Chiloscyllium plagiosum (whitespotted bambooshark): 122558417
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Entry
122558417 CDS
T08871
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04217
Necroptosis
cpla04622
RIG-I-like receptor signaling pathway
cpla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122558417 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122558417 (cylda)
04625 C-type lectin receptor signaling pathway
122558417 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122558417 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122558417 (cylda)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122558417 (cylda)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C67
122558417 (cylda)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122558417 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
122558417
NCBI-ProteinID:
XP_043562902
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All DBs
Position
17:43003225..43068963
Genome browser
AA seq
950 aa
AA seq
DB search
MLNSATWNKEKSSVMLRDEPKYYLVAQECNAINKHTQMPLRLVRGSILMLQDRGPQLPNI
HSNKNKRGVVTVQCLEQPYNIIHVEEKDLQEIEGRVAELLFAVSTPEERHALSKNKPKLQ
EALQIDYNSNVKVQLRAGGEKLPGIIRFKGSLLQNKLLCELCFGVELLEEGRGQGYTDGS
YKGKQLFRCDDDCGVFVPFDKLELVEEEDDTDLKSGNTEMFLYSDKSAIEINSRVSTMID
DEVVYGTVVFCGLLSGKEDYGYFLGVDMDNVLGDWDGTWEGKVLYNTSHGKISLLWIEDV
QLDTSETRPLKQNFASRGINEKISSNVSSRSKNKGIVSQSGKSPGHNRNRSELRCMLNGA
STDPQKSKSTWYIDEGSEDTVTSLVDAHSKLSQSPPTTSSLQASLSNENKFHSLPFSLTK
KPNVNGSIGHTLSLSVQSVMMDMNPGANQDAEPGGVSMIEQPSLEIGSLVQVKENHPLYG
VIRWIGQPLGVNEQIAGLELEEENVGCTDGTFKGVRYFMCASKKALFVKLKSCRPDSRFV
SLSHHSNQIERCNSIAFGGYRSEVVKENTPPKMEKEGLAIMVGKKKGIQGHYNSCYLDST
LFCMFAFSSVLDTVLLRPKEKDDVEFYTETQDLLRTEIVNPLRNHGYVCATKIMKLRRIL
EKVEAASGFTSEEKDPEEFLNILFHHILKVEPLLKIRSAGQKVQDCFFYQIFMDKNENVG
VPTIQQLLEWSFITSDLKFAEAPSCLIIQMPRFGKDFKLFNKIFPSLELDITDLLEDTPR
DCRICGGLALYECKECYEDIDITAGKIKQFCKACTTQVHLHPKRQGHEQRKVSLPEQMAD
YAWRQCCVPRQKMKLFAVLCIETSHYVAFVKYGPDDSAWLFFDSMADRDGGQNGYNIPQV
TQCPEIGEYLKMSPEELHGLDPKSIQGFARRLLCDAYMCMYQSPIMSLYK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattctgctacatggaacaaagagaaatccagcgtgatgcttcgggatgaacct
aagtattatttggttgctcaagagtgtaatgcaattaataaacatactcaaatgccatta
agactagtaagaggcagcatattaatgcttcaggatcgtggtcctcaactaccaaacatt
catagtaacaaaaataaaagaggggttgttactgtgcaatgcttagaacagccatataac
atcatacatgttgaagaaaaagatttgcaagaaattgagggaagagtggctgaactactt
tttgctgtttcaacccctgaggagaggcatgctctgtccaaaaacaagccaaaactgcag
gaagcactccaaatcgattacaattcaaacgttaaagttcagctgagggctggaggagaa
aaactgcctggtattatacgattcaagggatcgttgttacagaacaagttgctatgtgaa
ttgtgttttggagtggaattactggaagaaggcaggggtcaaggctatacagatggctcg
tacaaaggaaagcaactctttcgctgcgatgatgattgtggagtttttgttccttttgac
aaactagaacttgttgaagaggaagatgacactgatctcaaatctggcaatactgaaatg
tttttgtatagtgacaagtctgccatagaaattaactcgagggtgtctaccatgattgac
gatgaagttgtgtatggaacagtcgtattctgtggcctgctgtcaggaaaagaagactat
ggctattttctaggtgttgatatggataacgtcttaggtgattgggatggcacatgggaa
ggaaaagtgctgtacaatacttcacacggaaagatctcccttctgtggatagaagatgta
cagctagacacctcagaaacacggccactgaaacaaaactttgcatcgagaggtattaat
gaaaagatctcttcaaatgtcagcagcagatcaaagaataaaggaattgtttcacaatcg
ggaaaatctccagggcataataggaaccgatctgaattacgttgcatgttaaatggtgca
tctactgatccacaaaaatcaaaaagtacatggtatattgatgaaggaagtgaagataca
gtaacatcactagtagacgcacactccaagttgagtcagtcaccacccacaacgtcttct
cttcaagcttccctttcaaatgaaaacaaattccattcgttgcctttcagccttaccaag
aaacccaatgtaaatggaagcataggtcataccctttctttgtctgtccagtcggtaatg
atggatatgaatcctggtgcaaaccaagatgctgaaccaggaggagtatcaatgatagag
cagcccagtttggaaataggatcgttggtgcaagtgaaggaaaatcatcctctctatgga
gtaattcggtggattgggcaacctttaggagttaatgaacaaatagctggacttgaactt
gaagaagaaaacgtaggctgtacagatggtactttcaagggagtacgttactttatgtgt
gcttcgaagaaggctttatttgtcaaacttaaaagctgcaggcctgattcgagatttgta
tcattgtctcatcactccaatcaaattgaaagatgcaattcaattgcatttggaggatat
cgaagtgaagtggttaaagaaaatacacctccaaagatggaaaaagaaggcctagctata
atggttggaaagaaaaagggtattcaagggcattacaattcctgttatttagattccact
ttgttctgcatgtttgcttttagctctgtgttggacacagtattgcttaggccaaaagaa
aaagatgacgttgaattttatactgaaacccaagatttgttgcgaacagaaatagttaat
cctttgagaaatcatgggtatgtatgtgctactaaaataatgaaacttcgaagaattctt
gaaaaggttgaggcagcttcaggatttacttcagaagagaaagatccagaagaatttctc
aacatattgtttcatcacatattaaaggtagaacctttattgaaaatcagatcagctgga
caaaaagtacaagattgtttcttttaccaaatattcatggataaaaatgaaaatgttggt
gtaccaacaattcaacagttactggaatggtcctttattaccagtgaccttaaatttgct
gaggcaccttcatgtctaataattcaaatgcctcgatttggaaaagatttcaagttgttc
aataagatatttccatctttggaattggatatcacagatttattagaagacacacccaga
gattgccggatctgtggaggtcttgcactttatgaatgcaaagaatgttatgaagatatt
gatataactgctggaaaaatcaagcagttctgcaaagcttgtactactcaagtacatctc
catcctaagaggcaaggacatgaacagagaaaagtgtctctaccagaacagatggctgac
tatgcctggaggcagtgttgtgtacccagacagaagatgaaactgtttgctgtgctctgc
atagagactagtcactatgtggcttttgtcaaatatggcccagatgactcagcctggttg
ttttttgacagcatggctgatcgggacggtgggcagaatggctacaacatccctcaggtg
actcaatgtcctgaaataggagaatatttaaaaatgtcaccagaggaactacatggtttg
gatcctaaaagtatccaaggctttgcacgaagactgctgtgcgatgcatacatgtgcatg
taccagagcccaataatgagtttgtacaaatag
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