Chiloscyllium plagiosum (whitespotted bambooshark): 122558919
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Entry
122558919 CDS
T08871
Symbol
stab1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122558919 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpla00536
]
122558919 (stab1)
Glycosaminoglycan binding proteins [BR:
cpla00536
]
Hyaluronan
Cell surface receptors
122558919 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_Teneurin
FXa_inhibition
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
122558919
NCBI-ProteinID:
XP_043563808
LinkDB
All DBs
Position
18:complement(18911826..19185694)
Genome browser
AA seq
2588 aa
AA seq
DB search
MESVSLWRLAALGLFLLLTQCPQSTTAQNGKKRQKCNEQMKLTTATACTSCAISQNLLCP
RGFQKITQDFGIRDCSFTVDLGGEQLIRQVGCRHLCTKTATIFKCCTGFWSQDCLECPGG
STNPCNGHGICLDGVSGNGTCICEPKYKGSVCEECADEEAYGPDCVLGCRCVHGICSNGI
TGNGKCICFSGYTGPQCDQEHSACKSLQCGKNTQCVEETKGTFTCKCLPGFLKSERTCKA
IDPCTTNICDKNADCEHLGEGKYKCTCHLNYRGNGKICLPINPCSVDNGGCPENSTLCMY
EGPGKSSCKCKDGFVATNSSQSCILKDVCKPSLCNKTAKCVTVSPGNFECVCKPDEIGDG
RKCIGSIREVIQKLITNQYSTVSLQMFENGCTSTLSNMGPFTVFLPLVKKLKNNQVIDTK
KFSCKQHIVPGVLLLEDFKNITTFETLTGDTVEVTQTRKYFQLIFQNKRYNIMRGNKAAS
NGIIHTIDRFLSGNVEKLGDPQKTVADILAAGQLFSRFETILENCDLPFILDGPGPYTVF
VPSNDAVDKMRDGTLFYMFGEGRPKLQELVKHHIFASGNLPADRLSTMPRILTKANQIIS
INVTINGQILLGDKGVPLQKRDIIASNGIIHTLDGILIPPSILPILPKRCDEIHYRIITA
PCGDCSSLNESHCPEGSTPMETYVQNCVYDKSIDDVIYSRNSGCARHCNQTIVKPGCCKG
FFGPDCKPCLGGFKNPCYGHGQCLDGLEGDGSCKCYSSFKGIACHICSGDNKHGENCDQD
CPCLHGICDNRPENGGICQPGTCDEGYTGTFCDKETESCGPSGLSQFCHAFAVCEYDNGS
ARCVCKNGYEGDGISCREEDLCKKPDRGGCAENAECFSLGPGNITCLCNTGWTGDGRVCT
EINECLLNTRGGCDDNADCQYIGPAQSRCTCKRGYAGDGKKCTLINPCLEENGGCHVMAE
CEPTENGNRKCTCLKGYAGDGIKCFGDILTELASSAYFSGFNNWLKKSLHSMEFPAGANM
TVLVPSETAINNMEKAAIESWEQTDRLLSIVKSHFIMGRLAVDDLKEYEGQKLPTMNIFT
RLLIKNENGNLTIGGARIVIRNIPAVNGYIHIIDKILFPPSEDLPPLLPSLLDLLERLPQ
YSHIKQLLQRYHLIDEIESSEQYTILIPEDTSIEEYCRAKDIEQLDVNAVQYHIILGEKF
LYNKIKDGIHRGTMLGSSYQVIFYTKEDKIFVNDVTLNGFHNETRNGILLGTSQVLQMQK
NRCDINNTVIVEGVCGSCDDNPICPQGTIAMEFAGQIRTETCFYKEFQNDKDAELLGCKP
SCVKETITLKCCFGYFGPMCQMCPGKPDSWCSNFGICQDDINGTGECLCHEGFQGTACES
CEAGRYGPSCELECLCVNGKCNDGLNGDGTCNCFKGWRGINCDVGIVNDYCNGTCHPNAN
CLPGSPDSLASCICSAGYTGNGTYCSEINLCEVNNGGCSVHSNCTKVSAGERMCTCHDGY
VGDGLICLEIDGCTEGNGGCHEKAECTKTGPKRVACNCFPGYSGDGRNSCVPINPCEKNN
GDCGPFANCEATGPGIRKCICKRNYIKVGLSCRGKISQELVRKSDAALFYKYLQANDIKE
LNGKGPFTVFVPRPDTLTQDNTMEEWKTRGLIGDLLRYHIVGCGKLLYDDLRKHSSLVAL
SGNAIRISWKQNAIYLNGDAQIITSDYLATNGIIHYINKILVPYNLTSTNRLVTQPLHNI
STVANANGYKIFSTLIKETNLLPLLEDPIHRPFTMLWPTDEAFSSLPKERKDWLYSNENR
HNLVAYLKFHMIRDSKTLAADLPLISSRRTMRGSLISVRCSRTIIGDLIVNDGSAQIVQR
HLEFDGGIAYGINSLLEPPHIGARCDALTMHPARGPCGSCLNPPACPLGTKPQDGTDYQS
CWYNQANKPSRHLREQFSDRINTAAFPFKLIRGKWVRQGHLHAIRGCSRQCVNPLWIPQC
CKHHYGPYCQVCPGGIQSPCSSHGSCNDRRLGNGTCQCSVGFSGTACELCETGRYGPNCK
KCNCTGNAICDEGISGAGTCFCREGWTGKYCETRFAVKSVCSPKCDRNAVCRSDNICECN
PYYKGDGRKCTVVDRCKNNNGGCHQYAACSQSGINITCTCQPGHEGDGYFCSPIDRCVDG
RNGGCSEHAICINIGPNKRRCECKEGFRGDGIQCLVNAKPPRDRCLERNLCHPNAFCNDL
HFQDKTAGVFHLQSSIGKYRFTFEGATAACNAEGATLASFDQLATAQQFGYHLCVIGWMA
DKKAGYPTTHINPNCGSNKIGIMDYGVQTNLSALWDAYCFREQDIQCVCKEGFVGDGYSC
NGNLVEVLSSNSNFSVFYSKLLDYANATEEGMKFLEFLSNETTNETLFVPLDSGFRVNET
LSWRDLENHISRNNSFIYYDELSADTPISSRLGYDLLIDETGPANQTLFNGSKLVNGRHI
MEWDLVASNGIIHVIEGPLITPHPVLVSANLSNGVLGATLLLGLGCLIAAIVGVSFCLRR
RREIFQFQYFKANDDDGIGLSAEDNPALVSVPNPVYGAYGIVTDSTTEPFEDNDEYEYYS
DTQNILQD
NT seq
7767 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgtcagtttgtggcgtttggcagcactggggttgtttctgttgctcactcag
tgcccacagtctacaacagcccagaacggaaagaaacgtcaaaaatgcaatgagcagatg
aagctgacgacagccacagcctgtacctcctgtgcgataagccaaaatctcttgtgtcct
cgaggcttccagaagatcactcaagacttcgggatcagagactgcagttttactgtggac
ctgggtggagaacagctgattcggcaagttggttgcagacacttatgcacgaaaacggcc
acaattttcaaatgttgtacaggattctggagccaggactgcctagaatgccctggtggg
tcaacaaatccttgcaatggacatggtatatgtttggatggagtttcagggaatggaacc
tgcatttgtgagccaaagtacaaaggaagtgtctgtgaggagtgtgcagatgaggaagct
tacggccctgactgtgtcttgggatgcaggtgtgtacatggaatctgcagcaatgggatc
actggaaatggaaagtgcatttgcttttctggttacactgggccacaatgtgaccaagag
cattctgcttgcaagtcactgcaatgtggaaaaaacacacagtgtgtcgaagaaacaaag
gggacattcacctgcaagtgtctgcctggttttctgaagtctgaaaggacctgtaaggca
atagatccatgtactacaaacatctgtgacaagaatgcagactgtgaacaccttggtgaa
ggaaaatataaatgtacctgtcatcttaactatcgtggaaatggaaagatttgtttacca
atcaatccttgtagtgtagataatggtggttgtccagaaaattctacattgtgcatgtac
gagggaccagggaagtcttcttgcaagtgcaaggatggatttgtcgccacaaattcttca
cagagttgcatcttgaaagatgtttgcaagccatcactctgtaacaagacagcaaagtgt
gtaactgtgtcaccaggaaattttgagtgtgtctgtaaacccgatgagattggagatggc
cgtaaatgcattggctccataagggaggtgatccaaaaacttatcaccaaccagtacagc
actgtgtcacttcagatgtttgaaaatggatgtacatcaacattgagtaacatgggaccg
tttacagtctttcttcctctagttaagaaactaaaaaacaaccaggtaattgataccaag
aagttttcatgcaagcagcacattgtacctggtgttttactacttgaggactttaaaaat
attacaacctttgaaacattgactggtgatacggttgaagtgacccagacaagaaagtac
tttcagcttatatttcaaaataaaaggtacaacatcatgaggggcaacaaagcagcatcg
aatggtatcattcatacaattgaccggtttttatctggaaacgttgaaaaacttggggat
ccacagaaaactgttgctgatattcttgctgcaggacagttgtttagtaggtttgaaacc
attcttgagaattgtgatctccctttcatactggatggccctggtccttacacagtcttt
gtgccaagtaatgatgcagtggacaagatgagagatggaacattattctatatgtttggt
gagggtcggccaaaacttcaagagcttgtgaaacatcatatctttgcatctggcaatttg
ccagcagacagattgtcaacaatgcctcgaatcctgacgaaggcaaaccagataatatct
atcaatgttaccattaacggccagattttgttgggtgacaagggagttcctttacagaaa
agagatattattgcttcaaatggcatcattcacactttggatggcatccttattcctcct
tcaattcttcccatcttgccaaaaagatgtgatgaaattcactaccgcataatcacggct
ccttgtggagactgttcctcattgaatgagagtcattgcccagagggaagcacaccaatg
gaaacatatgtacaaaattgtgtgtacgataagtcaattgatgatgttatctatagtcgg
aactccggttgtgctagacactgcaaccagaccattgttaaaccaggatgctgtaaggga
ttctttggtccagattgcaagccttgcttaggtggttttaaaaatccatgttacggacac
ggacaatgccttgatggcttagaaggagatggctcatgcaagtgttattcaagttttaaa
ggaattgcctgtcacatttgttctggggataacaaacatggagaaaactgcgaccaagat
tgcccttgtttgcatggaatttgtgataacagaccagaaaatggagggatttgtcagcct
ggtacttgtgacgagggatatacaggtacattctgtgacaaggagacggagtcttgtggt
ccaagtggattatctcaattctgtcatgcatttgctgtgtgtgaatatgacaatggcagt
gccagatgtgtatgtaagaatggctacgagggtgatgggatttcctgtcgagaagaggat
ctttgtaaaaagcctgatcgaggaggatgtgctgagaatgcagagtgtttcagtctaggt
cctgggaatataacctgcctatgcaacactggatggactggagatgggagagtttgcact
gaaataaatgaatgcttattgaacacccgaggaggttgtgatgataatgctgactgtcag
tatattggacctgcacagagtcgctgtacgtgtaagagagggtatgctggtgatggcaag
aagtgcactctcattaatccatgcctggaagagaatggtggatgccatgtaatggctgaa
tgtgaacctactgagaatggaaatcgaaagtgtacctgccttaaaggctatgctggagat
gggattaagtgctttggagacattctaacagagcttgcatcaagtgcctacttttcagga
ttcaataactggctcaagaagtccttgcatagtatggaattcccagcaggagctaatatg
actgttctcgtgccatcagagactgccataaacaacatggagaaggctgccattgaatct
tgggaacagacagacagattactgtccatagtcaagtcacattttattatgggtagactt
gctgttgatgatttaaaggaatatgaaggacagaagttaccaacaatgaacatatttacc
aggttattaatcaagaatgaaaatggcaatctgacaatcggtggggcaagaattgttatt
cgcaatatccctgcagtaaatggatacattcatattattgataagattttattccctcct
tcggaagacttaccaccacttctacctagtttgcttgatcttctggaacgactgcctcaa
tactctcatatcaaacaattattacagcgctatcacctaattgatgagatagaatcatct
gaacagtacactattctaataccagaagatacatcaattgaagagtactgcagagctaag
gatattgaacaactggatgtcaacgctgtgcagtatcacattattcttggggagaagttc
ctatataataaaattaaagatggaattcataggggaactatgcttggatcatcctatcaa
gtaatattctacactaaggaagataagatttttgtaaatgacgttacattaaatggtttt
cacaatgagacgagaaatggaatcttgttgggaacaagtcaagttcttcaaatgcagaag
aatagatgtgacatcaataacactgtaattgtagagggagtatgtggcagctgcgatgat
aatcccatctgtcctcaagggacaatcgcaatggaatttgctggtcaaattagaacagag
acctgcttttataaagaatttcaaaatgacaaagatgcggaacttcttggctgcaagccc
agctgtgtaaaagaaaccataactttaaaatgctgttttggatattttggaccaatgtgt
cagatgtgccctgggaaaccagattcttggtgctccaattttggtatttgtcaggacgat
atcaacggaactggagagtgtctgtgtcatgaaggatttcaagggactgcctgtgaatct
tgtgaggctggcagatatggaccgtcttgtgaactggaatgcctgtgtgtaaatgggaag
tgtaatgatggacttaatggtgacggaacttgtaactgcttcaagggttggagaggcatt
aattgtgatgttggaattgtaaatgattactgcaatggcacttgccatcccaatgctaat
tgccttccaggatcacctgactctctggcctcctgcatctgttctgctggctatactgga
aatggaacatactgctcagaaattaacctctgtgaggttaataatggtggctgttcagtg
cactccaactgcactaaggtttctgcaggagagagaatgtgcacctgtcatgatggctat
gttggtgatgggctgatttgtttagaaattgatggttgcacagaaggaaatggtggttgt
catgaaaaagcagaatgcaccaaaacaggaccaaaacgggttgcctgtaattgtttccct
ggatactctggagatggtagaaattcctgtgtacccatcaatccttgtgaaaagaacaat
ggggactgtggcccatttgccaactgcgaggcaacagggccaggaatccgaaaatgtatc
tgcaaaaggaattacattaaggttggactttcttgtcgaggcaaaatttcgcaggaactt
gtccggaaatcagatgctgctttgttttacaaataccttcaggcaaatgacatcaaagag
cttaatggtaaaggaccattcacagtgtttgtgccaagacctgacacacttactcaggat
aacacgatggaagaatggaaaacacgtggtttgattggagatttgcttcgatatcacata
gtcggctgtgggaaacttctctacgatgatctaaggaaacacagttccctcgttgcttta
tctggaaatgccattcggatctcctggaaacagaatgcaatttacttgaatggagatgca
cagatcatcacctctgactaccttgcaacgaacggaattatccattacatcaacaagatc
ttagtcccatacaacttaacatctactaaccgattagtcacacaacctctgcacaacatc
agcacagttgcaaacgctaatggatacaagatttttagtactttgatcaaggaaactaat
ctgctacctctactggaagatccaatccacagaccattcacaatgttgtggccaacagat
gaagcttttagttctcttcctaaggaaaggaaagattggctttatagtaatgaaaacaga
cacaaccttgtggcatacttaaaatttcacatgatcagggattcaaagactttagcagca
gaccttccactcattagcagcaggaggacaatgcgaggatcacttatttcagtccgttgc
agtaggactataattggagatctgattgtgaatgatggaagtgctcagattgttcagaga
cacctggaatttgatggcgggattgcatatggcatcaatagtctcttggaacctccacat
ataggcgctcggtgcgatgcacttacaatgcaccctgcccgtggtccctgcggtagttgt
ttgaatcctcctgcctgtcctcttggaacaaaaccacaggatggcactgattaccaaagc
tgttggtacaaccaagcaaacaagccaagcagacaccttcgggagcagttcagtgatcgg
atcaatactgctgcatttccctttaaactgatccgaggaaaatgggttcgtcaaggtcat
ctccatgcaatacgtggttgcagcagacaatgtgttaatcccctgtggattcctcagtgt
tgcaaacatcattatggcccttattgtcaagtgtgccctggaggaatacagtcaccttgt
agttctcatggaagttgtaatgatagaagactcggaaatggaacatgccagtgctcagtg
gggttcagtggaacagcctgtgaattgtgtgaaactggtagatatggaccgaactgcaaa
aaatgtaattgcacaggaaatgcaatctgtgatgaaggaatttctggtgctggaacttgt
ttctgtagagaaggatggactggaaaatattgtgaaacaagatttgctgtaaaatctgta
tgttccccaaagtgtgatcgcaatgctgtttgcagaagtgacaacatctgtgagtgtaat
ccatactataaaggtgacggaagaaaatgtacagtggtcgaccgctgcaagaacaataat
ggaggctgccaccaatatgctgcctgtagtcaaagtgggattaacataacctgcacttgc
caaccaggacacgagggtgacggctatttctgtagccccatagatcgatgtgtcgatggc
aggaatggtggatgcagcgaacatgcaatatgcattaatattggaccaaacaaacgaagg
tgtgaatgcaaagaaggattcagaggtgatggtatccaatgtttagtaaatgccaaacca
ccgagagatcgttgtcttgaaaggaatttatgtcatcctaatgccttttgcaatgatctc
cattttcaagataaaacagctggagtattccatttgcagtcatccattgggaaatataga
tttacctttgaaggtgcaacagctgcctgcaatgctgagggggctactctggcaagtttt
gatcaacttgctactgcccagcagtttggttaccacctttgtgttattggatggatggcc
gataagaaagccggatatcccacaacccatataaatcctaactgcggctccaataagatt
ggtataatggattatggagttcagactaatctcagtgctctttgggatgcttactgcttt
agagagcaagatattcaatgtgtatgtaaggaaggctttgtgggtgatggttattcctgc
aatgggaaccttgtggaagtgctttccagtaactccaatttttcagtcttttattctaaa
ttgttagattatgccaatgcgactgaagaaggaatgaaattcctggaattcctatcaaat
gagacaaccaatgaaactttgtttgtgcccttagattctggttttagagtaaatgagacc
ttgtcatggagggatcttgaaaaccatatctctagaaacaatagttttatctactatgat
gagttgagtgctgatacacccatttcatccaggctgggatatgatcttcttattgatgaa
actggacccgcaaatcagactctcttcaatggctcaaagctggtgaatggccggcatatt
atggaatgggatttagttgccagcaacggaattatacatgtcatagagggacctttaata
actcctcatccagttttggtttctgcaaatttatccaatggtgtccttggagcaacctta
cttctaggactgggatgtttgattgccgcaatagttggagtgagtttttgtctccgacgc
aggagagagattttccaatttcagtacttcaaggctaatgatgatgatggtataggcctc
agtgcagaggacaatcctgctctggtttctgtgccaaatccagtgtacggagcatatggt
atagttacagatagcaccactgaaccatttgaggacaatgatgaatatgaatattattca
gacacacagaacattctacaggattga
DBGET
integrated database retrieval system
