Chiloscyllium plagiosum (whitespotted bambooshark): 122558399
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Entry
122558399 CDS
T08871
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04115
p53 signaling pathway
cpla04120
Ubiquitin mediated proteolysis
cpla04137
Mitophagy - animal
cpla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122558399 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122558399 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122558399 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
122558399 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122558399 (siah1)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122558399 (siah1)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122558399 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
122558399
NCBI-ProteinID:
XP_043562861
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All DBs
Position
17:complement(40156819..40173270)
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AA seq
282 aa
AA seq
DB search
MSRQTATTLPTGTSKCTPAQRVPALAGTTASNSDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcagactgccacaacactccctactggtacatcaaaatgcactcctgcccaa
agagtcccagcattggcaggaactacagcctccaatagtgacttagcaagtctttttgag
tgtccagtctgctttgactatgtactgccaccaattcttcagtgccagagtggccatctt
gtctgcagtaactgccgtcctaagcttacatgttgtcccacttgccggggcccattgggt
tccattcgcaatttggcgatggaaaaagtggccaactctgtactgtttccttgtaaatat
gcctcttcaggttgtgagataacactgccacatacagagaaagcagaccatgaggaactc
tgtgagttcaggccatactcatgtccttgccctggtgcttcttgtaaatggcagggttct
ctggatgctgtaatgccacatctgatgcatcaacacaagtccattacaaccttacagggt
gaggacatagttttcctggccacagacattaaccttccaggtgcagtagattgggttatg
atgcagtcatgttttggctttcatttcatgttggtcttagaaaaacaggaaaagtatgat
ggccaccaacaattttttgccatagtacaactaattggaacacgcaagcaagctgaaaac
tttgcctatagacttgaactcaatggccacagacgacgcctgacttgggaagcaactcct
cgctccattcacgagggaattgctacagcaattatgaacagtgactgtctggtatttgac
actagcattgcacagctttttgcagaaaatggaaacttgggaattaatgttacgatctcg
atgtgttga
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