Chiloscyllium plagiosum (whitespotted bambooshark): 122557899
Help
Entry
122557899 CDS
T08871
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03022
Basal transcription factors
cpla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122557899 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
122557899 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122557899 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122557899 (gtf2h1)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122557899 (gtf2h1)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122557899 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
122557899
NCBI-ProteinID:
XP_043562034
LinkDB
All DBs
Position
16:50943547..51014997
Genome browser
AA seq
547 aa
AA seq
DB search
MATSSEEVLLIVKKVRHKKQDGALYLMAERVAWTPEGKDRFVISHMYADIRCQKISPEGK
AKVQLQLILHTGDTTIFHFTNDNSASAAAKDRDAAKDLLQQLLPKFKKKANKELEEKNRM
LQEDPVLFQLYKDLVVSQVISAEEFWANRLAGNSVDNSVSGNKQDIGVSAAFLADIRPQT
DGCNGLRYNLTSDIIESIFRTYPAVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRINAG
SKDLFSECARIDEKGLKTLVSQGVKNPLVDLTSLEDKSLGEGYGSSAPTSSKPNKESSNA
AIIRRFNHHSAMVLAAVLRKQETQNDQSNENNSTDGNSRDSDCFQPPVKKVKLQEAIEYE
DLGEKNSKKTVALNLKKADRYFHGPTPVQSQHYTSSQDIINSVHCIRQEMANYNPNLAQV
LSSSMASSAITDLSPGGVLMQGGTSQAVNQIMPSDVQMELKHLYVAVAELLRHFWSCFPV
NTPFLEEKVGKMMNNLERFQMTKLRPFREKLQKLYISTNLTGHLEDMLQVAFSKFHAWQS
KRMLKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcatcagaggaggttctgctcattgtgaagaaagtacggcataaaaaacag
gatggggcgttatatctgatggcagagcgtgtagcatggacaccggagggaaaggatcgt
tttgtcattagtcacatgtatgcagatatccgctgtcagaagattagccctgaagggaag
gcaaaagttcagctccagctgattttacatacaggtgacactacaatcttccatttcact
aatgataacagtgctagtgcagcagccaaagatcgtgatgctgcgaaggacttgctccaa
cagctgctccctaagttcaagaaaaaagccaacaaggaactggaggagaaaaacagaatg
cttcaggaggacccagttctctttcaactctataaagacctggttgtgagccaggtgatc
agtgctgaagagttttgggccaaccggctggctggaaattccgtggataactctgtctct
ggtaacaagcaggatattggagtttctgctgctttcctggcggatatcagacctcagact
gatggctgtaatggcctcaggtataatctgacctctgacatcattgaatccatttttcgg
acttatcctgctgtgaaacagaagtatgcagagaacgttcctcacaacatgactgagaaa
gaattctggacccgcttttttcagtctcactacttccacagggataggatcaatgctggt
tcaaaggatctcttctctgaatgtgccaggatcgatgaaaaaggtttgaagactctggtt
agtcagggagtgaagaaccctctggtggatttgacatcgctggaggacaaatcattgggt
gagggttatggatcctcagcacctacatcctccaaacctaacaaggaaagcagcaatgct
gctattatccgtcgcttcaatcatcatagtgccatggttctggcagccgtcctccgcaaa
caagaaactcaaaacgatcagagcaatgagaacaacagcactgatggtaattcccgtgat
tcagactgcttccagccaccggtcaagaaggtgaagctgcaggaagccatagagtatgaa
gatttgggagagaagaactcaaagaagacagttgcattaaatttgaagaaagcagacaga
tatttccatggtccaacgcctgttcagtctcaacattacacatctagccaggatatcatt
aattcagtgcactgtattcgacaagaaatggcaaattacaatcctaatcttgctcaggtt
ctgtccagcagcatggctagtagcgcaattactgacttgtcacctggtggagtgctcatg
cagggaggaacatcccaagctgtaaaccagattatgccaagtgatgtccagatggaactc
aaacatttgtatgttgcagtggcggagttactgagacatttctggtcctgttttcctgtc
aatacaccattccttgaggagaaggttgggaagatgatgaataacctggaaagatttcag
atgacaaaactacggccattccgagagaagctgcagaagctatacatcagtacaaacttg
actggccatttagaagatatgctacaggtagctttcagtaaatttcatgcttggcaatca
aaaagaatgctaaaaaagacgtga
DBGET
integrated database retrieval system
