatctgcaggagaggctcat
cagattcttgatatgtgccccaacaagacatatgcagataatgaaaaatgtgatcagtat
actgattgctacagctgtacagtgaacacaaatggctgtcaatggtgtcatgataagtgt
ttatcgaagaacagtaactgcacagaagccactgtattaatctgggattatgaagcttgt
ccaaaagataaaccagagtatgtttgtaataagctgactagttgtaaaagctgtgctatg
gaccagaactgtcagtgggaagccaggaatcaggaatgcattccattgcctgaaaccatc
tgtggagagagctggcacttggtgggaaactcgtgtttgacaatcaccacggcaaaagaa
aactatgataatgccaagttattctgcaggagtcaaaatgcagcacttgcctctcttaca
tcacagaaaaaagttgaatttgttcttaaggagttacagattatgcatgtgttgtacaaa
actatcataaccccatgggttggattacggaaaattaatgtttcatattggtgctgggaa
gacatgtcacctttcacaaacacatcattgcaatggatgatggaagagccaagtgatgca
ggattctgtggttatttggcagaaccttattttgcgagtttgagagcagcaacctgcatc
aacccagtaaatggcagtgtgtgtgaaagaccagcaaaccacagtgcgaagcagtgccga
acaccttgtgcgctgagaacaacctgtactgaatgcaccggtggcaactctgagtgtatg
tggtgcagtaacatgaagcaatgtgtggatgcgaatgcatatgtgccttcctttccattt
ggccagtgtatggagtggtacaccaagaacagctgtcaagctgaaaattgttctggttat
cgaacatgcagtgactgcttggagcagccaggatgcggatggtgtactgaccccagcaat
acaggcaagggacagtgtatagaaggatcttatcgaggaccattgaaaatacctgcaata
aatactccatatgttccagttttgaatgtcagcatgtgcccagcagaaacaaaatacaac
tggtcctttatccagtgtccagcttgtcagtgtaatggccattgcaagtgtgttaatgaa
agcatctgtgaaaaatgtgaagacttaacaactggcaaacactgtgaaacgtgcatttct
ggttattatggcgatcctacaaatggagggagctgccaatcctgcaaatgcaatggacat
gcaaccatctgcaacaccaagacaggaagatgtttctgcacgacaaaaggaatcaaaggc
gacaagtgtcaactatgtgacgttgaaacacgataccagggtaacccactgaaagggacc
tgttactatactctactgattgactaccagttcaccttcagcctctctcaagaggatgat
cgttactacactgccatcaattttgtagccacccctgaagaacaaaaccgagacttggac
atgtttattaatgcgtcaaagaatttcaacctcaatataacgtggtctagtagcttttta
gcgggcacaccacctggagaagaaatgccaattgtttcaaaaactaacattaaggaatac
agggacagcttctcgaatgagaaatttgattttcgtaacaatcccaatataactttcttt
gtgtatgtcaacaacttcacctggcccattaagatacagattgccttttctcagcacagc
aactttatggaccttgtgcagttctttgtcacttttttcagttgttttctgtcgttacta
ttggtggctgctgtggtgtggaagattaaacagagctgctgggcatcaaggcggagagag
caacttctacgtgagatgcagcagatggccagtcgcccttttgccaccatcaatgttgcc
ttggagacagaagaggagccacctgatctcattggtggaagcattaagactatccctaaa
cccattgcgttagagccgtgctttggtaataaagcagctattctctcgatatttgtacga
ttaccaagaggagtgggaggaataccaccaccagggcagtcaggtcttgctgtagccagt
gcgttagttgacatttcccagcaaaaatcaatggatcacaaagagaagtctggagctgtg
aggaataggaaacaccttccccctgcacaaccgggcacctgcatttga
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