Chiloscyllium plagiosum (whitespotted bambooshark): 122558254
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Entry
122558254 CDS
T08871
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03022
Basal transcription factors
cpla03420
Nucleotide excision repair
cpla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122558254 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
122558254 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122558254 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpla01001
]
122558254 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122558254 (cdk7)
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122558254 (cdk7)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122558254 (cdk7)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
122558254 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
122558254 (cdk7)
Protein kinases [BR:
cpla01001
]
Serine/threonine kinases: CMGC group
CDK family
122558254 (cdk7)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122558254 (cdk7)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122558254 (cdk7)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122558254 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
122558254
NCBI-ProteinID:
XP_043562572
LinkDB
All DBs
Position
2:29895766..29948813
Genome browser
AA seq
358 aa
AA seq
DB search
MAVHVRSRAKRYEKLDFLGEGQFATVYKAKDKNTDNIVAIKKIKVGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYMLM
TLQGLEYLHLHWILHRDMKPNNLLVDENGILKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRTPFLPGDSDLDQLTKIFEALGTPTEELWPGM
TSLPDYISFKSFPGTPLEHIFSAAGDDLLELLQDLFTFNPCARITATQALKKKYFSNRPG
PTAGPQLPQPNCSTEVLKEQEAKAGFKRKRTENMEQAFVLKFIQLLLQDFQHQLLFTS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcatgtccgttcccgggccaagcgctatgagaagctcgacttcctgggcgag
gggcagtttgccactgtatataaggcaaaagacaagaacacagacaacattgttgcaata
aagaagattaaagttggtcacagatctgaagctaaagatggtattaatagaacagccctt
cgagaaatcaagttgttgcaggaactcagtcacccaaatattataggactccttgatgca
tttggccataaatccaacatcagtcttgtttttgattttatggagaccgatttagaggta
ataataaaagataccagcctcgtgctgactcctgctaacataaaagcatatatgttaatg
acgctccagggtctagaatatcttcatttacactggattctacatagggatatgaagccc
aacaacttattagtggatgagaatggaattctcaaacttgctgattttggtttagccaag
tcatttggaagtcccaacagagtgtatactcatcaggtagtaacaaggtggtacagatca
ccagagttgttatttggagctagaatgtatggagttggagtagacatgtgggcagttggt
tgtatattagctgagctactacttaggacaccatttttacctggggactctgacctagat
cagctgactaaaatatttgaagctttgggcactccaacagaagaattgtggccaggaatg
accagccttccggactatatttcatttaagagttttcctggtactccactcgagcatata
tttagtgctgctggggatgacctactggaattgctgcaagacctgtttacatttaatccc
tgtgcaagaataacagctactcaggcgctgaagaagaagtattttagtaaccgccctgga
ccaacagcgggacctcaactgccccaacccaactgctcaacagaagtcttaaaagagcaa
gaggctaaggcaggtttcaaacgtaaacgaactgaaaacatggagcaagctttcgtcctg
aaatttattcaacttctcctccaggattttcaacatcagcttcttttcactagctga
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