Chiloscyllium plagiosum (whitespotted bambooshark): 122558423
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Entry
122558423 CDS
T08871
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122558423 (chd9)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122558423 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
DEAD
Chromo_MIT1
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122558423
NCBI-ProteinID:
XP_043562909
LinkDB
All DBs
Position
17:45334086..45579568
Genome browser
AA seq
2677 aa
AA seq
DB search
MTDPIMDFLDDANLFGGGLEGLADDGFSQAGPVSLVDELNLSADFEPLQVEPLHHVSETP
TSEKINFEQLQTFDSLKLHPENQPFNLVGGGAETSVLSPHSQFHCSPDHQQNQTNGLFPS
ANNDNSGQSFVDGSPMWGHQSPISNQNGSPFHTLQAHSQSIQPMTPFLTHHDFGLHQSSP
QQQQQQQPASVQPQQNMNHFTTGQKVLNHGNQFMGAHSSASSHMTPLSQPTTTVSSSTQQ
HSASVQQFNQPTTALSMNAVHPVQFTNSANLTRVHQNVNFSNSSREMTPCSANSNQFTPP
YSYPSNNLANGNNLTSAAILSTHQVTQAMTCFPGSDAFTVAAGTNQEPVQHMLSPNSPAK
QKVLQPIHSVNTQGNFSSSSMPSVQTGVPITSSPASRVRLSNTSVQRKPTDLSALQGNPL
PHSQTHSLTRMNTNDFQGQLSTKFGSSGLGQRNSSPILRPAASRQLQQHPNKQQKMGNQQ
QMHQEPATISHTLSQHWQPSITSQHRQMKGSMQLTLQRQPPSSQTTIDSSRPQTAQIVKL
QNAQLMTGSKQLKKKEMQNKQEKANRIISEAIAKAKARGEQNIPRVVNPACLSTGSARKE
ERKSNKCKTKQKDKESKKSRTGLCSKPKDRTKINKIIITLGKKRKNESSEEGSDTEQIPT
PSIKKESISGCQKRRSNRQVKRKKYNEDTGMKISDDDDGLTTKGKVKTGAVLPAEQPVQL
FVENPSEEDAAIVDKVMASRLVKKEVAMGHMADVEEFFVKYKNYSYLHCEWATEAQLMKD
KRIHQKVNRFKIKQAQRGHFFAAMDDEPFNPDYVEVDRILECSCCEDTDTGEAVVYYLVK
WCSLPYEDSTWELREDVDQGKIEEFERLQQAKPSLKHMDRPPATAWKKLGQSREYKIGNK
LRDYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLDEIFLTGIHGPFLIIAPLST
IANWEREFRTWTDLNVIVYHGSMISRQMIQQYEMYFRDSEGRILRGTYRFHAMITTFEMI
LGGCPELNVIEWRCVIIDEAHRLKNKNCKLLEGLKIMNLEHKVLLTGTPLQNTVEELFSL
LHFLEPLRFSSEATFMQEFGDLKSEAQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIE
VELTNIQKKYYRAILERNFAFLSKGAGQANVPNLINTMMELRKCCNHPYLIKGAEEKILG
EFREMHNPVDPVFHLQAMIQSSGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLI
QKRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSD
WNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMNGREN
NVGGMQQMSKKEIEDLLRRGAYGAIMDEEDESSKFCEEDIDQILMRRTKTITIESEGRGS
TFAKASFVASGNRSDIALDDPNFWQKWAKKAEIDLEAIHGRNSLVIDTPRVRKQTRPYNA
AKDELAELSEAESDGEDRPKLRRPYDRCHAYGRTECFRIEKNLLIYGWDRWKDILSHGRF
KRRLVEQDVETICRALLVYCLAHYRGDEKIKSFIWDLITPTEDGQTKELQNHLGLSAPVP
RGRKGKKVKIQGSSFDMQKAEWLRKYNPEHLLQDDGYKKHLKHHCNKVLLRVRMLYYLKQ
EVIGDQLEKVLDGVDASEIDIWVPEPEQSEIPAEWWDMDADKSLLIGVFKHGYEKYNTMR
NDPALCFLERVGKPDEKAIAAEQRGNDTFADGAEGDGEDPEYKPTQPLFKDEMEDAASSP
GDLIITDCPLGEGDLLYWPTASALTTRLRRLVTAYQRSNKREQVKLEAQTKGDRRRRLCA
DTVKAKEAAKIEKQQRWTRREEADFYRVVSTFGVVYDPDKQKFDWTKFRAIARLNKKTDE
SLQKYLYAFIAMCRRVCRLPPKEKEELLDPPIFIQPITEERASRTLYRIELLRKVREQVL
RHPQLDERLQLCQPGPDLPEWWESGKHDKELLTGAAKHGVSKTDYHIFCDSELSFMMAQR
NFSQNKVTQSRSSTPLLHPQYPSSASPLNLPAKLQDKKSQPETETAKCERTIVVKKEQSS
DDEDAMRAEVKNKVKSEHWNSVGGFQLQNRLEKKTGIKLDPDPDGCMVAARTQPLTPNSV
HNKRKANRGRSDSSSDSDSDSDNSSSSSPSSSSSSSSSQSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSDDSDSDSDDKQTTAGCKPPQHLKTYDEDSVASLSITHDETQDSFLPDSG
KPDGPFLQERHRFAASCWPKDRVMINRIDSICHAVLKGNWIPSRRSYDYNAVTSSYTTKL
LDSPSAMGNFSDSATVTLGSQGAKEDNSLLSQFTKVKKHVREKEFTVKINDEGGLKLTFQ
KQRLSQKRGLEAEEGTSDQQQYMARLHDLYSASDSSQELAVDLSKSLRGAGSSNSLPPLV
LFNSSLPGNTSTVISDPKSALAGTSQQISRHCTNGVLLDGQPIVKKRRGRKKNVEGMDIL
FMNRSKSVQPANVELTNAEAALGVSQGQLDVDSPVSVINVKNGTRLTGEDAPKRRDLEEW
LKEHPDYVADVSSHVPKIVKTEILADRPKQKRHRCRNPNKIDVKSLTGDERVPVINRRNA
KKVTLLLYMAKQFYEFVTARHVSFVTNCQYLLITIGD
NT seq
8034 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcccatcatggattttttggatgatgccaatttgtttggtggaggattggaa
ggcttggcagatgatggcttttcacaagcaggaccagtttcattggttgatgagctaaac
ctaagtgcagattttgaacctttgcaggttgagccattgcatcatgtatccgagacaccg
acatcagaaaaaattaactttgaacagttacagacattcgattcactgaaacttcatcca
gagaatcagccatttaacttggtgggcggtggtgctgagactagtgtcctttccccacat
tcccagtttcattgttcaccagaccatcagcaaaatcagacaaatgggctattcccttct
gccaataatgataatagtggccagtcattcgtagatggcagcccaatgtggggccaccaa
agccctatttcaaatcagaatggatcaccattccataccttgcaagcacattcacagtcc
attcagccaatgacccccttcttaacgcatcatgattttggtctgcatcagtctagccca
cagcaacagcagcagcaacaacctgcatcagtgcagccccaacagaatatgaatcatttc
actacaggtcagaaagttctaaatcatggcaatcagttcatgggtgcccacagttcggct
tcatctcatatgactccgttgagccaaccgaccacaactgtaagttcatctactcaacaa
cattctgcttcagtgcagcagtttaaccaaccaactacagctctgtccatgaatgcagtg
catcctgtgcaattcaccaatagtgctaatctcactcgtgtacatcagaatgtgaacttt
tcaaactcatcacgagaaatgactccgtgttctgctaattcaaatcagtttactcctccg
tattcctacccgagtaacaacctagctaatggcaacaatttgacatctgctgcaatcctt
tcaactcatcaggtaacccaggctatgacttgcttccctgggagtgacgcattcacagtg
gcagcagggaccaaccaagaaccagttcaacatatgctcagtcccaacagtcctgcgaaa
caaaaggttctccagcctatacattctgtaaacactcagggaaacttcagttcttcaagt
atgccctctgttcaaactggcgtgccaataacaagcagtcctgcttctcgggtgagactt
tctaacacatccgttcaaaggaaaccaacggacctttcagctcttcagggaaatccactt
ccacattctcagacacattcgttgaccaggatgaatacaaatgattttcaggggcagctg
tcaacaaagtttggcagttcaggtcttggccaaaggaattcatcccctattttaagacca
gcggcttcacggcagttacagcagcatccaaacaagcaacagaaaatggggaaccaacag
caaatgcatcaagagcctgctaccatcagtcacacactatctcaacattggcaaccatca
ataactagccagcatcggcagatgaaggggtccatgcagttgactttgcaacggcagccc
ccttcctctcagaccaccattgatagttctcgtccacaaacagcacaaattgtcaaatta
cagaatgcacagctgatgactggaagcaaacaactaaaaaagaaggaaatgcagaacaag
caagaaaaagctaatcgcatcatatcggaagcaattgctaaggcaaaggcacgtggggag
cagaatattccccgagtggtaaacccagcctgtttatccactgggtctgctcgaaaggag
gagaggaaatctaacaagtgcaaaacgaaacaaaaagataaagagtcaaaaaaatctaga
actggtttatgttctaaaccaaaggatagaacaaaaataaacaaaatcataataacactt
gggaaaaaaaggaagaatgaatcgtcagaagagggctcagataccgaacagattcccaca
ccatcgatcaagaaagaatccatttctggatgtcaaaagagacgatcgaacagacaagtg
aaaagaaagaaatataacgaagacactggaatgaagatttcagatgatgatgatggctta
actactaaaggaaaagtcaagactggtgctgttctacctgctgaacaacctgtgcaatta
tttgtggaaaatcctagtgaagaagatgctgcaattgtagacaaagttatggcttcaaga
ttagtgaaaaaggaggtagcaatgggacatatggctgatgttgaggagttctttgtgaaa
tacaaaaattactcatacctgcattgtgaatgggccacagaagcacagttaatgaaagac
aaaaggatacatcaaaaagtgaaccgcttcaagattaaacaggcacagagaggccatttc
tttgcagctatggatgatgagccttttaatccagactatgttgaagtggacagaatattg
gaatgctcgtgttgtgaggacacagatactggtgaggctgttgtttattatttggttaaa
tggtgctcattgccatatgaggatagtacctgggagcttagagaagatgtagatcaaggc
aagattgaagagtttgaacgactgcagcaagcaaagccttccctgaaacacatggaccgt
cctcccgccactgcttggaagaagcttggacaatccagggaatacaagattggtaataaa
ctcagggactaccaattagaaggtgtcaattggctccttttcaactggtataacaggcaa
aactgcattcttgctgatgaaatgggtttaggcaagaccatccagtctattacattcctt
gatgaaatttttctgactggaatccatggtccttttctcatcattgcgcctttgtctaca
attgcaaactgggaaagagaatttcgcacgtggacagacctgaacgtcatcgtttatcat
ggcagtatgattagcaggcagatgattcaacagtatgaaatgtatttccgggactcagag
ggccggattcttcggggaacctacaggttccatgccatgataactacatttgagatgatc
ctgggtggttgtccggagctaaatgtaattgaatggcgatgtgtcattattgatgaggct
cacagactgaagaataaaaattgcaagctactggagggattgaaaattatgaatctggaa
cacaaggtcctgctgacagggactccactgcagaacactgtggaggaattgtttagtttg
cttcatttcttggagcccctacgtttctcatcagaagccaccttcatgcaggaatttgga
gacctaaaaagtgaagcacaggtgcagaagcttcaggcaatactgaagccaatgatgctg
cgacgtctgaaggaggatgtagaaaagaagcttgctccaaaagaagagacaattattgaa
gtagaattaaccaatattcagaagaaatactatcgtgcaatcctggaacgaaactttgct
tttctgtccaaaggagctggtcaggcaaatgttcctaacctgataaacacgatgatggaa
ctcaggaaatgctgtaatcacccatatctgataaaaggtgctgaagaaaagattctggga
gagttcagagagatgcacaatccagttgatccagtcttccatctgcaagctatgattcag
tcatctggtaaacttgtcttaattgacaagctgctcccaaagatgaaagctggtggtcac
aaagttctcatcttctcccagatggtgcgctgccttgacatacttgaggactatcttatt
caaaaaaggtatccgtatgagcgtattgacgggagagttcgaggaaatttacgacaagca
gcaattgaccgatttagcaagcctgactctgaccgctttgtgttcttactgtgtacaaga
gctggtggattaggcattaatctaacagcagcagatacttgtatcatattcgattcagac
tggaatccacagaatgacctccaggctcaagctcgatgtcacaggattggtcagaacaaa
gctgtaaaagtttacagactaataactcggaattcgtatgaacgggagatgtttgacaag
gcgagtctgaagttgggtcttgacaaagctgtgctgcagagtatgaatggacgggaaaac
aatgttggtgggatgcagcaaatgtccaagaaagaaattgaagacttgcttcgtcgcggt
gcctatggtgcgataatggatgaagaagatgagagttctaaattttgtgaggaggacatt
gatcagattctcatgcgacgcacaaagacaattactatagaatcagaaggaagaggttcc
acatttgcaaaggcaagttttgttgcatcaggcaacagaagtgacattgctttggatgat
cctaacttctggcagaaatgggcaaagaaagctgaaattgatctcgaagccatacatgga
aggaacagcttagttattgacacaccaagagtaaggaaacaaaccagaccttacaatgct
gctaaagatgagctggcagaattatcagaagcagagagtgatggggaagatagaccaaag
ctacgcaggccctatgaccgatgtcatgcatatggaagaacagagtgctttagaattgag
aagaatctgctaatttacgggtgggatcgctggaaagacattctatcacatgggcggttt
aagagacggctggtggaacaggatgtggagacaatctgtcgtgcactcttagtatattgc
cttgctcactacagaggagatgaaaagatcaagagtttcatctgggacctcattactcca
acagaggatggccagacaaaggaactgcaaaaccacctagggttgtctgcaccagttcca
agaggcaggaaagggaagaaggtgaagatacaaggaagctcatttgatatgcagaaggct
gagtggctcaggaaatataacccagaacacctgctccaagatgatggctacaaaaagcat
ttaaaacatcactgcaataaggtactgctgcgagtaagaatgttgtactatctgaagcaa
gaagtaatcggtgaccagttggaaaaagtacttgatggagtggatgcaagtgaaattgac
atttgggttcctgagcctgagcagtctgaaatacctgctgaatggtgggacatggatgct
gacaaatcgctgctcatcggagtcttcaagcacggttatgaaaaatataatacaatgaga
aatgaccctgcactctgtttcttagaaagagttggcaaacctgatgagaaagccattgca
gcagagcagaggggaaatgatacttttgcagacggtgcagagggggatggtgaagatcca
gaatataaaccaactcagccattattcaaggatgaaatggaggatgctgcatcttctcca
ggagatctaataattacagattgccctctgggagaaggtgatctactctattggccaact
gcatcagctttaactacgcgccttcgtcgacttgtaactgcttatcagcgtagtaacaag
agagagcaggttaaactggaagcccaaactaaaggagatagaagaaggcgactttgtgct
gacactgtaaaagccaaggaggctgctaaaatcgagaagcaacaaaggtggactaggcga
gaagaggctgatttttacagagtcgtgtctacttttggtgtcgtttatgatccagacaag
caaaaatttgattggactaaattccgagctattgctaggttgaataaaaagacagatgag
agtctacagaaatacctttatgctttcatcgctatgtgtcgaagagtttgccgtttacca
cccaaagagaaagaagagcttcttgatccacccattttcatacagcctattacggaggag
cgtgcttccaggacattatatcggattgagctgctccgtaaagtgcgggaacaagtactt
cgacatcctcagcttgatgaacggttacagttgtgccaaccaggcccagatctgccagag
tggtgggagagtggaaagcatgataaggaattgctcactggagcagccaaacatggtgtc
agcaagactgattatcacattttctgtgattcagagctttcctttatgatggctcaaaga
aacttcagccagaacaaagttacacaatctaggagctccacaccactcttgcaccctcag
tatccatcttcagcctcacctcttaatttaccagctaagctgcaagataaaaaaagtcaa
cctgagactgaaactgcaaagtgcgaaagaacaatagttgtaaaaaaggaacagtcatct
gatgatgaagatgcaatgcgcgctgaggttaaaaataaagtgaaatcagaacactggaat
tctgtgggtggttttcagctacaaaacagattagaaaagaagactggcattaaactggac
ccagatccagatggatgtatggttgcagcaaggactcaaccccttacaccaaactctgta
cacaacaaacggaaagcgaacagaggacgttctgattcgagttccgattcagactctgat
tcagacaattcttcttcttcttcaccgtcgtcgtcatcatcgtcgtcatcatcacaatcc
tcatcttcctcctcctcttcgtcgtcgtcatcctcttcgtcctcatcatcctcttcatct
tcctcctcctcctcctcttcatcgtcctcttctgatgatagtgatagtgacagtgatgat
aagcaaaccacggcaggttgcaaacccccacagcacttgaaaacttacgatgaagacagt
gtagcatctcttagcatcacacatgatgagacacaagacagctttctgccagatagtgga
aagcctgacggtcccttcctccaagaaaggcataggtttgctgcctcctgctggccaaag
gatcgtgtcatgatcaacagaattgatagtatatgccatgcagtgttgaaaggaaattgg
attccatcaagaagaagttatgattacaacgctgtgacctcttcttacacaacaaaactg
ctggatagcccttctgccatgggaaatttcagtgattctgctactgtaacattgggaagc
cagggtgctaaagaagataattctctcttgtcgcagttcacaaaggtgaagaagcatgtg
cgagaaaaggagtttacagtgaaaatcaatgacgaaggtggattgaagttaacttttcag
aaacaaagactcagtcagaaaagaggacttgaggctgaagaaggaacttcggatcagcaa
caatacatggcacggttgcatgatttgtattctgcttctgacagcagccaggaattggct
gtggacctttccaaatctttacggggagctgggagctccaactctttgccaccgttggta
ttattcaattccagtttgcctggcaacacctccacagtgatctcagatcccaaatcagca
ttagcaggtacttcacagcagatctcaagacactgtacaaatggggtcctattggacggc
cagccaattgttaaaaagagaagaggacggaaaaaaaatgtggaaggaatggacatcctc
ttcatgaaccgaagcaaatcagtacaacctgctaatgttgagttaaccaatgcagaggca
gctctcggtgtatctcaagggcaacttgatgttgatagtcctgtttcagttattaatgtg
aaaaatggcacaagactcacaggagaggatgctccaaaaagaagggatttagaagagtgg
ctcaaggagcatccagactatgtggcggatgtgtcatcgcacgttccaaaaattgttaaa
actgaaattttggctgatagaccaaagcaaaaaagacatcgatgcagaaaccctaacaaa
atagatgtcaaaagtctgactggagacgaacgtgtacctgttataaatagaagaaatgcc
aaaaaggtgactcttttattatacatggcaaaacagttttatgaatttgtaactgcaaga
catgtttcttttgtaacaaactgtcaatatctccttatcaccattggagattag
DBGET
integrated database retrieval system
