Chiloscyllium plagiosum (whitespotted bambooshark): 122558297
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Entry
122558297 CDS
T08871
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122558297 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpla01007
]
122558297 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122558297 (kars1)
Enzymes [BR:
cpla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122558297 (kars1)
Amino acid related enzymes [BR:
cpla01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122558297 (kars1)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122558297 (kars1)
Prokaryotic type
Other AARSs
122558297 (kars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
122558297
NCBI-ProteinID:
XP_043562645
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All DBs
Position
17:27307845..27360691
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AA seq
609 aa
AA seq
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MMTSCLRRLLGLRVRGYLGKVPTHSLTSFTPLFQKRLHNEKSELKRRIKAEKKAAEKEIK
AKEQADKPIHEAKKVDGIDMSGDEETLDPNQYYKIRTQAIQRLKGTEDDPYPHKFHVDLS
LTEFIEKYNDLQPGDHLIDVILSVAGRIHAKRTSGVKLIFYDLRGEGVKLQVMANSKNYR
SEEEFIKVNNKLRRGDIIGVQGNPGKTKKGELSIIPVEIKLLSPCLHMLPHLHFGLRDKE
TRYRQRYLDLILNDYVRQKFINRAKIITYLRRFLDNLGFLEVETPMMNIIPGGAVAKPFI
THHNELDMDLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAY
ADYNDLMKITENLLSGMVKYITGSYKITYHPDGPDGQSYEIDFTPPFKRISLATDLEKIM
GVEFPPTDQYETEETRKFFDDLCNQKGVECPPPRSTARLLDKLVGEFLEVTCINPTFICD
HPQIMSPLAKWHRSFKGLTERFELFVMKKEICNAYTELNDPIKQRELFEDQAKAKAAGDD
EAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLFFPAMKPEDNKKEPAD
STENEHSAE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccagctgtctccgtaggcttcttgggctgcgggtcaggggttacttgggaaag
gtgccaacgcacagccttacttcctttactcctcttttccagaagagattgcataatgaa
aagagtgagctgaagagacgtataaaggcagagaaaaaagcggctgagaaggaaattaaa
gctaaagaacaagctgataaaccaattcatgaagccaagaaagttgatggaattgacatg
agtggagatgaagaaacccttgatcctaatcaatactacaaaattcgaacacaggccatc
caacgactgaaggggaccgaggatgacccatatcctcataaattccatgttgatctatcc
ttaacagagtttattgagaaatacaacgatctacagcctggagaccatctcattgatgtt
attttatctgtggcaggtcgtatccatgctaagcggacctctggtgtcaaactaattttc
tatgatcttcgtggtgaaggagtcaaactacaagttatggccaattccaaaaattacaga
tctgaggaggaattcatcaaggtaaataataaattacgccgtggtgatattattggagtg
caaggaaacccaggaaagacaaagaaaggagagctgagcataatccctgtggaaataaaa
cttctatctccttgcctacacatgctgcctcacttgcactttggactccgagataaggaa
actagatatcgtcagagatatttggatctgattttaaatgattatgtgagacagaagttc
atcaacagggccaaaatcatcacctatctacggaggtttttagataatctgggatttctg
gaggtggagacacccatgatgaatataattccaggtggagcagttgccaagcccttcatt
acacaccataacgaattagatatggatttgtacatgcgaattgctccagaactttaccat
aagatgttggttgtaggaggtcttgatagagtgtatgaaattgggcgccagtttaggaac
gaaggaattgatcttactcacaatccagaatttaccacatgtgaattttacatggcttat
gcagattacaatgacctaatgaaaatcacagagaatcttctttcaggtatggtcaaatat
attacaggcagttacaaaatcacgtaccatcctgatggacctgatggtcaaagttatgaa
attgattttacaccaccattcaaacgtatcagtttggcaacagatctggagaaaattatg
ggagttgaatttccacccactgatcaatatgagactgaagagacccgtaaattcttcgat
gatttgtgcaatcagaaaggtgttgaatgtccacctccaaggtctacagccaggcttttg
gacaagttggtcggtgaattcctggaggttacttgtattaatccaacattcatctgcgat
caccctcagattatgagcccactggccaagtggcatcgttcctttaagggtttgacagag
cgctttgagctttttgttatgaaaaaggagatctgcaatgcttatacagaattaaatgat
cctattaaacaaagagagctgtttgaagatcaggcaaaggctaaagcagctggtgatgat
gaagccatgtttattgatgacaacttctgtacagctttggagtatggacttcctcctaca
gctggctggggcatgggaatagacaggcttaccatgttcctgactgattctaataatatc
aaggaagtcttgttcttcccagcaatgaaaccagaggacaacaaaaaggaacctgcagat
tcaactgaaaatgaacattcagcagaatag
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