KEGG   Chiloscyllium plagiosum (whitespotted bambooshark): 122558848
Entry
122558848         CDS       T08871                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
cpla  Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cpla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122558848 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpla03019]
    122558848 (wdr82)
   03036 Chromosome and associated proteins [BR:cpla03036]
    122558848 (wdr82)
Messenger RNA biogenesis [BR:cpla03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122558848 (wdr82)
Chromosome and associated proteins [BR:cpla03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     122558848 (wdr82)
    COMPASS/SET1 complex (yeast)
     122558848 (wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_1st DSE1_N WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD_LRWD1 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SPT8 PAC11 Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_ACSF4 MinC_C SHKBP1_KCTD3_C
Other DBs
NCBI-GeneID: 122558848
NCBI-ProteinID: XP_043563625
LinkDB
Position
18
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENTDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFHGHSKRVVALCMSPVDD
TFMSSSLDKTIRLWDLRSPNCQGLMHLQGRPTCSFDPEGLIFAAGVNSEIIKLYDLRSFD
KGPFATFKMQYERTCEWTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFGGYNNNKG
ISLEASFTPDSQFVMIGSEDGKVHVWNAESGLKVAVLDGKHTGPVSCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggataatgtgctgcgcagcttccgagtggctaaggtgttccgagagaac
acggacaagatcaactgcttcgacttctcacctaacggagagacgctcatctccagcagc
gacgatgactccatcgtcctttacgactgccaagagggcaaaccaaagaggacactgtac
agtaagaagtatggggtagacctgatcagatacacacatgcagcaaatacagtggtttac
agttctaacaaaattgatgataccatccggtacttgtcacttcatgacaacaaatacatt
agatatttccatggtcacagcaaaagggttgtagcattatgtatgtctcctgtggatgac
actttcatgtccagttccttggataaaaccattagactgtgggaccttcgatcacccaat
tgtcagggattaatgcatcttcaggggaggccaacatgttcttttgatcctgagggactt
atatttgcagctggtgtgaattctgaaataattaaactttatgatctacgatcatttgac
aagggtccttttgccacttttaaaatgcagtatgagcggacatgcgagtggacaggactg
aaattcagcaatgatggaaaactgatgctggtgtctaccaatggtggtatggtcagactc
atcgatgcatttaaaggagcagtacttcaaacatttgggggatacaacaacaacaaaggt
attagtttggaagcatcattcacaccagattctcagtttgtgatgataggatctgaggat
ggtaaagttcatgtgtggaatgcagaaagtgggttaaaggtggctgttttggatggaaag
catacaggtcctgtctcttgcctccagtttaatcccaaatttatgacatttgccagtgca
tgttcaaacatggcgttttggctacctacaattgatgactga

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