Chiloscyllium plagiosum (whitespotted bambooshark): 122557860
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Entry
122557860 CDS
T08871
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122557860 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
122557860 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
cpla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122557860 (pdlim3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
122557860
NCBI-ProteinID:
XP_043561932
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Position
2:complement(26919843..27026955)
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AA seq
319 aa
AA seq
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MPQNVVLTGPGPWGFRLTGGADFNQSLTVSRVTPGSKASLANLSPGDVILAIDGISTDAM
THVDAQNRIKAATSQLSLKINRPETKLWSPQVTEDGKANPFKINLEAEPQEFKSIGESHN
RKAQPFLAAGNIDGKRQVVSATYNTPIGLYSADNIQDAIQGQLHGVAIDPQEKVEPAPGV
ENSAVYKMLHSNQEEKSEPRQSGSFRAIQDYLEADESGTRPVVTRSVRAPVTKVGASTGS
VQKLPLCDKCGNGIVGTVVKARDKYRHPECFVCSDCGMNLKQKGYFFIEGQLYCEAHARA
RTKPPEGCDAVPVYQNMKA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaacgtggttttgacaggaccagggccgtggggttttcgactgaccggtggg
gcggattttaaccagtctctgaccgtctcccgggtaacacctggaagcaaggcatcacta
gctaatctctcccctggtgatgttatcctagccattgacggaataagtacagatgctatg
acacatgttgatgctcagaataggatcaaggctgctaccagtcagttaagcctcaagatc
aaccggcctgaaactaagctttggtctcctcaagtcactgaagatggcaaggcaaatccc
ttcaagattaatttagaggcagaaccacaggaattcaaatctattggagagtcccataac
agaaaggcccagccatttcttgctgcaggaaacattgatggcaaaagacaggtagtgagt
gccacctataacactccaattggcctatattctgctgacaacatacaagatgccatccag
ggacaactgcatggcgtggccattgacccacaggagaaagttgaaccagcaccaggagtt
gaaaactcagcagtctacaagatgctacacagcaaccaggaggaaaagagtgagccgaga
caatctgggtccttccgtgcaatccaggattacctggaagcagatgaaagtggtacccgg
cctgtggtgactcgaagtgtgagggctccagtgacaaaagttggtgcttccacaggaagt
gttcagaagctgccactctgtgacaagtgtggaaatggaatagttggcactgtagtgaag
gcccgtgacaagtatcgacacccggaatgctttgtttgttccgactgtggcatgaacctc
aagcagaaaggttactttttcatagagggacaactgtactgtgaagcccatgcaagagca
agaacaaagccacccgagggatgtgacgctgtccccgtttatcagaatatgaaggcttaa
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