Chiloscyllium plagiosum (whitespotted bambooshark): 122558565
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Entry
122558565 CDS
T08871
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122558565 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122558565 (nudt21)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
122558565 (nudt21)
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
122558565
NCBI-ProteinID:
XP_043563240
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Position
17:61479035..61496410
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AA seq
226 aa
AA seq
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MSVVPPSRSQAGWPRGVSQYGNKYLQAKPLTLERTINLYPLTNYTFGTKEPLYEKDCSVA
ARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGL
KRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQE
KALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggttccgccgagccgctcgcaggcgggctggccccgcggagtctcccaatat
gggaataagtacctgcaggcgaagccgcttaccctggagaggaccattaatctgtatcca
ctgactaactacacctttggtaccaaagaacctttgtatgagaaggattgctctgtggca
gccagatttcaacgcatgcgggaggagtttgagaagattggcatgaggcgcactgtagaa
ggtgttctgattgtacatgagcacagacttccacatgtattactattacaactggggaca
accttcttcaaactacctggtggagaactgaatcctggagaagatgaggtggagggtctg
aagcgtctaatgacagagatcttgggtcgtcaagatggtgtccagcaagactgggtaatc
gatgactgtattggcaactggtggagacccaattttgagcccccccagtatccctacatt
ccagctcacatcaccaaacccaaagagcacaagaaactcttcttagtgcaacttcaagag
aaagccctgtttgcggtaccgaagaattataaattggttgctgcaccattatttgagctt
tatgacaatgctccaggttatggacccataatctccagtcttcctcagcttttgagcagg
tttaattttatttataactga
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