Chiloscyllium plagiosum (whitespotted bambooshark): 122557906
Help
Entry
122557906 CDS
T08871
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122557906
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122557906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
122557906
NCBI-ProteinID:
XP_043562049
LinkDB
All DBs
Position
2:112497200..112581074
Genome browser
AA seq
1135 aa
AA seq
DB search
MVHVCYAIKDCSTVLSGTTKDFLEFRIWQSESFYGSVSSLRLGEPQIQKNAFQHKPVSEL
IELLNVSPEDLMSTPVKSLWGEYMKVTSILRDIVEQLHLGHDEVKEMLTAKLEEFSPVPM
VQLEKCTDNTALINANKVSIEMYPENKEATYSSTHESISMGYKTLTLQSQNLPTISHKAS
IDSVDGYNTMMKAYQDDSDPLSNFIMLRSKQVSAPDCQTKSDNENPTYPVNESINKTEVS
SKLQMPKIVSVQENDQQDQNRTLINIEASESQRQAYYLLESTAIPVLKQLKGFAIHISAE
TFTTLSFDHTRFFLKHQEKVVSDSAKQGKHDEIEIQLYKHAALLHLLVTVRDLLLMCDLD
TAIAYLFKTKDIYVTTLGSCLDDVWKKLRIVQYVSQSKQESNPKVTELEDQILMWIQNTH
IREQKVLIIIRMDSDCVRGTLINSLTKVKDFSPAAAYPKKNVTLSREEVLNCLERHRSLV
VYSHHIGADFPWIEFSLVVEYDYMENSCWAELCTQHNINYMIFKIRLPKGSETGDMLTIK
SEFLLMELQIPYIFLMSEGLLNIPIMLQLLESRYNITLLERTSNEMLGSFGGADHYAIIT
VDERTAIIIQVVLAPGITETTQVVRQIADITLLSSNQDPFTWLDRSWLSTLPTEDEKQLL
DFPSLNSLVAQLMLRKSPSMEWLLSATFNELQEILPEVPGKALKLFSEITALHRLGSSQE
SRKSQKESPSDKVVLSFTPSMSGMVDHQLHSGYDILKNVHSERPEESEGLEMINTCEPRD
LWETGNVFSKTQIQNFRPIFQSRPAILSPCYQLKNHLHSKVKQMTDHKKNGLPQNFESSD
YSVEVQCQGRTGSGCTVPFVNSHQVEHKLFDHPSHLALKKNSDLGEPDIYFEKSTMSSLD
KFSMGEHIYTAEHKYQKKAKERLGVKSSSSAQYGFVPQHDISVLHYGLKDEASDITAMQN
VKNHHHMSPYQAYPVLSGKHLDNSFYQLSEPFCHQHNKAIGENHEQMLYVNPNFSVYNSE
IEYSDTDKSEICNSTYFPSKTTDFCNGIVEGQAFNYELFQRKGNKRQCTETKVNEWRSSP
ASCIEEYLPDTATFYTYSATSPEPRYKILPEAKKRRLAYEKVPGRIDGQTRLVFF
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgtctgttatgcaattaaagattgcagtacagttctatctggaacaaccaaa
gatttcctggaatttcggatatggcagtcagaaagtttctacggatctgtttcatccctg
aggttgggagaacctcaaatacagaaaaatgcttttcagcataaaccagtctctgagctg
attgagctgctaaatgtctctcctgaggacctcatgagcactccagtgaaaagtttatgg
ggagaatatatgaaagtaacttcaattctgagagacatagtggaacaactgcacttgggc
catgatgaagtaaaagaaatgctgactgcaaaattggaagaattttcaccagtccccatg
gttcagctggagaaatgtacagataatactgcgttaattaatgcaaataaagtttctatt
gaaatgtaccctgaaaacaaagaggcaacatattccagtacacatgaaagcataagtatg
ggatataaaacattaactttacaatcacaaaatttaccaaccatttcccacaaggcctcc
attgattctgtggatggctacaacaccatgatgaaagcttaccaagatgacagtgatcct
ctcagcaacttcatcatgcttcggtccaagcaggtttcagcacctgattgtcagacaaaa
agtgacaatgaaaatccgacatatcctgtcaatgaaagtattaacaaaactgaagtgagc
agtaaattgcaaatgccaaaaatagtttccgtgcaggaaaatgaccaacaagatcaaaac
agaactttaatcaatattgaagcatcagaaagccagcgtcaagcatactatttgttggag
tccacagcaatccctgttctcaaacagttgaagggctttgctattcatatatctgcagaa
acatttactacactttcttttgaccacactaggtttttcctaaagcatcaagagaaggta
gtgagtgatagtgctaaacaaggcaagcatgatgaaattgaaattcaattatacaagcac
gcagcgctgcttcatctattggtgacggttcgagatcttctgttgatgtgtgaccttgat
actgctatcgcatacttattcaaaaccaaggatatttatgtaaccactttgggttcatgt
ttagatgatgtttggaaaaagcttcgaattgttcagtatgtcagtcagagtaaacaagaa
agcaatcccaaagtaactgaacttgaggatcagattttaatgtggatacaaaatactcac
ataagggaacagaaggtattaatcatcatcaggatggattcagattgtgttagaggtaca
cttataaacagcctcaccaaagtaaaagatttcagtccagctgcagcttatccaaagaaa
aatgtgactttaagtcgagaggaagttttaaactgcctggaaagacatagaagtttggtt
gtctacagtcatcacatcggagcagatttcccttggattgagttctctttggtggtcgaa
tacgattacatggagaattcgtgctgggctgaactctgcacacagcataatataaattat
atgatctttaaaatcagacttccaaaaggttcagaaacaggagatatgctaacaattaag
tctgagtttctgttgatggagctgcagattccatacatttttttgatgtctgaaggcttg
ttgaatattccaattatgcttcaacttctagaatcaaggtacaatataactcttttggag
agaaccagtaacgagatgctaggctcatttggaggtgcagatcactatgccattattaca
gttgatgaacgcactgctataataatccaggttgtacttgcaccaggaattacagagaca
acgcaagtagttcgccaaatagcagatatcaccttgctttcaagcaatcaggatccattc
acatggcttgacagatcttggctttctactcttccaactgaggatgaaaagcagctactt
gattttcccagtttaaattcattggttgcccaattaatgctcagaaaatctccatcaatg
gagtggcttctgtcagcgacttttaatgaattgcaggaaatccttcctgaggttccagga
aaagctctgaagcttttcagtgagatcactgcattgcacaggcttggctcatcacaagaa
tcaagaaaatcacaaaaggaatcaccttctgacaaagttgtgttaagttttacaccatct
atgtctggaatggttgatcatcagcttcactcaggttatgatatactaaagaacgttcac
tcagagagacctgaagaatcagaaggtttggaaatgattaatacttgtgaaccaagggat
ctatgggagactgggaatgtgttctccaagactcaaattcagaatttcagaccaatcttt
caatccaggcctgctatcctttcaccttgctatcagttgaagaatcacttgcattcaaaa
gtgaagcaaatgacagatcataagaaaaatggtctacctcagaattttgaaagttcggat
tacagtgttgaagtgcagtgtcagggcagaacaggctctggatgcactgtcccatttgta
aattctcatcaagtagaacataaattatttgatcatccgagtcatctagccttaaagaaa
aactcagatcttggggagcctgacatttattttgaaaagagcacaatgtcttctctggac
aagttttccatgggtgagcacatatacactgcagaacataagtatcaaaaaaaagcaaaa
gaaaggctgggtgtaaaatcaagcagcagtgcacagtatggcttcgttcctcagcatgac
attagtgtacttcactatgggttgaaagatgaggccagtgacattacagcaatgcagaat
gtcaagaatcatcaccacatgtctccttatcaagcttacccagtcttatctggaaaacat
ttggataattcattttaccaactgagtgaaccattctgtcaccaacataataaagctatt
ggagaaaatcatgaacaaatgctgtatgttaatcctaatttttcagtttataactcagag
attgagtattcggatacagacaagtctgaaatttgtaacagtacctattttccttctaaa
acaactgatttttgcaatggaattgtagaagggcaggccttcaattatgaattatttcag
agaaaaggaaacaagaggcaatgtaccgagactaaagtgaatgagtggagaagttcacct
gcatcatgtatagaagaatatttacctgatacagcaacattttatacctattcagcaact
tcaccagaaccaagatacaaaattttaccagaagcaaagaaacgacgactcgcctacgaa
aaggttcctggaagaattgatgggcagacccgcctcgtattcttttga
DBGET
integrated database retrieval system
