Chiloscyllium plagiosum (whitespotted bambooshark): 122558540
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Entry
122558540 CDS
T08871
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122558540 (rfwd3)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122558540 (rfwd3)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122558540 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4_2
Beta-prop_THOC3
Beta-prop_WDR5
zf-C3HC4
zf-RING_UBOX
WD40_CDC20-Fz
WD40
zf-RING_Vps41
Beta-prop_EML_2
EIF3I
zf-C3HC4_3
zf-RING_5
zf-rbx1
Beta-prop_WDR3_1st
WDR55
zf-RING_11
zf-C3HC4_4
zf-ANAPC11
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WD40_2
WD40_Prp19
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Rtf2
Myo5a
CFAP43_N
zf-UDP
Prok-RING_4
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
zf-RING_4
Phage_TTP_15
zf-Nse
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
122558540
NCBI-ProteinID:
XP_043563174
LinkDB
All DBs
Position
17:complement(59637732..59675188)
Genome browser
AA seq
736 aa
AA seq
DB search
MAQQVVDVDMQPEEEAVPAQLNFRDPALMPTGEGPSTAPLGEELRALSGTEAPSTAHSGG
LEAALLTEELQRLQGALRTVAQHFSLGQRPGHQRRQLRRNGRRQPGTSVSQRSSSSRSGA
LDNYFRVNRQQHTESVRLAVEYGDEVSSEDSSTDLSTDLSESEESGSTTEIEDEYEGDES
AAASSAPASAPTVVNPTPAQGVEAGDSQSVHQEQDSMTLHSEDSLNVKEDTACAKGTKPA
FDDEGNTCSICFEPWTNAGEHRLVTLRCGHLFGYTCIDRWLRKQGGKCPQCNKKAKRSDV
VVLYAPTLKAVDTSEQERLKSDLEKEQMMRRKAELESAQCRLQLQFLTEECSKLRKQLQE
LRCLIAKHGPSASQGSASSSNSLTGNIISSQSQSKYQFEKGIIVSQSGNCRVMAYSSLMT
CLVVSQPSPQTTLLPGCGVKKISGMNFRSTQYIPIHSKQIRGLAFSDRPDSVLLSASLDN
TVKLTSLMANTVVQTYNTGRPVWSCCWCSDDTNYIYAGLINGSILIYDMRDTTTHVQELP
SQGSRCPVTSLSYLPRMASAAFPCGGLVAGTLEGGCFWEQKSTNTYKAHLLPLEAGSCTD
IQIEPTMRHCLVTYRPGKTHNSLRCVMMELSSSPSPDSLENLICTCYPVQTFNAGPTCKL
LTKNAIFASPEKDGSVLVCAGDEASNSAMVWNAGNGSLIQKLQADQPVLDICPFEVNHMN
FLGTLTEKMVKIYKWA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaagtggtcgatgtggatatgcagccagaggaggaagctgttccagcacaa
ttgaatttccgtgacccagctttgatgccgacaggggagggcccaagtactgcccccctt
ggtgaagaattaagagcgctgtctggaactgaagccccttcaactgctcacagtggtgga
ctggaagcagcattactcactgaggaacttcaaagactgcaaggggcactgagaactgta
gcacagcacttttccctcgggcaaagacctggtcaccagcgccggcagttgaggaggaat
ggtcgccgtcagccgggaacaagcgtttctcagagatcttcgtcatccaggtctggagct
cttgacaactacttccgtgttaacaggcagcagcacacagaatctgtcaggttagcagtt
gaatatggagatgaggtgagcagtgaagattcgagtaccgatctgagcactgatctcagt
gagtcggaggagagtggcagcaccacagaaatagaggatgaatatgagggtgatgagtct
gcagcagcttcatcagctcctgctagtgccccaactgtggttaatcccacaccagctcaa
ggtgtcgaggctggagattcacaatctgtacatcaagagcaggacagtatgaccttacat
tcagaagacagcttaaatgtgaaggaagacacagcatgtgccaaaggcaccaagccagcc
tttgatgatgaagggaatacgtgctcaatctgttttgagccatggacgaatgcaggagag
caccgtcttgtcacactgcggtgtggtcacctctttggctatacctgcattgaccggtgg
ctgaggaaacaaggaggaaaatgtccacagtgtaataagaaggctaagcggtcggatgta
gtggtgctgtatgctccaacattgaaagctgtggataccagtgagcaagaacgattgaag
agtgatctggagaaggagcagatgatgcgtcggaaagcagagttggaatctgctcagtgt
cgcctccaactacagttcttgacagaagagtgcagcaagttacgtaaacagttgcaggag
ctgagatgtctgattgctaaacatggtccaagtgcttctcaaggttctgctagttccagt
aattccctaacaggcaatatcatttccagtcaaagtcagtccaagtaccagtttgagaaa
ggtatcattgtttcacagagtgggaactgtcgagtcatggcatactcctccttgatgacc
tgtcttgttgtgtctcaaccttctcctcagacaactctcctacctggatgtggtgtgaag
aagataagtgggatgaacttccgcagcactcaatacatccccatccattctaaacagatc
cgaggtctggcattcagtgaccgccctgacagtgtcctcctttctgcatctctggacaac
actgtcaaattaaccagcctgatggccaacactgtggttcagacttacaacactggtcgt
cctgtctggagctgctgctggtgttcagatgacacaaactacatctatgctgggttgata
aatggttccattttgatatatgacatgagggatacgacaacccatgtccaggagctgcca
tcacagggctctagatgtcctgtgacttcactgtcctatctcccacgtatggcttctgca
gcgtttccatgtggtggtctggtggctggcactctggaaggcggctgcttctgggagcag
aaatccacaaacacttacaaagcgcacttgctgcccctggaagctggaagctgcacagat
atacagattgaacccacaatgcgacactgtctcgttacttacaggccaggcaaaacccat
aattccctacggtgtgttatgatggaactatcaagcagtccctctccagattcgctggag
aacctgatttgtacatgttacccagtccagacattcaatgcgggccctacatgtaagctg
cttactaaaaatgccatttttgcaagtcccgagaaggacggcagtgtcttagtgtgtgct
ggggatgaggcatccaacagtgctatggtatggaatgcagggaacggatcactcatccag
aagcttcaggctgaccagcctgtcctagacatctgtccctttgaagtgaatcacatgaat
ttcttggggactctgacagaaaaaatggttaagatctacaagtgggcctga
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integrated database retrieval system
