Chiloscyllium plagiosum (whitespotted bambooshark): 122558587
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Entry
122558587 CDS
T08871
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122558587 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122558587 (exosc6)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122558587 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
122558587
NCBI-ProteinID:
XP_043563295
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Position
17:66729809..66739020
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AA seq
282 aa
AA seq
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MPVDTKRVRGPEESQSPLLFVAGDAGPSSVPGKAGSLGRARARADGRSAAEPRPVFARAG
LVSQADGSVYAECGLSKLLCAVYGPRESDRKEERRLSGATLGCEFRFAPFSCKKRAAWIQ
GNLEKEYSLIMEQSLQPAICLHKYPRSQIEVYVMVLENDGSTLAAALTCASIALAEAGIE
MFDMVVGCSLRQCGDDSLLDPTAAEEYSAASSQAVNNGSLTVALLPTLNQISGLVSKGEW
EEQTSVEAIKACIEGCQKLYSVVQQCLTKSVKRKIPQLVSKD
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggacacgaagcgagtgcggggcccggaggaatcgcagtcgccgctgctgttt
gtggcgggcgatgcaggtccgagctcggtgccggggaaggcggggtccctgggccgggcc
cgggcccgggccgacgggcggtcagccgcggagccgaggccggtgtttgctcgggccggc
ctggtgagtcaggcggacgggtcggtgtacgccgagtgcggcctcagtaagctgctgtgc
gccgtgtacgggccccgggagagcgacaggaaggaggagcggcgactgagcggagccacc
ctgggctgcgagttcagatttgctccgttctcctgcaagaagagagctgcctggattcag
ggcaacttggagaaggagtattcgttgatcatggagcagagcttgcagccagctatctgt
cttcacaagtaccccaggtcccagattgaagtgtatgtgatggttctggagaatgacggc
tccaccttggcagctgctttgacttgtgcttccattgcactggcagaagcaggcatcgag
atgttcgacatggtagtgggctgctccttgcggcagtgtggagatgactccctccttgac
ccaacagctgctgaggagtacagtgcagccagctcgcaggcagtaaataatggcagcttg
actgtggctctgctgcccacactcaatcaaatctctgggctggtctccaaaggagagtgg
gaggagcagacatcagtagaagcaatcaaggcttgcattgaggggtgtcagaaactgtac
tccgtagtccagcagtgtctaaccaaatcagttaagaggaaaatcccacagcttgtcagt
aaagattag
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