Chiloscyllium plagiosum (whitespotted bambooshark): 122558731
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Entry
122558731 CDS
T08871
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122558731 (tdrd12)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
122558731 (tdrd12)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122558731 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
ARM_ARMC5
CS
Motif
Other DBs
NCBI-GeneID:
122558731
NCBI-ProteinID:
XP_043563458
LinkDB
All DBs
Position
17:complement(34025233..34170864)
Genome browser
AA seq
1758 aa
AA seq
DB search
MFEIFIIKVEDPSCFWGRITNGFSDLVENANQYQRLEEKMNQVYNRRDEDSEEIKLAVLE
QGQICAIYCHELRCWCRAILESLVSSGSSYLAECFLVDYAKHILVKANDVRRAVDVFWKL
PYRAKKFTLFGIQPMTLHVDVCEEKAKIGPAVRWDSAAIQYFQKMSRESDVAEAKLQSVT
GDTFAVQLYLSLNDEKVCLNDDLVAKFFACYVSPKSMVKSLNSSSEITSALCQKKEAPVK
KNVGHAALALWSETVQGNVRTTLNQGPAVQKLVTQCLQSQERVFSENINKQYTKTAVSLS
NRKSTESLASFSFCSSEKELDCKRARFYPRDEMRMDRDTSKAMQECDEIPAARSYVFIPF
IIKLLQFLNPDPLNSKNELELNFQQPSYKMAFDLCNGVLVHSLIKLRPCRSMEMSPISLD
LKKELCKKKIVRPNVVQAYCWPAIGRGCDLIAVSQKGDDPLLYLPPLLTFLQLPSMYNYQ
PRRNLPLAIIVCPGRQKAHFVYQMLTDLIRTSRPLSLSLVLVGQDPEEIKKIKFTKGCDV
VVTTPHSLVRVLQIHCLFFIRLSHLVLDRVDVLFDEAMDEMNTILQCFKEATNVPERGST
PQQLIAVGQLWSKKMESLLKENRSDPYVVITAMEEAALYGNVHQVVKVCLDCEKTSFLLT
MLDFTSEILQKTVIFANCTEEVDHVFKALGSNSHFCMKVHEGMSLQVNNIMDDWSKKFNP
GTHVILVTTDNCLRVLRITDATCVIHYGFPSSCEIFGTRLCCMVDNFDNLTMEGPTRQGQ
SVVLLTEKDALQTVSVLHYLERTEAKIPQELFQFILNMNNLDDIYYDRALCKYLKAYGIC
RDNKTCPSRHKFLHDVDKPRYLTAEKKLPSTGYIEIIPTCVNDASGYYGRIIHHRSKWED
LPVSMEEDYLMLLKDMTDYYLEDDHRKPVEQLEVSAFYGLEENSYSRVQLLALPEKAESA
VLRSARVKYIDSGQTGLVMQKQLLKLPAKFQVLPPQVVEFIICRVKPIDNEMDWNPQVSR
YIKQKITNKSHEAKIVLALGNTLWLNPVVRMAKLADLKTTILEYNIRSQIMNSGFGTDNA
EHIERLKGLCRVAGLGLPNEDSPLKQLHYDNKLEHVTLQNDGNYHSVVISEFSSPKKFHV
QLVATREAFCAFENEINQKVMEKKTFIFNTSMPTVGDLCLAFCETEKRWHRVKILSIVDS
KRIYEVFFMDFGTCSYISLNNIQPLLKDALKLPFQAICCSLFGVEPMEKLCSQEIKEWSC
TSLQDKELQVKVIEQSRNDLTDTICYYVVVRDPSNAGSEKLAEQMLSKGQGIGPPAILNQ
LFSEEVVESKETSYISYLCSLVCALLGDQNSSSLRTTIVEELQNNVLQYSAESASESGLH
FLCRLLRFLTFPKEQADVIIAKAHLIRMQVRDLDEIKEEKGIYVLVNLLQGVTSAELQES
TCVALGILSENTDLRIPIIDANALKYFYQLLKMPIETNVWEAILGALDALLCSSRVCEEI
EQQEIICHPCAKIEQSSKDKVLENVLKVLCYLSGRPQSLNLNVLSGLVSTIDSLLVHKTS
KTALYKVANNLKSSLAILQTLHCPQYATYCEENTGIINLPEDRQNQLTMDPKSFHPEIKW
HQKEDRLMLNVKLRNFTEHSCKFGHCRVVFSACVGTKLYLANLELKGRILKEKSSCVIKN
EEPVIILFKEEKGEWSSLLKFKNPNVTFDFNYLEEVADDVTLPIWRDIRRNEKQVVMEPI
IDDYDSLTSTNDSSEEDY
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaattttcatcatcaaggtggaagaccctagctgtttctgggggcgaataaca
aatggtttcagtgatctggttgaaaatgcaaaccagtatcaaagattggaggaaaagatg
aatcaagtctacaacagaagagatgaagattcagaagaaattaaacttgcggttctagaa
caggggcagatttgtgctatatactgccatgaactacgttgctggtgcagggcaatactt
gaatctcttgtatcaagtggaagtagttaccttgcagagtgtttcctagttgactacgca
aaacacattctggtgaaagcaaatgatgtacgaagagcagttgatgtcttttggaaactg
ccataccgtgctaaaaagtttacattgtttggcatacagccaatgaccttgcatgttgat
gtttgtgaagagaaagcaaaaattggcccagcagtaagatgggacagtgccgcaatacag
tatttccaaaaaatgtcccgagaatctgatgttgctgaagcaaaattacaaagtgtgact
ggggatacctttgcagttcaattatacctctcgctaaatgatgaaaaggtgtgtctgaat
gatgatttggtagcgaaattctttgcatgttacgtttcacccaaaagtatggtgaaaagt
ctgaattcttcatcagaaatcacttcagcactatgtcagaagaaggaagcacctgttaag
aagaatgtaggccacgcagcattggctctttggtctgagacagtgcaaggaaatgttcgt
acaacattaaaccaaggtcctgctgtccaaaagttagttactcaatgtctacaatcccaa
gaaagagtattcagcgaaaatataaataaacaatacaccaagacagctgtatcgttatcc
aacagaaaatcaacagagtcactcgcaagcttttccttctgttcttcggaaaaagaatta
gattgcaagagagcaaggttttatcctcgtgatgaaatgagaatggacagggacacctcc
aaggcgatgcaggaatgtgatgaaataccagctgctagaagttatgtatttattccattt
attattaaacttctacaatttctaaatccagatccattgaactcaaaaaacgaactcgaa
cttaatttccaacagccatcctacaaaatggcttttgacctctgcaatggagtcttggtg
cactcactaatcaaactgagaccttgtcggagcatggaaatgtcacctatttctctggat
ttaaaaaaggaactgtgcaagaaaaaaattgttcgtccaaatgttgtgcaagcttactgt
tggcctgctataggccgtggttgtgacttgattgcagtttcgcagaaaggagatgatcct
cttctgtacctccctccattgttgacgtttttacaattaccatccatgtataactatcaa
cccaggcgaaatttgccattagcaataattgtttgccctggacgacagaaggcccatttt
gtgtaccagatgttaactgatttaataagaacttcccgaccgctttctctatccttggtt
ttggttggacaggatccagaagaaatcaagaaaataaagtttaccaaaggatgtgatgta
gttgttactactccacacagtttggtacgtgtccttcaaatacactgtctatttttcatt
agactcagccatttggtattggatagagttgatgtacttttcgatgaagcaatggatgaa
atgaataccatcttgcaatgcttcaaggaagctactaatgttccagaaagagggtcaact
ccacaacagctcattgctgttggacaactttggtcaaaaaaaatggaaagtttattgaaa
gaaaatcgaagtgatccttatgttgttataactgccatggaggaagctgctctgtatgga
aatgtccatcaggttgtaaaagtttgtctggactgtgagaaaacatcatttttgctgacc
atgttggacttcacctctgaaattttgcagaagactgttatctttgctaattgtactgag
gaagtggatcatgtgttcaaggctttaggcagtaattcacatttctgcatgaaggtccac
gaaggaatgagcttacaggtcaacaatataatggacgattggagtaagaaattcaaccct
ggcacacatgtgatattagttacgactgataactgcctgagagtcttgaggattacagat
gctacctgtgtaattcattatggttttccttcatcttgtgagatatttggaactcgtcta
tgttgtatggttgacaattttgataatctgactatggaggggccaactcgtcaaggtcag
tcagttgtactgcttactgaaaaagatgcactacaaacagtttccgtcctgcactacttg
gaaagaacagaagctaaaattcctcaagaattatttcaatttattttgaacatgaataac
ctagatgacatttactatgacagagccttatgtaaataccttaaagcatatggaatatgc
agggataataagacatgcccaagtcgtcacaagtttcttcacgatgtagacaaaccacgg
tatctgacagctgaaaagaaattgccttccaccgggtacattgagattattccaacatgt
gtcaatgacgcttcaggttattatggcagaataatacatcacagaagtaaatgggaggat
ctccctgtatctatggaagaggactatctgatgcttttgaaagacatgactgattactat
ttggaggatgaccacaggaaaccagtagaacaattagaagtttctgccttctatggatta
gaggagaacagctatagcagggtgcagttactagcattgccagagaaagctgaaagtgca
gttctcaggagtgcaagagtgaaatacatcgacagtggtcaaactggactagtgatgcag
aaacagctgctcaaacttcctgccaaatttcaggttctgccaccacaggttgttgaattt
ataatatgtagagtaaagcctattgacaatgaaatggactggaatccacaggtttccaga
tatattaaacaaaagatcaccaataaatcacatgaagccaaaattgttcttgctcttggt
aacactctatggctgaatcctgtagtacgtatggctaaattagctgatctgaaaaccaca
atattagagtacaacattcgttcacaaatcatgaattctggatttggcactgataatgca
gagcacattgaaagattgaaaggtctctgcagggtagctggacttggtttgcccaatgag
gattctcccttgaaacagctacattatgataacaagttagaacatgtcactctccagaat
gatggaaactaccattcagttgtcatttctgaattttctagtccaaagaaatttcatgtg
caattagtggcaacaagggaagcgttttgtgctttcgaaaatgaaattaaccaaaaagtt
atggaaaagaaaacatttattttcaatacttccatgccaactgttggtgacttgtgcttg
gcattctgtgaaacagaaaagaggtggcatcgagtgaagatcttgtcaattgttgattcc
aaaaggatttatgaagtgttctttatggattttggaacatgcagctatatttctttgaac
aacattcaaccactattgaaagatgcccttaagcttccttttcaggccatctgctgttca
ttatttggtgtggagcccatggaaaaactctgcagtcaggagattaaagagtggtcctgc
acttctttgcaggataaggaactccaagtgaaagtaattgaacaaagtagaaatgatcta
actgataccatatgctattatgttgttgtgcgagatccctctaatgctggctctgaaaaa
ctggcagaacagatgctatctaaaggacaaggcatcgggccacctgcaattttaaaccaa
ttgttttcagaagaagttgtggaaagtaaagaaaccagctacatttcatacctctgttct
ttggtttgtgcacttttaggagatcagaattcatcatcattaagaaccacaatagtggag
gaactccaaaacaatgtgctacaatattctgcagaaagtgcatcagaatcaggtttacat
ttcctatgcaggttgctcagattcctgacttttccaaaagaacaagctgatgtaataatt
gcaaaagctcatttgatcaggatgcaagtaagagatctggatgaaatcaaagaagagaaa
ggaatttatgtacttgtgaatttacttcagggtgtgactagtgcagaactgcaggaaagc
acatgtgttgcacttggaattctaagtgaaaacaccgacctgcgcattcctataattgat
gccaatgcattgaagtacttttaccaattattgaaaatgccaattgaaactaatgtgtgg
gaagctattcttggagctttagatgcacttctttgctctagcagagtttgtgaagaaatt
gaacagcaagagattatatgtcacccttgtgcgaagattgaacaatcttcaaaggataag
gttttggaaaacgttttgaaggttttgtgttacctcagtggaagaccacagagtctgaat
ttaaatgtattgagtggacttgtttcaactattgacagcctgttagtacacaaaaccagc
aagactgctttgtataaagtagcaaacaatttgaaatcttcactggccattttgcaaact
ttacactgcccacaatatgcaacctattgtgaagaaaatacaggcattatcaatcttcct
gaagacagacagaatcaattaacaatggatcctaaaagctttcacccggagatcaagtgg
catcagaaggaagaccgtcttatgctaaatgtcaagttgcggaattttacagaacattca
tgtaaatttggtcattgcagagtagtattcagcgcctgtgttggtaccaaattatatttg
gcaaacttggaacttaaaggcaggattttaaaggaaaagagctcatgtgtaattaaaaat
gaagagcctgttataatactgttcaaagaagagaaaggtgaatggagcagtttgctgaaa
ttcaagaatccaaatgttacctttgatttcaactacctcgaagaagtggcagatgatgta
actcttccgatttggagggatattagaagaaacgagaaacaagtagtaatggaacccatc
attgatgattatgatagtttaaccagtactaatgatagttctgaagaagattactga
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integrated database retrieval system
