Chiloscyllium plagiosum (whitespotted bambooshark): 122557941
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Entry
122557941 CDS
T08871
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpla04040
]
122557941 (trpm5)
Ion channels [BR:
cpla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122557941 (trpm5)
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
YhfG
Motif
Other DBs
NCBI-GeneID:
122557941
NCBI-ProteinID:
XP_043562114
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Position
16:complement(56528994..56644102)
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AA seq
1217 aa
AA seq
DB search
MDKLGRELTESPEMTNSEERQQTTHFIKEECVTCGESRGSQINISGKRTCRCVQSREEQT
EVTGEELTREQKYNGRNVKEPSYNVGEVEFFGFGKKHGKFVQVSCNTHPAAIFELLTGDW
NLPAPNLVVSIVGGEENVLMKPWLRDTIRKGLVKAAQSTGAWIITSGLRAGITKHIGEAV
RDHAMANTCSKIKVFAIGISPWRIISDREALANVKKHCPAIYQVEETTEGPLYSLDNNHS
HFILVDDATPNGTTTLWLKLLKHISEQRTGYAGTGSIEIPVLCVLVHGHPELLQKVYQGM
ENSVPWLVLAGSGGIADVIASLMHGPLVPETVQEQLQEKFPRETFSGENILKWTKLIQNI
MAKDHILTVHNSEQESSEDLDTIMLKALVKACKSQTQKAQEYLDELKLAVAWNRVDIAKN
EIFNGDVEWKSCDLEEVMMDALVNDKPEFVRLFIDNGMNMNDFLTYGRLQELYRSISQKS
LLYELLLKKHEEQRLTISGMNSTSHRHTPEKRPKFTLYEVSKVLKDFLHDACKGIFQESN
PSRKHLGVKKSITELNSKLRGQRLFVMPDLSQKLENPWRDLFLWAILQNRQEMANYFWEM
GPEAVPAALVACKILKEMAHLESDTETSQSMKKAKYDQLALDLFGQCYTNSEDRAFYLLI
RKTKYWSKTTCLQLATEADAKSFFAHDGVQALLTKIWWGDMSTDTPIWKLLCGFWCPPLI
FTNLITFSAHFPSIGKSEQLKELDSLDTEKAFLLHDEANSDHDAKDKKRLCGGNQRREFI
LRRWKKFWGAPVTVFLGNVILYFAFLSLFAYILLVDFKPPPPIGPSMAEVTLYFWVFTLA
LEELRQSFFTEGNTNIVKKFKLYVEDSWNKCDMVALVLFIAGVTCRMLTVSYNAGRTTLC
LDFMVFALRLIHIFAINKQLGPKIIIVERMMKDVFFFLFFLTVWLIAYGVATQALLHPNE
TRVDWIFRNVLYRPYLQIFGQIPLDEIDEVRMVNRSCFSNQANMTNEDNLPYCINRYANW
LVIMLLVVFLLVTNVLLLNLLIAMFSYTFQLVQGNTDIFWKFQRYNLIVEYHSRPALAPP
FIIISHLNLFIRKIIKEPQHKQEHFEKHLPETLDQKLRIWESVQKENYLASLEKGKKESS
TERLKKTSTKVDSLLKSISGLQEQEKRLVTLETRMKYCSDVLSWMIESFTQHNMHCSRPP
PTYTGILILHQLSLLIQ
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattagggagagaattgactgaaagtccggaaatgaccaacagtgaggaacgg
cagcagaccacccattttattaaagaagagtgtgttacctgtggagagagccgaggatca
caaataaacataagtggaaagagaacttgccggtgtgtacagtctagagaggaacaaaca
gaggtgacaggagaggaactgacgagagagcaaaaatacaacggtcgcaatgttaaagaa
cccagttacaatgttggagaggttgagttttttggatttggcaagaaacatggcaagttc
gtacaagtgtcctgtaacactcacccagctgctatctttgagttgctgactggagattgg
aatttgccggccccaaacctagttgtctcaatcgttggaggagaggaaaatgtcctgatg
aaaccatggcttcgggataccatccggaaaggccttgtgaaagcagctcaaagcacagga
gcttggattattacaagtggtttgcgagctggaatcaccaaacacatcggggaggcagtc
cgtgatcatgccatggccaacacatgctctaaaatcaaagtctttgcaataggaatatcg
ccgtggagaataatttctgaccgtgaagccttagccaatgttaagaaacattgtccagca
atataccaagttgaggagacaactgaaggtcctctttactccttggataacaaccattcc
catttcatcctggtggatgatgccactcccaatgggaccaccacattgtggctcaaacta
ctgaaacatatttctgaacagcggactggctatgcaggaactggcagtattgaaattcct
gtgctctgcgttcttgtccatggtcatccagaactattgcagaaagtgtaccaagggatg
gaaaactctgttccgtggctagtcctggcaggatctggaggcattgctgatgttattgcc
tcgttgatgcatggacctttggttccagagactgtacaagaacaacttcaggaaaaattc
ccaagggaaaccttttccggggagaatattctcaaatggaccaaactgattcaaaacatt
atggccaaagaccatattttaacagtacacaactcagaacaggagagttctgaggacttg
gacacaattatgctgaaagcccttgtcaaagcatgtaagagtcagactcagaaagcccag
gagtatctggatgaactaaaacttgctgtagcctggaacagggtggacattgccaagaat
gagattttcaatggtgatgtggagtggaagtcttgtgacctggaagaagtaatgatggat
gccttggtgaatgacaagccagagtttgtccggctgttcattgacaatgggatgaatatg
aatgacttcctcacctatggccggctccaggaactctaccgttccatctcgcagaagagc
ctcctgtatgagctcttactgaagaaacacgaggagcagagacttactataagtggcatg
aactccacttcacaccgtcatacaccagagaagaggcccaagtttaccctatatgaagta
tctaaagtgctaaaggatttcctacacgatgcatgcaagggtattttccaggagtccaac
ccctctcgcaagcatttgggtgttaagaaatcaataacagaattgaacagcaaattacgc
ggtcagaggttgtttgtgatgcctgatttaagccagaagctggaaaacccttggagggac
ctctttttgtgggctatcctacagaaccgacaagaaatggctaactacttctgggaaatg
ggtccagaagcagtgcctgcagcactggtcgcatgcaagattttgaaagaaatggctcac
ttggaatcggacactgagacatctcagagcatgaagaaggccaaatatgatcaactggca
ctagacctctttggccagtgttacactaacagtgaggacagagctttctacttgctgatt
cgcaagaccaagtactggagcaagaccacttgcctgcagttagcgacagaagcagatgct
aaatccttctttgcacatgacggtgttcaggcactgttgacaaaaatctggtggggcgat
atgtcaacggatactccaatctggaagttgttgtgtgggttctggtgtcctcctctgata
ttcaccaaccttatcaccttcagtgcacatttcccatccataggtaaatctgaacagttg
aaagaactggacagcttggacactgagaaggcttttctgctccatgatgaggcaaacagc
gatcatgacgcaaaggataaaaaaaggctttgtggagggaaccaacggagagaattcatt
ttaagaaggtggaagaaattctggggtgctccagtcactgtattcctggggaatgtgatc
ctgtattttgcattcctgtctcttttcgcatacattttgctagtggatttcaagccccct
ccccctattggtccttctatggcagaggtaacgctgtacttctgggttttcactctggcg
ctggaggagctgagacagagttttttcactgagggaaatacgaacatagtgaagaaattt
aaactgtatgtagaggactcctggaacaagtgcgacatggtggccttggtgctgttcatt
gcaggagtgacgtgcagaatgctaacagtctcctataatgcgggccgcacgactctgtgc
ctggatttcatggtgtttgctctgaggctgatccacatctttgccatcaataaacaattg
ggtccgaagatcatcattgtggaacgaatgatgaaagatgtcttcttcttcttattcttt
ctgactgtttggctcattgcttatggcgtggccactcaggctctgctccaccccaatgag
actcgcgtggattggatcttcaggaatgttctctacaggccttaccttcagatatttggc
cagattcccctggatgaaatagacgaggttcggatggtcaaccgatcctgcttcagtaac
caagccaacatgacaaatgaagataatttaccctattgcattaatcgttatgcaaattgg
ctggtcatcatgcttctggttgtcttcctgctggtcactaacgtgctgctgttgaatctt
ctaattgcaatgttcagctataccttccagcttgtccagggaaacactgacatattctgg
aaatttcagcgctacaacctaattgttgagtatcacagcaggcctgctctggctccaccc
ttcatcatcatcagccacttaaaccttttcattcgaaagattattaaagaaccacagcac
aagcaggagcattttgaaaagcacttaccagagaccttggaccagaagctcagaatctgg
gagtctgtgcaaaaagaaaattatttagccagtttggaaaagggaaagaaagaaagcagc
actgaaagattgaagaagacatcaaccaaggtagattcattattgaaatcaatcagtggt
cttcaagaacaagagaaacgtctcgtaacacttgaaacaaggatgaaatactgcagtgat
gttctatcctggatgattgaatcctttactcagcacaatatgcattgcagcagaccacct
ccaacatatacaggtattcttattttacatcaactaagcttgctgatacagtaa
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