Chiloscyllium plagiosum (whitespotted bambooshark): 122558936
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Entry
122558936 CDS
T08871
Name
(RefSeq) POC1 centriolar protein homolog A-like isoform X1
KO
K16482
centriolar protein POC1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122558936
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122558936
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122558936
Cilium and associated proteins [BR:
cpla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122558936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_Nup120_160
eIF2A
Beta-prop_NWD2_C
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_WDR75_2nd
Cytochrom_D1
Beta-prop_NUP159_NUP214
Nucleoporin_N
Beta-prop_ACSF4
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
122558936
NCBI-ProteinID:
XP_043563847
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Position
18:21519142..21635722
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AA seq
433 aa
AA seq
DB search
MKQLATGSMDCCVMIWNLKPQMRAYRFVGHKDAVLSVQFSPSGHLLASASRDKTVRLWVP
SVKGESTVLKAHTGTIRSVQFSRDGQSLVTASDDKTIKVWTVHRQKFLFSLTQHINWVRC
AKFSPDGRLIVSASDDKTIKIWDKATRECIHSFYEHGGHHGLMATVWAPGRVDSQLREPQ
GEARFVNYVDFHPNGTCIAAAGADSTVKLWDIRTNKLLQHYRVHSAVVNSLSFHPNGNYL
ITASNDSTLKILDLLEGKLLYTLHGHQGPASCVVFSGAGDFFASGGSDEQVMVWKTNFDA
ADYGEMLKNQSQPMTVNCRLKNCDGPSWLPDDTTKSHAVETVLETNVSDTGSTNLNQQKN
DSSNVLASDEKPIPHLSQFHQQEGNGIPSALASTLEHIVGQLDVLTQTVTILEQRLTLTE
DKLREYLDKQQTS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttagcaactggatcaatggattgctgcgtcatgatctggaatttgaaacca
cagatgcgagcatatcgatttgtaggtcacaaagatgcagtcctgtcagttcagttctct
ccttctggtcacttactggcttctgcatctcgagacaaaacagtccgcctctgggttccc
agtgtaaaaggtgaatcaacagtgttaaaggctcacacaggaaccattcgaagtgttcag
ttctccagagatggacagtcattggttacagcttcggatgacaaaaccatcaaagtttgg
acagttcatcggcagaagtttcttttttctctcacccagcatataaattgggttcgctgt
gcaaagttttcaccagatgggcgactcattgtttctgccagtgatgataaaacgattaaa
atttgggataaagctactagagaatgtattcattcattttatgaacatggaggtcatcat
ggacttatggctacagtgtgggctcctggcagagtggactctcagcttagggagcctcaa
ggtgaagctagatttgtgaattatgtagattttcatcccaatggaacatgtattgcagca
gcaggagcagatagcactgttaagctttgggacatacgtacaaacaagcttcttcagcat
tatcgagtgcacagtgctgtggtaaacagcctctctttccatccaaatggaaactatctc
ataactgcctctaatgattcaacactgaagatacttgatttactggaagggaaattactc
tatacacttcatggccatcagggtccagcttcatgtgtggttttctctggtgctggagac
ttctttgcttcgggtggctcagatgaacaggttatggtatggaagactaattttgatgct
gcagattatggggaaatgttgaaaaatcaatcccaaccaatgactgttaattgtaggctg
aagaattgtgatggtccttcttggttaccagatgatactacaaaatcacatgctgtagag
actgttttggagacaaatgtttctgacactgggtcaactaacctaaatcaacaaaagaac
gattcaagtaacgttttggcatcagatgaaaaacccattcctcacttaagccagtttcat
cagcaagaagggaatggtatcccctcagctcttgcaagtactctggagcacattgtagga
cagctggatgttctcactcagacagtgacgattcttgaacagcgacttacattaacagaa
gacaagctgcgggaatatcttgacaagcaacagacgtcatga
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