Chiloscyllium plagiosum (whitespotted bambooshark): 122558120
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Entry
122558120 CDS
T08871
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122558120 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122558120 (nup160)
03036 Chromosome and associated proteins [BR:
cpla03036
]
122558120 (nup160)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122558120 (nup160)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122558120 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
122558120
NCBI-ProteinID:
XP_043562373
LinkDB
All DBs
Position
16:complement(65916666..65996874)
Genome browser
AA seq
1376 aa
AA seq
DB search
MSLYPTGVNAIPGVKYSDSAGGFFYEDSGRLQSVTRSRFIHWTTSGDTLQLTEQSLDCNL
LNNTVRIKFLNCHVLPGGVHVHETHDRVTLLILTNRTVHRIVLPHPSRMYRSELITDGHI
QSIFTDIGKLNLRDPANSFMIPGVQGHSTNSTASATWLNSDGDALFALASWSGGILIIQL
PEQDTAGNPVLLELKHSSVMQRLLTGWMPTAIRGDQGPSDLPVSLAVQLLEHDAFIFALC
QDHKLRLWSFKDQVCLMVADLLVFVPVNKELRHTVSLGHKLRLAYSSSGFFLAVYLHCPK
RGQFCVFQLVSCIESNRYSLDHISTLFSTQEPLVDFALTPTDIWALWQDEDNQASVRYIS
FEHNNAGQWNQVFTQPVADEELHVPEDQDPKEAYLEYLFAPGRFAAQALLKALQIYCRGA
DRIVDPTVDGLKKEVTLAVENAIQSSVTEYEFSQEVYRQLQVEFWSKFYACCLQYQEALA
RPLALLVNARTNMVCLLKKGFLSFFFPCLAIDHLYMSSDECLFLEDECSLTDDPDVARDL
HRLVQCLRLVGDAITLEMASLMETAVSHLHPPEKAAEQILEFLLARDTETHMELQSKLQD
IRNPGNIIQLLLREMDQEGDLDTGDAQPLHIRMNMAQFFGSNIAINIVCRAVSHISTTRF
LICRDLLILEQLMLHLGDSMNLGAGGYLLQLQQDLIPRTSLLVCSYFVVRWASRSLASAV
PIDMLESNLRQLSVLELTDSRDVTSQRPVTGPSTVVELFYRSVARKHILSRLLAQANSPL
NQPLINYTQVGIALASHLLQYLWANNSSFLFAEFLMGHCQYVQLQEYVRLLQPWCEVNVG
SRRFVLGQCYLVTGEGHKALECFCDAAAAVDREEFLDRLIQVEDEEAASNPRVQYYNKVL
RLLEDMALPALVLQLAAIAVTEARDDWKILAALWTKIFKHHLDLGHNHQAYESLTQNPDS
SRQLDCLRQLVVVLCERSQLQDLVEFPYINLHDEVVGIIESRARAVDLMTHNYYELLYAF
HVQRHNFRKAGTVMFEYGMRLGREVRSLDGLRKQVNCYLVGINCLRQIRSEYAWIVRPVC
GATYERPGASPKRSYDGELTAPQVCHQIDIVELKDLEKEFVLARTRLLLAKHDPGSAAIA
GSASAEEMVALLVQVGLFDAAVSLCQTFRLSLNPIFEGLSFKCIKLQLIGEAAQSDAWDW
LKANQIPSIIATKESSATDEAWRLLSSYLDRYQSPSSQYHRCVINKLLSHGVPLPNWLIN
SYKKVDVAGLLRLYLNYDLLEEAVELVLEYVDALMGKGPQYFNMERSLSATAPPVWLPYT
AIDQLLQALGENSGNLSNVRLCEKLRSRLADYHQQVDQTTLDMNSYRRQQQQQQLL
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctatcctacaggtgtgaacgccatcccaggagtgaaatattctgatagtgct
ggaggatttttctatgaagacagtgggaggctgcaatcagtcaccaggagtcgcttcata
cactggaccacgtctggtgacaccttgcagctgacggaacagtccctggattgtaacctc
ctcaacaacacggtccgcatcaagttcctgaattgtcacgtgcttccaggtggcgtccat
gtacacgagactcatgaccgtgtgaccctgctcattctgaccaaccggactgtgcacagg
attgtgctgccgcacccctcgcgcatgtaccggagtgagctgatcactgacgggcatatc
caatccatcttcactgacattgggaagttaaacctgcgtgacccagcaaacagttttatg
attcccggtgtccagggccactctactaactcgacagcctccgccacttggctgaacagt
gatggggatgctctgtttgcactcgcatcttggtctggaggcattctcattatccaactc
cctgagcaagacacagcaggtaatccggttttactggaactcaaacatagctcggtcatg
cagcgcttactgaccgggtggatgccgactgcaatcagaggtgaccagggcccttcagac
ctgccagtcagtcttgcagtccagcttttggaacacgatgctttcatctttgctctctgt
caggaccacaagctccgactttggtccttcaaggatcaggtttgcctgatggttgcggat
ttgctggtttttgtgcctgtcaacaaggagctgcgacacacagtcagtctgggtcataag
ctgcgtttggcctactcctcctctggtttcttcttggctgtttacctgcattgccccaaa
cgtggacagttctgtgtcttccagttggtgagctgcattgagagtaaccgctacagtctg
gatcacatctctacactcttctccacacaggaaccgctggtggattttgccctcactccc
actgatatctgggctttgtggcaagatgaggacaaccaggcgagcgtacgatacatcagc
tttgagcataacaacgctgggcagtggaatcaggttttcacgcagcctgtagctgatgaa
gaattacatgtaccagaggatcaggaccctaaggaagcctacctggaatacctctttgcc
ccaggccggtttgcagctcaagccctgctgaaagctctgcagatatattgtcgaggggca
gatagaatcgtggacccaaccgtggatgggctgaagaaggaagtgacgttagctgtggaa
aatgcgattcagagtagtgtgactgagtacgagttctcgcaggaggtctaccgtcagctg
caggtggaattctggtccaagttctatgcctgctgcctacagtaccaggaggccctggca
cgacctctcgcattgctcgtcaatgcacgcaccaacatggtgtgcctgctgaaaaagggg
tttctgtctttctttttcccctgccttgccattgatcatctctacatgtcttcagacgag
tgtctgtttctggaagacgagtgttccctcacggatgatccagatgtagctagggacctg
catcgcttggtgcagtgtctccggctggtgggagacgccatcactttggaaatggcctcg
ttgatggaaacagcagtgagccacctccatccccctgaaaaggctgcagagcagatcctc
gagttccttctggccagagacactgagacgcatatggagcttcaaagtaaattgcaggat
atccgtaacccagggaacataatccagctgctgctgcgggaaatggaccaggagggtgac
ctggacacaggcgatgcccagcctctgcacattcggatgaacatggctcagttctttggc
agcaacattgccattaacattgtgtgtcgggcagtgtcccacatatccacaactcggttc
ctcatctgccgggacctactgattctggagcagctcatgttgcacctcggagatagtatg
aatctgggagctggtggctacctcctgcagctccaacaggatctcattcctcggacctct
ctcctcgtgtgttcctactttgtggtcaggtgggcaagtcggtcgttggcatcagccgtg
cctattgacatgctggaatcaaatctgcggcagttatctgtgttggagttgactgactct
cgtgatgtaacatcccaacggccagtcactgggcccagcacagtggtggagttgttctat
cggagtgtggccaggaagcacattctctcccggctgctggcccaggcaaacagcccctta
aaccaaccgctgatcaactatacgcaggttgggattgctctcgccagccacctcctacaa
tacttatgggcgaataacagtagctttctgtttgcggagtttctcatgggacactgccag
tacgtgcagctccaggaatacgtgaggttgctgcagccttggtgtgaggttaatgtcggc
tcgcgaagatttgtgctgggccagtgttacctcgttacaggagaaggacacaaggctctc
gagtgtttctgcgatgctgctgcagcagtggacagagaggaattcctggacagattgatc
caagtggaggatgaggaagctgcctccaatccccgggtgcagtactacaataaggtactc
cgtttactggaagacatggcattgccagcactggtactgcagttggcagcaatcgcggtg
actgaggcaagggatgactggaagattttggctgcgctgtggacaaagattttcaagcac
cacttggacctgggccacaaccatcaggcttacgagtcactaacccagaacccagacagc
agcagacagctggactgcctgcgccagttggttgtggttctgtgtgagcgctcacagctt
caggatctggtagaattcccttacatcaaccttcatgatgaggttgttgggatcatcgag
tctcgtgctcgggctgtggatctcatgactcacaactactatgagctgttgtatgcattc
catgtccaacggcataactttcggaaagctggaacggtgatgtttgaatacggaatgcgt
ctggggcgagaggtccgctctttggatggactccgaaagcaagtcaactgttaccttgtc
gggataaactgcctgcgccaaatccggtcagagtatgcctggatagtgcggcctgtgtgt
ggagcgacgtacgaacgtcctggggcgtcccccaagaggagctatgatggggagctcacg
gccccacaggtctgccatcagattgatatagtggaactgaaggatttggagaaggagttt
gtgctggcccgtacccgcctactactcgcaaaacatgacccaggctcggcagcaatagca
ggcagtgcctctgctgaggagatggttgccttacttgttcaagtgggactctttgatgct
gctgtctccttgtgtcagaccttcagactctcactgaaccccatctttgaagggctgtcc
ttcaagtgcattaaactgcagctcatcggggaggctgcacagtctgacgcctgggactgg
ttgaaagccaatcaaattccttcgatcatcgctacaaaagaatccagtgccacagatgaa
gcctggagattgttgtcatcctaccttgatcgttaccagtctccaagttctcagtatcat
cgctgtgtgattaacaaactgctgtcacatggagtgccacttccgaactggctcattaac
agctataagaaagtggacgttgccgggctcctgcggctgtacctgaactatgaccttttg
gaggaagccgtcgagctggttttggaatacgttgatgcgttaatggggaaaggacctcag
tacttcaacatggagaggtccctctcagccacagctccaccggtttggctgccgtacaca
gctattgaccagttactgcaggcactcggagagaactcaggcaacctgagtaatgtgagg
ctgtgtgagaaactccggagcaggctggctgattatcaccagcaggtggatcagacaact
ctcgacatgaacagctaccgtcgccagcagcagcagcagcagttgttgtaa
DBGET
integrated database retrieval system
